RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 PIK3CD-AS1Q5SR53 167 aa6.31□□□□□ -1.4
SMC2-205ENST00000493955 C1QTNF12Q5T7M4 302 aa6.31□□□□□ -1.4
SMC2-205ENST00000493955 ADALQ6DHV7 355 aa6.31□□□□□ -1.4
SMC2-205ENST00000493955 PCSK4Q6UW60 755 aa6.31□□□□□ -1.4
SMC2-205ENST00000493955 ZNF66Q6ZN08 573 aa6.31□□□□□ -1.4
SMC2-205ENST00000493955 DENND5BQ6ZUT9 1274 aa6.31□□□□□ -1.4
SMC2-205ENST00000493955 LINGO2Q7L985 606 aa6.31□□□□□ -1.4
SMC2-205ENST00000493955 GGNQ86UU5 652 aa6.31□□□□□ -1.4
SMC2-205ENST00000493955 FAM217AQ8IXS0 508 aa6.31□□□□□ -1.4
SMC2-205ENST00000493955 GALNT16Q8N428 558 aa6.31□□□□□ -1.4
SMC2-205ENST00000493955 HJURPQ8NCD3 748 aaPredicted RBP6.31□□□□□ -1.4
SMC2-205ENST00000493955 RRNAD1Q96FB5 475 aaKnown RBP6.31□□□□□ -1.4
SMC2-205ENST00000493955 SLC41A2Q96JW4 573 aa6.31□□□□□ -1.4
SMC2-205ENST00000493955 OSGEPL1Q9H4B0 414 aa6.31□□□□□ -1.4
SMC2-205ENST00000493955 SLC28A3Q9HAS3 691 aa6.31□□□□□ -1.4
SMC2-205ENST00000493955 DDX4Q9NQI0 724 aaKnown RBP6.31□□□□□ -1.4
SMC2-205ENST00000493955 hCG_1809904A0A1W2PP81 198 aa6.3□□□□□ -1.4
SMC2-205ENST00000493955 A0A1W2PPE2 198 aa6.3□□□□□ -1.4
SMC2-205ENST00000493955 A0A1W2PR64 198 aa6.3□□□□□ -1.4
SMC2-205ENST00000493955 MANSC4A6NHS7 340 aaPredicted RBP6.3□□□□□ -1.4
SMC2-205ENST00000493955 MTA2O94776 668 aa6.3□□□□□ -1.4
SMC2-205ENST00000493955 HSPA4LO95757 839 aa6.3□□□□□ -1.4
SMC2-205ENST00000493955 CTSAP10619 480 aa6.3□□□□□ -1.4
SMC2-205ENST00000493955 EEF1DP29692 281 aaKnown RBP6.3□□□□□ -1.4
SMC2-205ENST00000493955 CAPZA2P47755 286 aa6.3□□□□□ -1.4
SMC2-205ENST00000493955 LIG4P49917 911 aa6.3□□□□□ -1.4
SMC2-205ENST00000493955 KRTAP10-2P60368 255 aa6.3□□□□□ -1.4
SMC2-205ENST00000493955 GAD2Q05329 585 aa6.3□□□□□ -1.4
SMC2-205ENST00000493955 NAE1Q13564 534 aa6.3□□□□□ -1.4
SMC2-205ENST00000493955 BAATQ14032 418 aaPredicted RBP6.3□□□□□ -1.4
SMC2-205ENST00000493955 TCP11X2Q5H9J9 407 aa6.3□□□□□ -1.4
SMC2-205ENST00000493955 HIST2H2BCQ6DN03 193 aa6.3□□□□□ -1.4
SMC2-205ENST00000493955 HIST2H2BDQ6DRA6 164 aa6.3□□□□□ -1.4
SMC2-205ENST00000493955 TMEM71Q6P5X7 295 aa6.3□□□□□ -1.4
SMC2-205ENST00000493955 TRILQ7L0X0 811 aa6.3□□□□□ -1.4
SMC2-205ENST00000493955 HAPLN4Q86UW8 402 aa6.3□□□□□ -1.4
SMC2-205ENST00000493955 WDR63Q8IWG1 891 aa6.3□□□□□ -1.4
SMC2-205ENST00000493955 RBFAQ8N0V3 343 aa6.3□□□□□ -1.4
SMC2-205ENST00000493955 BOLLQ8N9W6 283 aaKnown RBP6.3□□□□□ -1.4
SMC2-205ENST00000493955 FAM98AQ8NCA5 519 aaKnown RBP6.3□□□□□ -1.4
SMC2-205ENST00000493955 OR14L1PQ8NHC6 308 aa6.3□□□□□ -1.4
SMC2-205ENST00000493955 CEP76Q8TAP6 659 aa6.3□□□□□ -1.4
SMC2-205ENST00000493955 MOAP1Q96BY2 351 aa6.3□□□□□ -1.4
SMC2-205ENST00000493955 PGAP3Q96FM1 320 aaPredicted RBP6.3□□□□□ -1.4
SMC2-205ENST00000493955 HARBI1Q96MB7 349 aa6.3□□□□□ -1.4
SMC2-205ENST00000493955 TTC14Q96N46 770 aa6.3□□□□□ -1.4
SMC2-205ENST00000493955 PAFAH2Q99487 392 aa6.3□□□□□ -1.4
SMC2-205ENST00000493955 KIFC3Q9BVG8 833 aa6.3□□□□□ -1.4
SMC2-205ENST00000493955 NPFFR1Q9GZQ6 430 aa6.3□□□□□ -1.4
SMC2-205ENST00000493955 ARHGEF38Q9NXL2 777 aa6.3□□□□□ -1.4
SMC2-205ENST00000493955 CWC15Q9P013 229 aaKnown RBP6.3□□□□□ -1.4
SMC2-205ENST00000493955 PPIEQ9UNP9 301 aaKnown RBP6.3□□□□□ -1.4
SMC2-205ENST00000493955 ERVK-11Q9UQG0 969 aa6.3□□□□□ -1.4
SMC2-205ENST00000493955 R3HDM2Q9Y2K5 976 aaKnown RBP6.3□□□□□ -1.4
SMC2-205ENST00000493955 COL11A2P13942 1736 aaPredicted RBP6.3□□□□□ -1.4
SMC2-205ENST00000493955 LOC100509620A0A075B734 347 aa6.29□□□□□ -1.4
SMC2-205ENST00000493955 RGS11O94810 467 aa6.29□□□□□ -1.4
SMC2-205ENST00000493955 LATS1O95835 1130 aa6.29□□□□□ -1.4
SMC2-205ENST00000493955 PRKCGP05129 697 aa6.29□□□□□ -1.4
SMC2-205ENST00000493955 ATP5F1P24539 256 aaPredicted RBP6.29□□□□□ -1.4
SMC2-205ENST00000493955 CHATP28329 748 aa6.29□□□□□ -1.4
SMC2-205ENST00000493955 INHBCP55103 352 aa6.29□□□□□ -1.4
SMC2-205ENST00000493955 TAS2R40P59535 323 aa6.29□□□□□ -1.4
SMC2-205ENST00000493955 ID2Q02363 134 aa6.29□□□□□ -1.4
SMC2-205ENST00000493955 C9orf152Q5JTZ5 239 aa6.29□□□□□ -1.4
SMC2-205ENST00000493955 ASPHD1Q5U4P2 390 aa6.29□□□□□ -1.4
SMC2-205ENST00000493955 HEPHL1Q6MZM0 1159 aa6.29□□□□□ -1.4
SMC2-205ENST00000493955 ZNF788Q6ZQV5 615 aa6.29□□□□□ -1.4
SMC2-205ENST00000493955 PTF1AQ7RTS3 328 aa6.29□□□□□ -1.4
SMC2-205ENST00000493955 CAMK1DQ8IU85 385 aa6.29□□□□□ -1.4
SMC2-205ENST00000493955 SFTPA2Q8IWL1 248 aa6.29□□□□□ -1.4
SMC2-205ENST00000493955 MINDY1Q8N5J2 469 aa6.29□□□□□ -1.4
SMC2-205ENST00000493955 SLC44A5Q8NCS7 719 aa6.29□□□□□ -1.4
SMC2-205ENST00000493955 DUSP19Q8WTR2 217 aa6.29□□□□□ -1.4
SMC2-205ENST00000493955 TMEM18Q96B42 140 aa6.29□□□□□ -1.4
SMC2-205ENST00000493955 VCPIP1Q96JH7 1222 aa6.29□□□□□ -1.4
SMC2-205ENST00000493955 KLHL31Q9H511 634 aa6.29□□□□□ -1.4
SMC2-205ENST00000493955 ERVMER34-1Q9H9K5 563 aa6.29□□□□□ -1.4
SMC2-205ENST00000493955 EXO1Q9UQ84 846 aaKnown RBP6.29□□□□□ -1.4
SMC2-205ENST00000493955 TRPV2Q9Y5S1 764 aa6.29□□□□□ -1.4
SMC2-205ENST00000493955 A0A0G2JK05 382 aa6.28□□□□□ -1.4
SMC2-205ENST00000493955 LRRC72A6NJI9 287 aa6.28□□□□□ -1.4
SMC2-205ENST00000493955 AKR1B15C9JRZ8 316 aaPredicted RBP6.28□□□□□ -1.4
SMC2-205ENST00000493955 TBX10O75333 385 aa6.28□□□□□ -1.4
SMC2-205ENST00000493955 DAB1O75553 588 aa6.28□□□□□ -1.4
SMC2-205ENST00000493955 JRKO75564 520 aa6.28□□□□□ -1.4
SMC2-205ENST00000493955 AFPP02771 609 aaKnown RBP6.28□□□□□ -1.4
SMC2-205ENST00000493955 ABCB1P08183 1280 aaPredicted RBP6.28□□□□□ -1.4
SMC2-205ENST00000493955 ANXA7P20073 488 aaKnown RBP6.28□□□□□ -1.4
SMC2-205ENST00000493955 AVPR1AP37288 418 aa6.28□□□□□ -1.4
SMC2-205ENST00000493955 RAD23AP54725 363 aa6.28□□□□□ -1.4
SMC2-205ENST00000493955 ELLP55199 621 aaPredicted RBP6.28□□□□□ -1.4
SMC2-205ENST00000493955 CDH12P55289 794 aa6.28□□□□□ -1.4
SMC2-205ENST00000493955 CEP78Q5JTW2 689 aa6.28□□□□□ -1.4
SMC2-205ENST00000493955 LRIF1Q5T3J3 769 aa6.28□□□□□ -1.4
SMC2-205ENST00000493955 KRT79Q5XKE5 535 aa6.28□□□□□ -1.4
SMC2-205ENST00000493955 BICD2Q8TD16 824 aa6.28□□□□□ -1.4
SMC2-205ENST00000493955 NSMCE1Q8WV22 266 aa6.28□□□□□ -1.4
SMC2-205ENST00000493955 IGSF8Q969P0 613 aa6.28□□□□□ -1.4
SMC2-205ENST00000493955 LRRC59Q96AG4 307 aaKnown RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms