RNA–Protein interactions for RNA: ENST00000493864.1

TRA2B-216, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-216ENST00000493864 WHAMMP3Q1A5X7 153 aa6.72□□□□□ -1.33
TRA2B-216ENST00000493864 FAM133BQ5BKY9 247 aaKnown RBP6.72□□□□□ -1.33
TRA2B-216ENST00000493864 ANKRD20A8PQ5CZ79 823 aa6.72□□□□□ -1.33
TRA2B-216ENST00000493864 TFDP3Q5H9I0 405 aa6.72□□□□□ -1.33
TRA2B-216ENST00000493864 MS4A13Q5J8X5 152 aa6.72□□□□□ -1.33
TRA2B-216ENST00000493864 FAM78AQ5JUQ0 283 aa6.72□□□□□ -1.33
TRA2B-216ENST00000493864 SEL1L2Q5TEA6 688 aa6.72□□□□□ -1.33
TRA2B-216ENST00000493864 RAP1GAP2Q684P5 730 aa6.72□□□□□ -1.33
TRA2B-216ENST00000493864 NUGGCQ68CJ6 796 aa6.72□□□□□ -1.33
TRA2B-216ENST00000493864 CES5AQ6NT32 575 aa6.72□□□□□ -1.33
TRA2B-216ENST00000493864 RFWD3Q6PCD5 774 aa6.72□□□□□ -1.33
TRA2B-216ENST00000493864 HTR3DQ70Z44 454 aa6.72□□□□□ -1.33
TRA2B-216ENST00000493864 SLC13A5Q86YT5 568 aaPredicted RBP6.72□□□□□ -1.33
TRA2B-216ENST00000493864 RFX6Q8HWS3 928 aa6.72□□□□□ -1.33
TRA2B-216ENST00000493864 ZNF683Q8IZ20 524 aa6.72□□□□□ -1.33
TRA2B-216ENST00000493864 PQLC3Q8N755 202 aa6.72□□□□□ -1.33
TRA2B-216ENST00000493864 OR2W6PQ8NHA6 318 aa6.72□□□□□ -1.33
TRA2B-216ENST00000493864 ZSCAN18Q8TBC5 510 aaPredicted RBP6.72□□□□□ -1.33
TRA2B-216ENST00000493864 ACTRT1Q8TDG2 376 aa6.72□□□□□ -1.33
TRA2B-216ENST00000493864 FGF13Q92913 245 aa6.72□□□□□ -1.33
TRA2B-216ENST00000493864 AZIN2Q96A70 460 aa6.72□□□□□ -1.33
TRA2B-216ENST00000493864 RSPRY1Q96DX4 576 aa6.72□□□□□ -1.33
TRA2B-216ENST00000493864 C1orf74Q96LT6 269 aa6.72□□□□□ -1.33
TRA2B-216ENST00000493864 RIPOR3Q96MK2 946 aa6.72□□□□□ -1.33
TRA2B-216ENST00000493864 LRRC3BQ96PB8 259 aa6.72□□□□□ -1.33
TRA2B-216ENST00000493864 CSPG4P5Q96PW8 444 aa6.72□□□□□ -1.33
TRA2B-216ENST00000493864 MYADMQ96S97 322 aa6.72□□□□□ -1.33
TRA2B-216ENST00000493864 PRMT1Q99873 361 aaKnown RBP6.72□□□□□ -1.33
TRA2B-216ENST00000493864 TUBB2BQ9BVA1 445 aa6.72□□□□□ -1.33
TRA2B-216ENST00000493864 CARD6Q9BX69 1037 aa6.72□□□□□ -1.33
TRA2B-216ENST00000493864 AP1M1Q9BXS5 423 aa6.72□□□□□ -1.33
TRA2B-216ENST00000493864 MAK16Q9BXY0 300 aaKnown RBP6.72□□□□□ -1.33
TRA2B-216ENST00000493864 DCLK3Q9C098 648 aa6.72□□□□□ -1.33
TRA2B-216ENST00000493864 LINC00597Q9H2U6 94 aa6.72□□□□□ -1.33
TRA2B-216ENST00000493864 TDP1Q9NUW8 608 aa6.72□□□□□ -1.33
TRA2B-216ENST00000493864 CD207Q9UJ71 328 aa6.72□□□□□ -1.33
TRA2B-216ENST00000493864 TTC7AQ9ULT0 858 aaPredicted RBP6.72□□□□□ -1.33
TRA2B-216ENST00000493864 ARHGAP26Q9UNA1 814 aa6.72□□□□□ -1.33
TRA2B-216ENST00000493864 SMG5Q9UPR3 1016 aaKnown RBP6.72□□□□□ -1.33
TRA2B-216ENST00000493864 R3HDM2Q9Y2K5 976 aaKnown RBP6.72□□□□□ -1.33
TRA2B-216ENST00000493864 MFHAS1Q9Y4C4 1052 aa6.72□□□□□ -1.33
TRA2B-216ENST00000493864 MRFAP1Q9Y605 127 aa6.72□□□□□ -1.33
TRA2B-216ENST00000493864 NUP205Q92621 2012 aa6.72□□□□□ -1.33
TRA2B-216ENST00000493864 CLUHO75153 1309 aa6.72□□□□□ -1.33
TRA2B-216ENST00000493864 DRGXA6NNA5 263 aa6.71□□□□□ -1.34
TRA2B-216ENST00000493864 E9PAM4 449 aa6.71□□□□□ -1.34
TRA2B-216ENST00000493864 PGRMC1O00264 195 aaKnown RBP6.71□□□□□ -1.34
TRA2B-216ENST00000493864 EEF2KO00418 725 aaKnown RBP6.71□□□□□ -1.34
TRA2B-216ENST00000493864 DAPK3O43293 454 aa6.71□□□□□ -1.34
TRA2B-216ENST00000493864 CST8O60676 142 aa6.71□□□□□ -1.34
TRA2B-216ENST00000493864 CNTN5O94779 1100 aa6.71□□□□□ -1.34
TRA2B-216ENST00000493864 ERCC2P18074 760 aa6.71□□□□□ -1.34
TRA2B-216ENST00000493864 PI3P19957 117 aa6.71□□□□□ -1.34
TRA2B-216ENST00000493864 KCNA5P22460 613 aa6.71□□□□□ -1.34
TRA2B-216ENST00000493864 SLC6A4P31645 630 aa6.71□□□□□ -1.34
TRA2B-216ENST00000493864 MTHFRP42898 656 aa6.71□□□□□ -1.34
TRA2B-216ENST00000493864 PAFAH1B1P43034 410 aa6.71□□□□□ -1.34
TRA2B-216ENST00000493864 SLC11A2P49281 568 aa6.71□□□□□ -1.34
TRA2B-216ENST00000493864 SLC10A2Q12908 348 aaPredicted RBP6.71□□□□□ -1.34
TRA2B-216ENST00000493864 KLF1Q13351 362 aaPredicted RBP6.71□□□□□ -1.34
TRA2B-216ENST00000493864 DPYSQ14117 519 aa6.71□□□□□ -1.34
TRA2B-216ENST00000493864 SSPNQ14714 243 aa6.71□□□□□ -1.34
TRA2B-216ENST00000493864 SIX1Q15475 284 aaPredicted RBP6.71□□□□□ -1.34
TRA2B-216ENST00000493864 CCDC181Q5TID7 509 aa6.71□□□□□ -1.34
TRA2B-216ENST00000493864 MANEALQ5VSG8 457 aa6.71□□□□□ -1.34
TRA2B-216ENST00000493864 RWDD4Q6NW29 188 aaKnown RBP6.71□□□□□ -1.34
TRA2B-216ENST00000493864 FBXL22Q6P050 247 aa6.71□□□□□ -1.34
TRA2B-216ENST00000493864 C1orf228Q6PIY5 440 aa6.71□□□□□ -1.34
TRA2B-216ENST00000493864 NPNTQ6UXI9 565 aa6.71□□□□□ -1.34
TRA2B-216ENST00000493864 RFX8Q6ZV50 586 aa6.71□□□□□ -1.34
TRA2B-216ENST00000493864 BBS12Q6ZW61 710 aa6.71□□□□□ -1.34
TRA2B-216ENST00000493864 GET4Q7L5D6 327 aaPredicted RBP6.71□□□□□ -1.34
TRA2B-216ENST00000493864 STK32CQ86UX6 486 aa6.71□□□□□ -1.34
TRA2B-216ENST00000493864 CHSY1Q86X52 802 aa6.71□□□□□ -1.34
TRA2B-216ENST00000493864 CIR1Q86X95 450 aaPredicted RBP6.71□□□□□ -1.34
TRA2B-216ENST00000493864 BBS7Q8IWZ6 715 aa6.71□□□□□ -1.34
TRA2B-216ENST00000493864 TMEFF1Q8IYR6 380 aa6.71□□□□□ -1.34
TRA2B-216ENST00000493864 LGI2Q8N0V4 545 aa6.71□□□□□ -1.34
TRA2B-216ENST00000493864 CFAP52Q8N1V2 620 aa6.71□□□□□ -1.34
TRA2B-216ENST00000493864 PLD5Q8N7P1 536 aa6.71□□□□□ -1.34
TRA2B-216ENST00000493864 PRELID2Q8N945 189 aa6.71□□□□□ -1.34
TRA2B-216ENST00000493864 C1orf54Q8WWF1 131 aa6.71□□□□□ -1.34
TRA2B-216ENST00000493864 IGSF8Q969P0 613 aa6.71□□□□□ -1.34
TRA2B-216ENST00000493864 FAF2Q96CS3 445 aa6.71□□□□□ -1.34
TRA2B-216ENST00000493864 TBC1D31Q96DN5 1066 aa6.71□□□□□ -1.34
TRA2B-216ENST00000493864 P2RY11Q96G91 374 aa6.71□□□□□ -1.34
TRA2B-216ENST00000493864 FAM118BQ9BPY3 351 aa6.71□□□□□ -1.34
TRA2B-216ENST00000493864 ZNF670Q9BS34 389 aa6.71□□□□□ -1.34
TRA2B-216ENST00000493864 POMKQ9H5K3 350 aa6.71□□□□□ -1.34
TRA2B-216ENST00000493864 UBE2ZQ9H832 354 aaPredicted RBP6.71□□□□□ -1.34
TRA2B-216ENST00000493864 L2HGDHQ9H9P8 463 aa6.71□□□□□ -1.34
TRA2B-216ENST00000493864 THG1LQ9NWX6 298 aaKnown RBP6.71□□□□□ -1.34
TRA2B-216ENST00000493864 GDE1Q9NZC3 331 aa6.71□□□□□ -1.34
TRA2B-216ENST00000493864 MPP6Q9NZW5 540 aa6.71□□□□□ -1.34
TRA2B-216ENST00000493864 SAE1Q9UBE0 346 aaPredicted RBP6.71□□□□□ -1.34
TRA2B-216ENST00000493864 RNF14Q9UBS8 474 aa6.71□□□□□ -1.34
TRA2B-216ENST00000493864 CDH7Q9ULB5 785 aa6.71□□□□□ -1.34
TRA2B-216ENST00000493864 VANGL2Q9ULK5 521 aa6.71□□□□□ -1.34
TRA2B-216ENST00000493864 CNOT6Q9ULM6 557 aaKnown RBP6.71□□□□□ -1.34
TRA2B-216ENST00000493864 SH3BP1Q9Y3L3 701 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms