RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 IFI16Q16666 785 aaKnown RBP6.83□□□□□ -1.32
VPS52-219ENST00000493379 SMTNL2Q2TAL5 461 aa6.83□□□□□ -1.32
VPS52-219ENST00000493379 PLK5Q496M5 336 aa6.83□□□□□ -1.32
VPS52-219ENST00000493379 FNDC3BQ53EP0 1204 aaKnown RBP6.83□□□□□ -1.32
VPS52-219ENST00000493379 USP39Q53GS9 565 aaKnown RBP6.83□□□□□ -1.32
VPS52-219ENST00000493379 PPP6R3Q5H9R7 873 aaPredicted RBP6.83□□□□□ -1.32
VPS52-219ENST00000493379 NCBP2-AS2Q69YL0 99 aa6.83□□□□□ -1.32
VPS52-219ENST00000493379 TMCO3Q6UWJ1 677 aa6.83□□□□□ -1.32
VPS52-219ENST00000493379 MARCH9Q86YJ5 346 aa6.83□□□□□ -1.32
VPS52-219ENST00000493379 PLD5Q8N7P1 536 aa6.83□□□□□ -1.32
VPS52-219ENST00000493379 KCTD6Q8NC69 237 aa6.83□□□□□ -1.32
VPS52-219ENST00000493379 LSM14AQ8ND56 463 aaKnown RBP6.83□□□□□ -1.32
VPS52-219ENST00000493379 CADM4Q8NFZ8 388 aa6.83□□□□□ -1.32
VPS52-219ENST00000493379 EXD1Q8NHP7 514 aa6.83□□□□□ -1.32
VPS52-219ENST00000493379 MAML1Q92585 1016 aa6.83□□□□□ -1.32
VPS52-219ENST00000493379 HSPH1Q92598 858 aa6.83□□□□□ -1.32
VPS52-219ENST00000493379 GAL3ST3Q96A11 431 aa6.83□□□□□ -1.32
VPS52-219ENST00000493379 SIPA1Q96FS4 1042 aa6.83□□□□□ -1.32
VPS52-219ENST00000493379 HMCESQ96FZ2 354 aa6.83□□□□□ -1.32
VPS52-219ENST00000493379 ZNF419Q96HQ0 510 aaPredicted RBP6.83□□□□□ -1.32
VPS52-219ENST00000493379 PSKH2Q96QS6 385 aa6.83□□□□□ -1.32
VPS52-219ENST00000493379 BRD8Q9H0E9 1235 aa6.83□□□□□ -1.32
VPS52-219ENST00000493379 DUSP15Q9H1R2 295 aaPredicted RBP6.83□□□□□ -1.32
VPS52-219ENST00000493379 SOX17Q9H6I2 414 aaPredicted RBP6.83□□□□□ -1.32
VPS52-219ENST00000493379 KCND1Q9NSA2 647 aa6.83□□□□□ -1.32
VPS52-219ENST00000493379 AMACRQ9UHK6 382 aa6.83□□□□□ -1.32
VPS52-219ENST00000493379 SLC25A13Q9UJS0 675 aa6.83□□□□□ -1.32
VPS52-219ENST00000493379 HPCAL4Q9UM19 191 aa6.83□□□□□ -1.32
VPS52-219ENST00000493379 NUP205Q92621 2012 aa6.83□□□□□ -1.32
VPS52-219ENST00000493379 GOLGA4Q13439 2230 aaKnown RBP6.82□□□□□ -1.32
VPS52-219ENST00000493379 PTPRBP23467 1997 aa6.82□□□□□ -1.32
VPS52-219ENST00000493379 A0A087WV48 116 aa6.82□□□□□ -1.32
VPS52-219ENST00000493379 IGHV1OR15-9A0A0B4J2B8 117 aa6.82□□□□□ -1.32
VPS52-219ENST00000493379 MIF4GDA9UHW6 222 aaKnown RBP6.82□□□□□ -1.32
VPS52-219ENST00000493379 B8ZZF3 427 aa6.82□□□□□ -1.32
VPS52-219ENST00000493379 J3KR12 359 aa6.82□□□□□ -1.32
VPS52-219ENST00000493379 K7ERQ8 282 aa6.82□□□□□ -1.32
VPS52-219ENST00000493379 CBX4O00257 560 aa6.82□□□□□ -1.32
VPS52-219ENST00000493379 MATN3O15232 486 aa6.82□□□□□ -1.32
VPS52-219ENST00000493379 DDX3YO15523 660 aaKnown RBP6.82□□□□□ -1.32
VPS52-219ENST00000493379 SLC7A4O43246 635 aa6.82□□□□□ -1.32
VPS52-219ENST00000493379 DAPK3O43293 454 aa6.82□□□□□ -1.32
VPS52-219ENST00000493379 POP4O95707 220 aaKnown RBP6.82□□□□□ -1.32
VPS52-219ENST00000493379 CTSLP07711 333 aa6.82□□□□□ -1.32
VPS52-219ENST00000493379 CCDC175P0C221 793 aa6.82□□□□□ -1.32
VPS52-219ENST00000493379 HLA-EP13747 358 aa6.82□□□□□ -1.32
VPS52-219ENST00000493379 VAV1P15498 845 aa6.82□□□□□ -1.32
VPS52-219ENST00000493379 CR2P20023 1033 aa6.82□□□□□ -1.32
VPS52-219ENST00000493379 C5AR1P21730 350 aa6.82□□□□□ -1.32
VPS52-219ENST00000493379 OXTRP30559 389 aa6.82□□□□□ -1.32
VPS52-219ENST00000493379 SERPINB6P35237 376 aa6.82□□□□□ -1.32
VPS52-219ENST00000493379 DRD3P35462 400 aa6.82□□□□□ -1.32
VPS52-219ENST00000493379 GARSP41250 739 aaKnown RBP6.82□□□□□ -1.32
VPS52-219ENST00000493379 WASP42768 502 aa6.82□□□□□ -1.32
VPS52-219ENST00000493379 TPMTP51580 245 aa6.82□□□□□ -1.32
VPS52-219ENST00000493379 SRSF11Q05519 484 aaKnown RBP6.82□□□□□ -1.32
VPS52-219ENST00000493379 LY6DQ14210 128 aa6.82□□□□□ -1.32
VPS52-219ENST00000493379 MYLK3Q32MK0 819 aa6.82□□□□□ -1.32
VPS52-219ENST00000493379 CARD16Q5EG05 197 aa6.82□□□□□ -1.32
VPS52-219ENST00000493379 TFDP3Q5H9I0 405 aa6.82□□□□□ -1.32
VPS52-219ENST00000493379 RALGPS1Q5JS13 557 aa6.82□□□□□ -1.32
VPS52-219ENST00000493379 PMS2CLQ68D20 193 aa6.82□□□□□ -1.32
VPS52-219ENST00000493379 ZNF776Q68DI1 518 aaPredicted RBP6.82□□□□□ -1.32
VPS52-219ENST00000493379 C22orf39Q6P5X5 142 aa6.82□□□□□ -1.32
VPS52-219ENST00000493379 MFSD7Q6UXD7 560 aa6.82□□□□□ -1.32
VPS52-219ENST00000493379 SLC36A4Q6YBV0 504 aa6.82□□□□□ -1.32
VPS52-219ENST00000493379 DPY19L3Q6ZPD9 716 aa6.82□□□□□ -1.32
VPS52-219ENST00000493379 DAAM2Q86T65 1068 aa6.82□□□□□ -1.32
VPS52-219ENST00000493379 REXO1L1PQ8IX06 675 aa6.82□□□□□ -1.32
VPS52-219ENST00000493379 TP53INP2Q8IXH6 220 aa6.82□□□□□ -1.32
VPS52-219ENST00000493379 SYCE1Q8N0S2 351 aa6.82□□□□□ -1.32
VPS52-219ENST00000493379 IL22RA1Q8N6P7 574 aa6.82□□□□□ -1.32
VPS52-219ENST00000493379 OR2AP1Q8NGE2 309 aa6.82□□□□□ -1.32
VPS52-219ENST00000493379 DNASE2BQ8WZ79 361 aa6.82□□□□□ -1.32
VPS52-219ENST00000493379 ALG3Q92685 438 aa6.82□□□□□ -1.32
VPS52-219ENST00000493379 PRCCQ92733 491 aaPredicted RBP6.82□□□□□ -1.32
VPS52-219ENST00000493379 KRT35Q92764 455 aa6.82□□□□□ -1.32
VPS52-219ENST00000493379 HDAC11Q96DB2 347 aa6.82□□□□□ -1.32
VPS52-219ENST00000493379 FCRL3Q96P31 734 aaPredicted RBP6.82□□□□□ -1.32
VPS52-219ENST00000493379 OLFM3Q96PB7 478 aa6.82□□□□□ -1.32
VPS52-219ENST00000493379 DESI2Q9BSY9 194 aa6.82□□□□□ -1.32
VPS52-219ENST00000493379 HDAC8Q9BY41 377 aa6.82□□□□□ -1.32
VPS52-219ENST00000493379 KCNF1Q9H3M0 494 aa6.82□□□□□ -1.32
VPS52-219ENST00000493379 MTG2Q9H4K7 406 aa6.82□□□□□ -1.32
VPS52-219ENST00000493379 PIF1Q9H611 641 aa6.82□□□□□ -1.32
VPS52-219ENST00000493379 ZDHHC4Q9NPG8 344 aa6.82□□□□□ -1.32
VPS52-219ENST00000493379 VPS45Q9NRW7 570 aa6.82□□□□□ -1.32
VPS52-219ENST00000493379 DTLQ9NZJ0 730 aa6.82□□□□□ -1.32
VPS52-219ENST00000493379 DKK3Q9UBP4 350 aa6.82□□□□□ -1.32
VPS52-219ENST00000493379 IL17BQ9UHF5 180 aa6.82□□□□□ -1.32
VPS52-219ENST00000493379 IPO11Q9UI26 975 aaKnown RBP6.82□□□□□ -1.32
VPS52-219ENST00000493379 MBD1Q9UIS9 605 aaPredicted RBP6.82□□□□□ -1.32
VPS52-219ENST00000493379 FZD4Q9ULV1 537 aa6.82□□□□□ -1.32
VPS52-219ENST00000493379 TPX2Q9ULW0 747 aaKnown RBP6.82□□□□□ -1.32
VPS52-219ENST00000493379 PPT2Q9UMR5 302 aa6.82□□□□□ -1.32
VPS52-219ENST00000493379 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.82□□□□□ -1.32
VPS52-219ENST00000493379 hCG_1818297A0A087WSY0 165 aa6.81□□□□□ -1.32
VPS52-219ENST00000493379 TSPAN11A1L157 253 aa6.81□□□□□ -1.32
VPS52-219ENST00000493379 BUB1O43683 1085 aa6.81□□□□□ -1.32
VPS52-219ENST00000493379 SPOPO43791 374 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms