RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 CHFRQ96EP1 664 aa6.81□□□□□ -1.32
MSH5-217ENST00000494458 SCRN2Q96FV2 425 aa6.81□□□□□ -1.32
MSH5-217ENST00000494458 LRIG1Q96JA1 1093 aa6.81□□□□□ -1.32
MSH5-217ENST00000494458 MSLNLQ96KJ4 702 aa6.81□□□□□ -1.32
MSH5-217ENST00000494458 TBATAQ96M53 351 aa6.81□□□□□ -1.32
MSH5-217ENST00000494458 KLF6Q99612 283 aaPredicted RBP6.81□□□□□ -1.32
MSH5-217ENST00000494458 OMDQ99983 421 aa6.81□□□□□ -1.32
MSH5-217ENST00000494458 MFRPQ9BY79 579 aa6.81□□□□□ -1.32
MSH5-217ENST00000494458 CERS4Q9HA82 394 aa6.81□□□□□ -1.32
MSH5-217ENST00000494458 PIDD1Q9HB75 910 aa6.81□□□□□ -1.32
MSH5-217ENST00000494458 PPANQ9NQ55 473 aaKnown RBP6.81□□□□□ -1.32
MSH5-217ENST00000494458 HPS4Q9NQG7 708 aa6.81□□□□□ -1.32
MSH5-217ENST00000494458 SNX15Q9NRS6 342 aa6.81□□□□□ -1.32
MSH5-217ENST00000494458 PLK2Q9NYY3 685 aa6.81□□□□□ -1.32
MSH5-217ENST00000494458 IL1RAPL1Q9NZN1 696 aa6.81□□□□□ -1.32
MSH5-217ENST00000494458 SLCO3A1Q9UIG8 710 aa6.81□□□□□ -1.32
MSH5-217ENST00000494458 CDH7Q9ULB5 785 aa6.81□□□□□ -1.32
MSH5-217ENST00000494458 PHTF1Q9UMS5 762 aa6.81□□□□□ -1.32
MSH5-217ENST00000494458 ERVW-1Q9UQF0 538 aa6.81□□□□□ -1.32
MSH5-217ENST00000494458 ANKRD6Q9Y2G4 727 aa6.81□□□□□ -1.32
MSH5-217ENST00000494458 MED16Q9Y2X0 877 aa6.81□□□□□ -1.32
MSH5-217ENST00000494458 FCF1Q9Y324 198 aaKnown RBP6.81□□□□□ -1.32
MSH5-217ENST00000494458 STARD13Q9Y3M8 1113 aa6.81□□□□□ -1.32
MSH5-217ENST00000494458 KCTD3Q9Y597 815 aa6.81□□□□□ -1.32
MSH5-217ENST00000494458 ARL5AQ9Y689 179 aa6.81□□□□□ -1.32
MSH5-217ENST00000494458 WNT6Q9Y6F9 365 aa6.81□□□□□ -1.32
MSH5-217ENST00000494458 CCDC189A1A4V9 331 aa6.8□□□□□ -1.32
MSH5-217ENST00000494458 CCDC162PA2VCL2 907 aa6.8□□□□□ -1.32
MSH5-217ENST00000494458 OTOL1A6NHN0 477 aaPredicted RBP6.8□□□□□ -1.32
MSH5-217ENST00000494458 C2orf81A6NN90 581 aa6.8□□□□□ -1.32
MSH5-217ENST00000494458 HEPACAM2A8MVW5 462 aa6.8□□□□□ -1.32
MSH5-217ENST00000494458 TCP11X1B4DZS4 312 aa6.8□□□□□ -1.32
MSH5-217ENST00000494458 NEDD8-MDP1E9PL57 170 aa6.8□□□□□ -1.32
MSH5-217ENST00000494458 GOLGA8RI6L899 631 aa6.8□□□□□ -1.32
MSH5-217ENST00000494458 RFXAPO00287 272 aa6.8□□□□□ -1.32
MSH5-217ENST00000494458 GAPDHSO14556 408 aaPredicted RBP6.8□□□□□ -1.32
MSH5-217ENST00000494458 CD3EAPO15446 510 aaKnown RBP6.8□□□□□ -1.32
MSH5-217ENST00000494458 LINC01565O15544 149 aa6.8□□□□□ -1.32
MSH5-217ENST00000494458 EDF1O60869 148 aaKnown RBP6.8□□□□□ -1.32
MSH5-217ENST00000494458 GLRA3O75311 464 aa6.8□□□□□ -1.32
MSH5-217ENST00000494458 SNNO75324 88 aaPredicted RBP6.8□□□□□ -1.32
MSH5-217ENST00000494458 NFATC1O95644 943 aa6.8□□□□□ -1.32
MSH5-217ENST00000494458 ADH1CP00326 375 aa6.8□□□□□ -1.32
MSH5-217ENST00000494458 GOT2P00505 430 aaKnown RBP6.8□□□□□ -1.32
MSH5-217ENST00000494458 BPGMP07738 259 aa6.8□□□□□ -1.32
MSH5-217ENST00000494458 DLDP09622 509 aaKnown RBP6.8□□□□□ -1.32
MSH5-217ENST00000494458 SLC35E2BP0CK96 405 aa6.8□□□□□ -1.32
MSH5-217ENST00000494458 TYK2P29597 1187 aa6.8□□□□□ -1.32
MSH5-217ENST00000494458 SLC8A1P32418 973 aa6.8□□□□□ -1.32
MSH5-217ENST00000494458 GBP2P32456 591 aaPredicted RBP6.8□□□□□ -1.32
MSH5-217ENST00000494458 VIPR2P41587 438 aa6.8□□□□□ -1.32
MSH5-217ENST00000494458 CD151P48509 253 aa6.8□□□□□ -1.32
MSH5-217ENST00000494458 STC1P52823 247 aa6.8□□□□□ -1.32
MSH5-217ENST00000494458 CTBP1Q13363 440 aa6.8□□□□□ -1.32
MSH5-217ENST00000494458 PEX6Q13608 980 aa6.8□□□□□ -1.32
MSH5-217ENST00000494458 ENPP2Q13822 863 aa6.8□□□□□ -1.32
MSH5-217ENST00000494458 GALNT3Q14435 633 aa6.8□□□□□ -1.32
MSH5-217ENST00000494458 ITIH4Q14624 930 aa6.8□□□□□ -1.32
MSH5-217ENST00000494458 LRRC14Q15048 493 aa6.8□□□□□ -1.32
MSH5-217ENST00000494458 EIF4HQ15056 248 aaKnown RBP6.8□□□□□ -1.32
MSH5-217ENST00000494458 DLG2Q15700 870 aa6.8□□□□□ -1.32
MSH5-217ENST00000494458 ZSCAN26Q16670 478 aa6.8□□□□□ -1.32
MSH5-217ENST00000494458 GEN1Q17RS7 908 aa6.8□□□□□ -1.32
MSH5-217ENST00000494458 LRIT3Q3SXY7 679 aa6.8□□□□□ -1.32
MSH5-217ENST00000494458 CCDC153Q494R4 210 aa6.8□□□□□ -1.32
MSH5-217ENST00000494458 SETMARQ53H47 684 aaPredicted RBP6.8□□□□□ -1.32
MSH5-217ENST00000494458 ZNF789Q5FWF6 425 aa6.8□□□□□ -1.32
MSH5-217ENST00000494458 TCEAL5Q5H9L2 206 aa6.8□□□□□ -1.32
MSH5-217ENST00000494458 PPM1JQ5JR12 505 aa6.8□□□□□ -1.32
MSH5-217ENST00000494458 ATXN7L2Q5T6C5 722 aaPredicted RBP6.8□□□□□ -1.32
MSH5-217ENST00000494458 CES4AQ5XG92 561 aa6.8□□□□□ -1.32
MSH5-217ENST00000494458 TANGO2Q6ICL3 276 aa6.8□□□□□ -1.32
MSH5-217ENST00000494458 C22orf39Q6P5X5 142 aa6.8□□□□□ -1.32
MSH5-217ENST00000494458 ZNF549Q6P9A3 640 aa6.8□□□□□ -1.32
MSH5-217ENST00000494458 DPY19L3Q6ZPD9 716 aa6.8□□□□□ -1.32
MSH5-217ENST00000494458 KDELC2Q7Z4H8 507 aa6.8□□□□□ -1.32
MSH5-217ENST00000494458 YTHDF3Q7Z739 585 aaKnown RBP6.8□□□□□ -1.32
MSH5-217ENST00000494458 ZSWIM9Q86XI8 627 aa6.8□□□□□ -1.32
MSH5-217ENST00000494458 SPATS2Q86XZ4 545 aaKnown RBP6.8□□□□□ -1.32
MSH5-217ENST00000494458 CAMK1DQ8IU85 385 aa6.8□□□□□ -1.32
MSH5-217ENST00000494458 CEP97Q8IW35 865 aa6.8□□□□□ -1.32
MSH5-217ENST00000494458 CENPLQ8N0S6 344 aaPredicted RBP6.8□□□□□ -1.32
MSH5-217ENST00000494458 PLD6Q8N2A8 252 aaKnown RBP6.8□□□□□ -1.32
MSH5-217ENST00000494458 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.8□□□□□ -1.32
MSH5-217ENST00000494458 ANKRD42Q8N9B4 389 aa6.8□□□□□ -1.32
MSH5-217ENST00000494458 OR13C4Q8NGS5 318 aa6.8□□□□□ -1.32
MSH5-217ENST00000494458 OR4L1Q8NH43 312 aa6.8□□□□□ -1.32
MSH5-217ENST00000494458 GABPB2Q8TAK5 448 aaPredicted RBP6.8□□□□□ -1.32
MSH5-217ENST00000494458 ZNF398Q8TD17 642 aa6.8□□□□□ -1.32
MSH5-217ENST00000494458 ING5Q8WYH8 240 aa6.8□□□□□ -1.32
MSH5-217ENST00000494458 SUSD6Q92537 303 aa6.8□□□□□ -1.32
MSH5-217ENST00000494458 ELSPBP1Q96BH3 223 aa6.8□□□□□ -1.32
MSH5-217ENST00000494458 DNAJC1Q96KC8 554 aaKnown RBP6.8□□□□□ -1.32
MSH5-217ENST00000494458 EXOC2Q96KP1 924 aa6.8□□□□□ -1.32
MSH5-217ENST00000494458 C12orf65Q9H3J6 166 aaKnown RBP6.8□□□□□ -1.32
MSH5-217ENST00000494458 SUV39H2Q9H5I1 410 aa6.8□□□□□ -1.32
MSH5-217ENST00000494458 ATP13A3Q9H7F0 1226 aa6.8□□□□□ -1.32
MSH5-217ENST00000494458 MANSC1Q9H8J5 431 aa6.8□□□□□ -1.32
MSH5-217ENST00000494458 ECT2Q9H8V3 914 aa6.8□□□□□ -1.32
MSH5-217ENST00000494458 POPDC3Q9HBV1 291 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms