RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 TSGA13Q96PP4 275 aa12.65□□□□□ -0.38
HSPG2-212ENST00000493940 LGMNQ99538 433 aa12.65□□□□□ -0.38
HSPG2-212ENST00000493940 SEMA3CQ99985 751 aa12.65□□□□□ -0.38
HSPG2-212ENST00000493940 ZNF670Q9BS34 389 aa12.65□□□□□ -0.38
HSPG2-212ENST00000493940 DEF6Q9H4E7 631 aa12.65□□□□□ -0.38
HSPG2-212ENST00000493940 CCDC86Q9H6F5 360 aaKnown RBP12.65□□□□□ -0.38
HSPG2-212ENST00000493940 APOBEC3BQ9UH17 382 aaKnown RBP12.65□□□□□ -0.38
HSPG2-212ENST00000493940 SALL4Q9UJQ4 1053 aa12.65□□□□□ -0.38
HSPG2-212ENST00000493940 RAXQ9Y2V3 346 aa12.65□□□□□ -0.38
HSPG2-212ENST00000493940 PPIL1Q9Y3C6 166 aa12.65□□□□□ -0.38
HSPG2-212ENST00000493940 PCDHB1Q9Y5F3 818 aa12.65□□□□□ -0.38
HSPG2-212ENST00000493940 CSNK1G3Q9Y6M4 447 aa12.65□□□□□ -0.38
HSPG2-212ENST00000493940 SMG1Q96Q15 3661 aaKnown RBP12.65□□□□□ -0.38
HSPG2-212ENST00000493940 IGSF10Q6WRI0 2623 aa12.64□□□□□ -0.39
HSPG2-212ENST00000493940 MGAQ8IWI9 3026 aa12.64□□□□□ -0.39
HSPG2-212ENST00000493940 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.64□□□□□ -0.39
HSPG2-212ENST00000493940 CFAP69A5D8W1 941 aa12.64□□□□□ -0.39
HSPG2-212ENST00000493940 RCCD1A6NED2 376 aa12.64□□□□□ -0.39
HSPG2-212ENST00000493940 AKR1B15C9JRZ8 316 aaPredicted RBP12.64□□□□□ -0.39
HSPG2-212ENST00000493940 MATN3O15232 486 aa12.64□□□□□ -0.39
HSPG2-212ENST00000493940 OPA1O60313 960 aa12.64□□□□□ -0.39
HSPG2-212ENST00000493940 PGLSO95336 258 aa12.64□□□□□ -0.39
HSPG2-212ENST00000493940 HLA-DQB2P05538 268 aa12.64□□□□□ -0.39
HSPG2-212ENST00000493940 TGM2P21980 687 aa12.64□□□□□ -0.39
HSPG2-212ENST00000493940 CCNCP24863 283 aa12.64□□□□□ -0.39
HSPG2-212ENST00000493940 MAN1A1P33908 653 aa12.64□□□□□ -0.39
HSPG2-212ENST00000493940 TRIM23P36406 574 aa12.64□□□□□ -0.39
HSPG2-212ENST00000493940 PEX5P50542 639 aa12.64□□□□□ -0.39
HSPG2-212ENST00000493940 HK3P52790 923 aa12.64□□□□□ -0.39
HSPG2-212ENST00000493940 DAB2P98082 770 aa12.64□□□□□ -0.39
HSPG2-212ENST00000493940 PPARDQ03181 441 aa12.64□□□□□ -0.39
HSPG2-212ENST00000493940 ADCY2Q08462 1091 aa12.64□□□□□ -0.39
HSPG2-212ENST00000493940 NFATC4Q14934 902 aa12.64□□□□□ -0.39
HSPG2-212ENST00000493940 PDK2Q15119 407 aa12.64□□□□□ -0.39
HSPG2-212ENST00000493940 LLGL1Q15334 1064 aa12.64□□□□□ -0.39
HSPG2-212ENST00000493940 SOWAHCQ53LP3 525 aaPredicted RBP12.64□□□□□ -0.39
HSPG2-212ENST00000493940 CFAP58Q5T655 872 aa12.64□□□□□ -0.39
HSPG2-212ENST00000493940 DENND2CQ68D51 928 aa12.64□□□□□ -0.39
HSPG2-212ENST00000493940 C19orf48Q6RUI8 117 aa12.64□□□□□ -0.39
HSPG2-212ENST00000493940 RD3Q7Z3Z2 195 aa12.64□□□□□ -0.39
HSPG2-212ENST00000493940 HID1Q8IV36 788 aa12.64□□□□□ -0.39
HSPG2-212ENST00000493940 DCBLD1Q8N8Z6 715 aa12.64□□□□□ -0.39
HSPG2-212ENST00000493940 CCL4L1Q8NHW4 92 aa12.64□□□□□ -0.39
HSPG2-212ENST00000493940 RNF25Q96BH1 459 aaPredicted RBP12.64□□□□□ -0.39
HSPG2-212ENST00000493940 BOCQ9BWV1 1114 aa12.64□□□□□ -0.39
HSPG2-212ENST00000493940 FGF22Q9HCT0 170 aa12.64□□□□□ -0.39
HSPG2-212ENST00000493940 RBM22Q9NW64 420 aaKnown RBP eCLIP12.64□□□□□ -0.39
HSPG2-212ENST00000493940 RABGEF1Q9UJ41 708 aa12.64□□□□□ -0.39
HSPG2-212ENST00000493940 RAI2Q9Y5P3 530 aa12.64□□□□□ -0.39
HSPG2-212ENST00000493940 ST14Q9Y5Y6 855 aa12.64□□□□□ -0.39
HSPG2-212ENST00000493940 CPED1A4D0V7 1026 aa12.63□□□□□ -0.39
HSPG2-212ENST00000493940 NEMP2A6NFY4 417 aa12.63□□□□□ -0.39
HSPG2-212ENST00000493940 LMO7DNF2Z398 122 aa12.63□□□□□ -0.39
HSPG2-212ENST00000493940 KCNK1O00180 336 aa12.63□□□□□ -0.39
HSPG2-212ENST00000493940 TLX3O43711 291 aaPredicted RBP12.63□□□□□ -0.39
HSPG2-212ENST00000493940 SOCS5O75159 536 aa12.63□□□□□ -0.39
HSPG2-212ENST00000493940 HEXIM1O94992 359 aaKnown RBP12.63□□□□□ -0.39
HSPG2-212ENST00000493940 MT-CO3P00414 261 aa12.63□□□□□ -0.39
HSPG2-212ENST00000493940 SOD1P00441 154 aa12.63□□□□□ -0.39
HSPG2-212ENST00000493940 CPP00450 1065 aa12.63□□□□□ -0.39
HSPG2-212ENST00000493940 ELFN1P0C7U0 828 aa12.63□□□□□ -0.39
HSPG2-212ENST00000493940 TNNT1P13805 278 aa12.63□□□□□ -0.39
HSPG2-212ENST00000493940 CCNB1P14635 433 aa12.63□□□□□ -0.39
HSPG2-212ENST00000493940 VIPR1P32241 457 aa12.63□□□□□ -0.39
HSPG2-212ENST00000493940 SERPINB6P35237 376 aa12.63□□□□□ -0.39
HSPG2-212ENST00000493940 HNF1BP35680 557 aa12.63□□□□□ -0.39
HSPG2-212ENST00000493940 ETV3P41162 512 aa12.63□□□□□ -0.39
HSPG2-212ENST00000493940 SRP54P61011 504 aaKnown RBP12.63□□□□□ -0.39
HSPG2-212ENST00000493940 POLR2LP62875 67 aaKnown RBP12.63□□□□□ -0.39
HSPG2-212ENST00000493940 ITKQ08881 620 aa12.63□□□□□ -0.39
HSPG2-212ENST00000493940 ZBTB17Q13105 803 aa12.63□□□□□ -0.39
HSPG2-212ENST00000493940 ILKQ13418 452 aa12.63□□□□□ -0.39
HSPG2-212ENST00000493940 MTM1Q13496 603 aa12.63□□□□□ -0.39
HSPG2-212ENST00000493940 PTK2BQ14289 1009 aa12.63□□□□□ -0.39
HSPG2-212ENST00000493940 ACOX1Q15067 660 aa12.63□□□□□ -0.39
HSPG2-212ENST00000493940 TCEAL1Q15170 157 aa12.63□□□□□ -0.39
HSPG2-212ENST00000493940 IFI16Q16666 785 aaKnown RBP12.63□□□□□ -0.39
HSPG2-212ENST00000493940 SLC9A4Q6AI14 798 aa12.63□□□□□ -0.39
HSPG2-212ENST00000493940 ALG1LQ6GMV1 187 aa12.63□□□□□ -0.39
HSPG2-212ENST00000493940 PNCKQ6P2M8 343 aa12.63□□□□□ -0.39
HSPG2-212ENST00000493940 Q6ZVL8 140 aa12.63□□□□□ -0.39
HSPG2-212ENST00000493940 TECPR1Q7Z6L1 1165 aa12.63□□□□□ -0.39
HSPG2-212ENST00000493940 PDZD3Q86UT5 571 aa12.63□□□□□ -0.39
HSPG2-212ENST00000493940 PDCD7Q8N8D1 485 aaKnown RBP12.63□□□□□ -0.39
HSPG2-212ENST00000493940 IFI44Q8TCB0 444 aa12.63□□□□□ -0.39
HSPG2-212ENST00000493940 SCRN2Q96FV2 425 aa12.63□□□□□ -0.39
HSPG2-212ENST00000493940 CRELD1Q96HD1 420 aa12.63□□□□□ -0.39
HSPG2-212ENST00000493940 MCCC1Q96RQ3 725 aaPredicted RBP12.63□□□□□ -0.39
HSPG2-212ENST00000493940 WDR24Q96S15 920 aa12.63□□□□□ -0.39
HSPG2-212ENST00000493940 CEP41Q9BYV8 373 aa12.63□□□□□ -0.39
HSPG2-212ENST00000493940 TRIM5Q9C035 493 aa12.63□□□□□ -0.39
HSPG2-212ENST00000493940 ZNHIT6Q9NWK9 470 aaKnown RBP12.63□□□□□ -0.39
HSPG2-212ENST00000493940 SAE1Q9UBE0 346 aaPredicted RBP12.63□□□□□ -0.39
HSPG2-212ENST00000493940 SPASTQ9UBP0 616 aa12.63□□□□□ -0.39
HSPG2-212ENST00000493940 PHTF1Q9UMS5 762 aa12.63□□□□□ -0.39
HSPG2-212ENST00000493940 CHKBQ9Y259 395 aa12.63□□□□□ -0.39
HSPG2-212ENST00000493940 LRRD1A4D1F6 860 aa12.62□□□□□ -0.39
HSPG2-212ENST00000493940 PMS2P1A4D2B8 440 aa12.62□□□□□ -0.39
HSPG2-212ENST00000493940 EME2A4GXA9 379 aaPredicted RBP12.62□□□□□ -0.39
HSPG2-212ENST00000493940 H3BM21 787 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms