RNA–Protein interactions for RNA: ENST00000494412.1

CMSS1-207, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2

Gene CMSS1, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-207ENST00000494412 SERPINA11Q86U17 422 aa4.3□□□□□ -1.72
CMSS1-207ENST00000494412 METTL23Q86XA0 190 aa4.3□□□□□ -1.72
CMSS1-207ENST00000494412 TMC8Q8IU68 726 aa4.3□□□□□ -1.72
CMSS1-207ENST00000494412 SLC35F3Q8IY50 421 aa4.3□□□□□ -1.72
CMSS1-207ENST00000494412 RNF168Q8IYW5 571 aaPredicted RBP4.3□□□□□ -1.72
CMSS1-207ENST00000494412 FAM185AQ8N0U4 392 aa4.3□□□□□ -1.72
CMSS1-207ENST00000494412 MMP21Q8N119 569 aa4.3□□□□□ -1.72
CMSS1-207ENST00000494412 Q8N1X5 172 aa4.3□□□□□ -1.72
CMSS1-207ENST00000494412 PNLDC1Q8NA58 520 aaKnown RBP4.3□□□□□ -1.72
CMSS1-207ENST00000494412 HUS1BQ8NHY5 278 aa4.3□□□□□ -1.72
CMSS1-207ENST00000494412 KIF18AQ8NI77 898 aa4.3□□□□□ -1.72
CMSS1-207ENST00000494412 DEPDC1BQ8WUY9 529 aa4.3□□□□□ -1.72
CMSS1-207ENST00000494412 LRRC59Q96AG4 307 aaKnown RBP4.3□□□□□ -1.72
CMSS1-207ENST00000494412 FBXL8Q96CD0 374 aa4.3□□□□□ -1.72
CMSS1-207ENST00000494412 ZNF503Q96F45 646 aa4.3□□□□□ -1.72
CMSS1-207ENST00000494412 RRNAD1Q96FB5 475 aaKnown RBP4.3□□□□□ -1.72
CMSS1-207ENST00000494412 RITA1Q96K30 269 aa4.3□□□□□ -1.72
CMSS1-207ENST00000494412 FER1L6-AS2Q96M78 137 aa4.3□□□□□ -1.72
CMSS1-207ENST00000494412 CITED2Q99967 270 aaPredicted RBP4.3□□□□□ -1.72
CMSS1-207ENST00000494412 NAA11Q9BSU3 229 aaPredicted RBP4.3□□□□□ -1.72
CMSS1-207ENST00000494412 HGH1Q9BTY7 390 aa4.3□□□□□ -1.72
CMSS1-207ENST00000494412 EFHD1Q9BUP0 239 aa4.3□□□□□ -1.72
CMSS1-207ENST00000494412 THUMPD3Q9BV44 507 aaKnown RBP4.3□□□□□ -1.72
CMSS1-207ENST00000494412 KRTAP4-5Q9BYR2 181 aa4.3□□□□□ -1.72
CMSS1-207ENST00000494412 FAM129AQ9BZQ8 928 aa4.3□□□□□ -1.72
CMSS1-207ENST00000494412 PAG1Q9NWQ8 432 aa4.3□□□□□ -1.72
CMSS1-207ENST00000494412 ADAM21Q9UKJ8 722 aa4.3□□□□□ -1.72
CMSS1-207ENST00000494412 RAP2CQ9Y3L5 183 aa4.3□□□□□ -1.72
CMSS1-207ENST00000494412 A3GALT2U3KPV4 340 aa4.3□□□□□ -1.72
CMSS1-207ENST00000494412 LOC102723996A0A087X1L8 192 aa4.29□□□□□ -1.72
CMSS1-207ENST00000494412 TRBV5-7A0A0A0MS05 114 aa4.29□□□□□ -1.72
CMSS1-207ENST00000494412 C17orf102A2RUQ5 167 aa4.29□□□□□ -1.72
CMSS1-207ENST00000494412 PSMA7O14818 248 aa4.29□□□□□ -1.72
CMSS1-207ENST00000494412 TADA2AO75478 443 aa4.29□□□□□ -1.72
CMSS1-207ENST00000494412 C22orf31O95567 290 aa4.29□□□□□ -1.72
CMSS1-207ENST00000494412 TPOP07202 933 aa4.29□□□□□ -1.72
CMSS1-207ENST00000494412 CYP2A6P11509 494 aaPredicted RBP4.29□□□□□ -1.72
CMSS1-207ENST00000494412 ACTN1P12814 892 aa4.29□□□□□ -1.72
CMSS1-207ENST00000494412 BMP5P22003 454 aa4.29□□□□□ -1.72
CMSS1-207ENST00000494412 PTAFRP25105 342 aa4.29□□□□□ -1.72
CMSS1-207ENST00000494412 MC5RP33032 325 aa4.29□□□□□ -1.72
CMSS1-207ENST00000494412 SLC16A2P36021 539 aa4.29□□□□□ -1.72
CMSS1-207ENST00000494412 CCR3P51677 355 aa4.29□□□□□ -1.72
CMSS1-207ENST00000494412 SLC12A2P55011 1212 aa4.29□□□□□ -1.72
CMSS1-207ENST00000494412 CSE1LP55060 971 aaKnown RBP4.29□□□□□ -1.72
CMSS1-207ENST00000494412 TMPRSS3P57727 454 aa4.29□□□□□ -1.72
CMSS1-207ENST00000494412 ECT2LQ008S8 904 aa4.29□□□□□ -1.72
CMSS1-207ENST00000494412 NAE1Q13564 534 aa4.29□□□□□ -1.72
CMSS1-207ENST00000494412 CAPSQ13938 189 aa4.29□□□□□ -1.72
CMSS1-207ENST00000494412 ARHGEF6Q15052 776 aa4.29□□□□□ -1.72
CMSS1-207ENST00000494412 USP41Q3LFD5 358 aa4.29□□□□□ -1.72
CMSS1-207ENST00000494412 ESCO2Q56NI9 601 aa4.29□□□□□ -1.72
CMSS1-207ENST00000494412 ENTPD8Q5MY95 495 aa4.29□□□□□ -1.72
CMSS1-207ENST00000494412 PRAMEF19Q5SWL8 479 aa4.29□□□□□ -1.72
CMSS1-207ENST00000494412 FNDC7Q5VTL7 733 aa4.29□□□□□ -1.72
CMSS1-207ENST00000494412 CST9LP1Q5W188 147 aa4.29□□□□□ -1.72
CMSS1-207ENST00000494412 TMEM198Q66K66 360 aa4.29□□□□□ -1.72
CMSS1-207ENST00000494412 CAVIN1Q6NZI2 390 aaKnown RBP4.29□□□□□ -1.72
CMSS1-207ENST00000494412 TRAT1Q6PIZ9 186 aa4.29□□□□□ -1.72
CMSS1-207ENST00000494412 CHSY1Q86X52 802 aa4.29□□□□□ -1.72
CMSS1-207ENST00000494412 CCDC170Q8IYT3 715 aa4.29□□□□□ -1.72
CMSS1-207ENST00000494412 SCYL3Q8IZE3 742 aa4.29□□□□□ -1.72
CMSS1-207ENST00000494412 NUP93Q8N1F7 819 aa4.29□□□□□ -1.72
CMSS1-207ENST00000494412 PARP16Q8N5Y8 322 aa4.29□□□□□ -1.72
CMSS1-207ENST00000494412 ZBTB2Q8N680 514 aa4.29□□□□□ -1.72
CMSS1-207ENST00000494412 LRRC57Q8N9N7 239 aa4.29□□□□□ -1.72
CMSS1-207ENST00000494412 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.29□□□□□ -1.72
CMSS1-207ENST00000494412 CAGE1Q8TC20 777 aa4.29□□□□□ -1.72
CMSS1-207ENST00000494412 PIGOQ8TEQ8 1089 aa4.29□□□□□ -1.72
CMSS1-207ENST00000494412 HARBI1Q96MB7 349 aa4.29□□□□□ -1.72
CMSS1-207ENST00000494412 SEPT5Q99719 369 aaPredicted RBP4.29□□□□□ -1.72
CMSS1-207ENST00000494412 ZNF341Q9BYN7 854 aa4.29□□□□□ -1.72
CMSS1-207ENST00000494412 LHPPQ9H008 270 aa4.29□□□□□ -1.72
CMSS1-207ENST00000494412 MMRN2Q9H8L6 949 aa4.29□□□□□ -1.72
CMSS1-207ENST00000494412 CWC15Q9P013 229 aaKnown RBP4.29□□□□□ -1.72
CMSS1-207ENST00000494412 NDRG3Q9UGV2 375 aa4.29□□□□□ -1.72
CMSS1-207ENST00000494412 UTS2RQ9UKP6 389 aa4.29□□□□□ -1.72
CMSS1-207ENST00000494412 EXO1Q9UQ84 846 aaKnown RBP4.29□□□□□ -1.72
CMSS1-207ENST00000494412 LAMP3Q9UQV4 416 aa4.29□□□□□ -1.72
CMSS1-207ENST00000494412 POMT1Q9Y6A1 747 aa4.29□□□□□ -1.72
CMSS1-207ENST00000494412 POLR2AP24928 1970 aaKnown RBP4.29□□□□□ -1.72
CMSS1-207ENST00000494412 COL4A3Q01955 1670 aa4.29□□□□□ -1.72
CMSS1-207ENST00000494412 ZNF644Q9H582 1327 aaPredicted RBP4.28□□□□□ -1.72
CMSS1-207ENST00000494412 GPR75-ASB3A0A0A6YYF3 556 aa4.28□□□□□ -1.72
CMSS1-207ENST00000494412 A0A0U1RQF3 1178 aa4.28□□□□□ -1.72
CMSS1-207ENST00000494412 A0A1B0GVM2 712 aa4.28□□□□□ -1.72
CMSS1-207ENST00000494412 A0A1W2PR77 199 aa4.28□□□□□ -1.72
CMSS1-207ENST00000494412 TCRBV21S2A2A0A5A6 115 aa4.28□□□□□ -1.72
CMSS1-207ENST00000494412 BICDL2A1A5D9 508 aa4.28□□□□□ -1.72
CMSS1-207ENST00000494412 FOXO6A8MYZ6 492 aa4.28□□□□□ -1.72
CMSS1-207ENST00000494412 AKR1B15C9JRZ8 316 aaPredicted RBP4.28□□□□□ -1.72
CMSS1-207ENST00000494412 NPIPB8E9PQR5 432 aa4.28□□□□□ -1.72
CMSS1-207ENST00000494412 PLRG1O43660 514 aaKnown RBP4.28□□□□□ -1.72
CMSS1-207ENST00000494412 KLK8O60259 260 aa4.28□□□□□ -1.72
CMSS1-207ENST00000494412 UGDHO60701 494 aa4.28□□□□□ -1.72
CMSS1-207ENST00000494412 FTCDO95954 541 aa4.28□□□□□ -1.72
CMSS1-207ENST00000494412 BCL10O95999 233 aa4.28□□□□□ -1.72
CMSS1-207ENST00000494412 WNT1P04628 370 aa4.28□□□□□ -1.72
CMSS1-207ENST00000494412 TGFB3P10600 412 aa4.28□□□□□ -1.72
CMSS1-207ENST00000494412 UNGP13051 313 aaPredicted RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms