RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 GSTM5P46439 218 aa19.2■□□□□ 0.66
COL27A1-207ENST00000494090 EIF2B2P49770 351 aaKnown RBP19.2■□□□□ 0.66
COL27A1-207ENST00000494090 ADGRD1Q6QNK2 874 aa19.2■□□□□ 0.66
COL27A1-207ENST00000494090 CMC1Q7Z7K0 106 aa19.2■□□□□ 0.66
COL27A1-207ENST00000494090 BEND7Q8N7W2 519 aaPredicted RBP19.2■□□□□ 0.66
COL27A1-207ENST00000494090 RHBGQ9H310 441 aa19.2■□□□□ 0.66
COL27A1-207ENST00000494090 FAM105AQ9NUU6 356 aa19.2■□□□□ 0.66
COL27A1-207ENST00000494090 FER1L4A9Z1Z3 1794 aa19.2■□□□□ 0.66
COL27A1-207ENST00000494090 CHURC1-FNTBB4DL54 471 aa19.2■□□□□ 0.66
COL27A1-207ENST00000494090 WWP2O00308 870 aa19.2■□□□□ 0.66
COL27A1-207ENST00000494090 CCNDBP1O95273 360 aa19.2■□□□□ 0.66
COL27A1-207ENST00000494090 CD52P31358 61 aa19.2■□□□□ 0.66
COL27A1-207ENST00000494090 PTSQ03393 145 aa19.2■□□□□ 0.66
COL27A1-207ENST00000494090 BNIP1Q12981 228 aa19.2■□□□□ 0.66
COL27A1-207ENST00000494090 LRP10Q7Z4F1 713 aa19.2■□□□□ 0.66
COL27A1-207ENST00000494090 CPT1BQ92523 772 aa19.2■□□□□ 0.66
COL27A1-207ENST00000494090 C7orf26Q96N11 449 aa19.2■□□□□ 0.66
COL27A1-207ENST00000494090 CSPG4P5Q96PW8 444 aa19.2■□□□□ 0.66
COL27A1-207ENST00000494090 PRDM8Q9NQV8 689 aa19.2■□□□□ 0.66
COL27A1-207ENST00000494090 TBC1D30Q9Y2I9 924 aa19.2■□□□□ 0.66
COL27A1-207ENST00000494090 PGM3O95394 542 aa19.2■□□□□ 0.66
COL27A1-207ENST00000494090 PMF1Q6P1K2 205 aa19.2■□□□□ 0.66
COL27A1-207ENST00000494090 FAM84AQ96KN4 292 aa19.2■□□□□ 0.66
COL27A1-207ENST00000494090 COPS8Q99627 209 aa19.2■□□□□ 0.66
COL27A1-207ENST00000494090 LGALS13Q9UHV8 139 aa19.2■□□□□ 0.66
COL27A1-207ENST00000494090 RAB23Q9ULC3 237 aa19.2■□□□□ 0.66
COL27A1-207ENST00000494090 MFHAS1Q9Y4C4 1052 aa19.2■□□□□ 0.66
COL27A1-207ENST00000494090 C3P01024 1663 aa19.19■□□□□ 0.66
COL27A1-207ENST00000494090 A0A1W2PQ67 120 aa19.19■□□□□ 0.66
COL27A1-207ENST00000494090 LIN7AO14910 233 aaPredicted RBP19.19■□□□□ 0.66
COL27A1-207ENST00000494090 TLR5O60602 858 aa19.19■□□□□ 0.66
COL27A1-207ENST00000494090 PRKAR2AP13861 404 aaKnown RBP19.19■□□□□ 0.66
COL27A1-207ENST00000494090 STAT5AP42229 794 aa19.19■□□□□ 0.66
COL27A1-207ENST00000494090 USP4Q13107 963 aa19.19■□□□□ 0.66
COL27A1-207ENST00000494090 LSM12Q3MHD2 195 aaKnown RBP19.19■□□□□ 0.66
COL27A1-207ENST00000494090 KLHL35Q6PF15 583 aa19.19■□□□□ 0.66
COL27A1-207ENST00000494090 CDYL2Q8N8U2 506 aa19.19■□□□□ 0.66
COL27A1-207ENST00000494090 SLC4A11Q8NBS3 891 aa19.19■□□□□ 0.66
COL27A1-207ENST00000494090 FAM13CQ8NE31 585 aa19.19■□□□□ 0.66
COL27A1-207ENST00000494090 OR4L1Q8NH43 312 aa19.19■□□□□ 0.66
COL27A1-207ENST00000494090 SSU72Q9NP77 194 aaKnown RBP19.19■□□□□ 0.66
COL27A1-207ENST00000494090 GPSM3Q9Y4H4 160 aa19.19■□□□□ 0.66
COL27A1-207ENST00000494090 ANKRD26Q9UPS8 1709 aa19.19■□□□□ 0.66
COL27A1-207ENST00000494090 DHRS12A0PJE2 317 aa19.19■□□□□ 0.66
COL27A1-207ENST00000494090 OR6B1O95007 311 aa19.19■□□□□ 0.66
COL27A1-207ENST00000494090 ECDO95905 644 aaPredicted RBP19.19■□□□□ 0.66
COL27A1-207ENST00000494090 COL6A2P12110 1019 aa19.19■□□□□ 0.66
COL27A1-207ENST00000494090 HADHBP55084 474 aaKnown RBP19.19■□□□□ 0.66
COL27A1-207ENST00000494090 SLC1A5Q15758 541 aa19.19■□□□□ 0.66
COL27A1-207ENST00000494090 IKBIPQ70UQ0 350 aa19.19■□□□□ 0.66
COL27A1-207ENST00000494090 TM6SF2Q9BZW4 377 aa19.19■□□□□ 0.66
COL27A1-207ENST00000494090 FAM124BQ9H5Z6 455 aaPredicted RBP19.19■□□□□ 0.66
COL27A1-207ENST00000494090 VPS4AQ9UN37 437 aa19.19■□□□□ 0.66
COL27A1-207ENST00000494090 MOXD2PA6NHM9 499 aa19.19■□□□□ 0.66
COL27A1-207ENST00000494090 BBIP1A8MTZ0 92 aa19.19■□□□□ 0.66
COL27A1-207ENST00000494090 OR10H2O60403 315 aa19.19■□□□□ 0.66
COL27A1-207ENST00000494090 LAG3P18627 525 aa19.19■□□□□ 0.66
COL27A1-207ENST00000494090 WARSP23381 471 aaKnown RBP19.19■□□□□ 0.66
COL27A1-207ENST00000494090 WNT3AP56704 352 aa19.19■□□□□ 0.66
COL27A1-207ENST00000494090 VSTM1Q6UX27 236 aa19.19■□□□□ 0.66
COL27A1-207ENST00000494090 FAM220AQ7Z4H9 259 aa19.19■□□□□ 0.66
COL27A1-207ENST00000494090 DEPDC4Q8N2C3 294 aa19.19■□□□□ 0.66
COL27A1-207ENST00000494090 SPATA6LQ8N4H0 392 aa19.19■□□□□ 0.66
COL27A1-207ENST00000494090 OR52K2Q8NGK3 314 aa19.19■□□□□ 0.66
COL27A1-207ENST00000494090 HDAC10Q969S8 669 aa19.19■□□□□ 0.66
COL27A1-207ENST00000494090 CACNB4O00305 520 aaPredicted RBP19.19■□□□□ 0.66
COL27A1-207ENST00000494090 TSPAN8P19075 237 aa19.19■□□□□ 0.66
COL27A1-207ENST00000494090 KCTD19Q17RG1 926 aaPredicted RBP19.19■□□□□ 0.66
COL27A1-207ENST00000494090 ANXA8L1Q5VT79 327 aa19.19■□□□□ 0.66
COL27A1-207ENST00000494090 MZT2AQ6P582 158 aa19.19■□□□□ 0.66
COL27A1-207ENST00000494090 GCNT7Q6ZNI0 430 aa19.19■□□□□ 0.66
COL27A1-207ENST00000494090 DSELQ8IZU8 1212 aa19.19■□□□□ 0.66
COL27A1-207ENST00000494090 BPIFB6Q8NFQ5 453 aa19.19■□□□□ 0.66
COL27A1-207ENST00000494090 SLC38A2Q96QD8 506 aa19.19■□□□□ 0.66
COL27A1-207ENST00000494090 ZNHIT2Q9UHR6 403 aa19.19■□□□□ 0.66
COL27A1-207ENST00000494090 SLC9A8Q9Y2E8 581 aa19.19■□□□□ 0.66
COL27A1-207ENST00000494090 AP4B1Q9Y6B7 739 aa19.19■□□□□ 0.66
COL27A1-207ENST00000494090 SH3BGRLO75368 114 aa19.18■□□□□ 0.66
COL27A1-207ENST00000494090 LRCH4O75427 683 aa19.18■□□□□ 0.66
COL27A1-207ENST00000494090 IL1BP01584 269 aa19.18■□□□□ 0.66
COL27A1-207ENST00000494090 FNBP1LQ5T0N5 605 aa19.18■□□□□ 0.66
COL27A1-207ENST00000494090 ZNF57Q68EA5 555 aaPredicted RBP19.18■□□□□ 0.66
COL27A1-207ENST00000494090 PROSER1Q86XN7 944 aa19.18■□□□□ 0.66
COL27A1-207ENST00000494090 ENKURQ8TC29 256 aa19.18■□□□□ 0.66
COL27A1-207ENST00000494090 CAB39LQ9H9S4 337 aa19.18■□□□□ 0.66
COL27A1-207ENST00000494090 GLOD4Q9HC38 313 aa19.18■□□□□ 0.66
COL27A1-207ENST00000494090 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.18■□□□□ 0.66
COL27A1-207ENST00000494090 IL6P05231 212 aa19.18■□□□□ 0.66
COL27A1-207ENST00000494090 FECHP22830 423 aa19.18■□□□□ 0.66
COL27A1-207ENST00000494090 HTR7P34969 479 aa19.18■□□□□ 0.66
COL27A1-207ENST00000494090 RPL38P63173 70 aaKnown RBP19.18■□□□□ 0.66
COL27A1-207ENST00000494090 DGCR6Q14129 220 aa19.18■□□□□ 0.66
COL27A1-207ENST00000494090 DUSP28Q4G0W2 176 aa19.18■□□□□ 0.66
COL27A1-207ENST00000494090 ECHDC2Q86YB7 292 aa19.18■□□□□ 0.66
COL27A1-207ENST00000494090 GSTCDQ8NEC7 633 aa19.18■□□□□ 0.66
COL27A1-207ENST00000494090 OR7A2PQ8NGA2 310 aa19.18■□□□□ 0.66
COL27A1-207ENST00000494090 MRPS33Q9Y291 106 aaKnown RBP19.18■□□□□ 0.66
COL27A1-207ENST00000494090 OR10H1Q9Y4A9 318 aa19.18■□□□□ 0.66
COL27A1-207ENST00000494090 CLDN11O75508 207 aa19.18■□□□□ 0.66
COL27A1-207ENST00000494090 GLUD1P00367 558 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms