RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 PMPCBO75439 489 aa12.82□□□□□ -0.36
CLIP2-209ENST00000493166 HEXIM1O94992 359 aaKnown RBP12.82□□□□□ -0.36
CLIP2-209ENST00000493166 PRLP01236 227 aa12.82□□□□□ -0.36
CLIP2-209ENST00000493166 TRBC1P01850 177 aa12.82□□□□□ -0.36
CLIP2-209ENST00000493166 MSNP26038 577 aaKnown RBP12.82□□□□□ -0.36
CLIP2-209ENST00000493166 CD68P34810 354 aaPredicted RBP12.82□□□□□ -0.36
CLIP2-209ENST00000493166 HNF1BP35680 557 aa12.82□□□□□ -0.36
CLIP2-209ENST00000493166 IGFALSP35858 605 aa12.82□□□□□ -0.36
CLIP2-209ENST00000493166 TNNT3P45378 269 aaPredicted RBP12.82□□□□□ -0.36
CLIP2-209ENST00000493166 RABIFP47224 123 aa12.82□□□□□ -0.36
CLIP2-209ENST00000493166 ID4P47928 161 aa12.82□□□□□ -0.36
CLIP2-209ENST00000493166 CCT8P50990 548 aa12.82□□□□□ -0.36
CLIP2-209ENST00000493166 GALNT3Q14435 633 aa12.82□□□□□ -0.36
CLIP2-209ENST00000493166 LRRC14Q15048 493 aa12.82□□□□□ -0.36
CLIP2-209ENST00000493166 ACOX1Q15067 660 aa12.82□□□□□ -0.36
CLIP2-209ENST00000493166 PTPRRQ15256 657 aa12.82□□□□□ -0.36
CLIP2-209ENST00000493166 IRF4Q15306 451 aa12.82□□□□□ -0.36
CLIP2-209ENST00000493166 CNGA3Q16281 694 aa12.82□□□□□ -0.36
CLIP2-209ENST00000493166 ZNF423Q2M1K9 1284 aa12.82□□□□□ -0.36
CLIP2-209ENST00000493166 ZNF569Q5MCW4 686 aa12.82□□□□□ -0.36
CLIP2-209ENST00000493166 DENND2CQ68D51 928 aa12.82□□□□□ -0.36
CLIP2-209ENST00000493166 ITPRIPL1Q6GPH6 555 aa12.82□□□□□ -0.36
CLIP2-209ENST00000493166 Q6ZSR6 202 aa12.82□□□□□ -0.36
CLIP2-209ENST00000493166 KDELC2Q7Z4H8 507 aa12.82□□□□□ -0.36
CLIP2-209ENST00000493166 TSPAN33Q86UF1 283 aa12.82□□□□□ -0.36
CLIP2-209ENST00000493166 OXR1Q8N573 874 aa12.82□□□□□ -0.36
CLIP2-209ENST00000493166 TP53I13Q8NBR0 393 aaPredicted RBP12.82□□□□□ -0.36
CLIP2-209ENST00000493166 OR13H1Q8NG92 308 aa12.82□□□□□ -0.36
CLIP2-209ENST00000493166 TADA1Q96BN2 335 aa12.82□□□□□ -0.36
CLIP2-209ENST00000493166 CENPTQ96BT3 561 aa12.82□□□□□ -0.36
CLIP2-209ENST00000493166 BMFQ96LC9 184 aa12.82□□□□□ -0.36
CLIP2-209ENST00000493166 DLL3Q9NYJ7 618 aa12.82□□□□□ -0.36
CLIP2-209ENST00000493166 UBP1Q9NZI7 540 aa12.82□□□□□ -0.36
CLIP2-209ENST00000493166 DNPEPQ9ULA0 475 aa12.82□□□□□ -0.36
CLIP2-209ENST00000493166 FNDC3AQ9Y2H6 1198 aaKnown RBP12.82□□□□□ -0.36
CLIP2-209ENST00000493166 JRKLQ9Y4A0 524 aa12.82□□□□□ -0.36
CLIP2-209ENST00000493166 GOLGA8CPA6NN73 597 aa12.81□□□□□ -0.36
CLIP2-209ENST00000493166 ENC1O14682 589 aa12.81□□□□□ -0.36
CLIP2-209ENST00000493166 KIF5CO60282 957 aa12.81□□□□□ -0.36
CLIP2-209ENST00000493166 RECQL5O94762 991 aaPredicted RBP12.81□□□□□ -0.36
CLIP2-209ENST00000493166 ZNF883P0CG24 379 aa12.81□□□□□ -0.36
CLIP2-209ENST00000493166 LHCGRP22888 699 aa12.81□□□□□ -0.36
CLIP2-209ENST00000493166 CXCR5P32302 372 aa12.81□□□□□ -0.36
CLIP2-209ENST00000493166 CDK18Q07002 472 aa12.81□□□□□ -0.36
CLIP2-209ENST00000493166 PUM1Q14671 1186 aaKnown RBP eCLIP12.81□□□□□ -0.36
CLIP2-209ENST00000493166 AGERQ15109 404 aa12.81□□□□□ -0.36
CLIP2-209ENST00000493166 QPCTQ16769 361 aa12.81□□□□□ -0.36
CLIP2-209ENST00000493166 WSCD2Q2TBF2 565 aa12.81□□□□□ -0.36
CLIP2-209ENST00000493166 ANKRD20A2Q5SQ80 823 aa12.81□□□□□ -0.36
CLIP2-209ENST00000493166 ANKRD20A1Q5TYW2 823 aa12.81□□□□□ -0.36
CLIP2-209ENST00000493166 ANKRD20A3Q5VUR7 823 aa12.81□□□□□ -0.36
CLIP2-209ENST00000493166 LRRC66Q68CR7 880 aa12.81□□□□□ -0.36
CLIP2-209ENST00000493166 CCDC70Q6NSX1 233 aa12.81□□□□□ -0.36
CLIP2-209ENST00000493166 SPATS2Q86XZ4 545 aaKnown RBP12.81□□□□□ -0.36
CLIP2-209ENST00000493166 DCP2Q8IU60 420 aaKnown RBP12.81□□□□□ -0.36
CLIP2-209ENST00000493166 SLC35F6Q8N357 371 aa12.81□□□□□ -0.36
CLIP2-209ENST00000493166 ATG4AQ8WYN0 398 aa12.81□□□□□ -0.36
CLIP2-209ENST00000493166 SPATA13Q96N96 652 aa12.81□□□□□ -0.36
CLIP2-209ENST00000493166 SMIM14Q96QK8 99 aa12.81□□□□□ -0.36
CLIP2-209ENST00000493166 FCRL5Q96RD9 977 aa12.81□□□□□ -0.36
CLIP2-209ENST00000493166 ELF4Q99607 663 aaPredicted RBP12.81□□□□□ -0.36
CLIP2-209ENST00000493166 MLPHQ9BV36 600 aaPredicted RBP12.81□□□□□ -0.36
CLIP2-209ENST00000493166 FRMD8P1Q9BZ68 369 aaPredicted RBP12.81□□□□□ -0.36
CLIP2-209ENST00000493166 GBA3Q9H227 469 aa12.81□□□□□ -0.36
CLIP2-209ENST00000493166 ERVMER34-1Q9H9K5 563 aa12.81□□□□□ -0.36
CLIP2-209ENST00000493166 MBNL1Q9NR56 388 aaKnown RBP12.81□□□□□ -0.36
CLIP2-209ENST00000493166 TM7SF3Q9NS93 570 aa12.81□□□□□ -0.36
CLIP2-209ENST00000493166 FAM153AQ9UHL3 310 aa12.81□□□□□ -0.36
CLIP2-209ENST00000493166 PYCARDQ9ULZ3 195 aa12.81□□□□□ -0.36
CLIP2-209ENST00000493166 ZNF106Q9H2Y7 1883 aaKnown RBP12.8□□□□□ -0.36
CLIP2-209ENST00000493166 A0A1B0GTQ1 180 aa12.8□□□□□ -0.36
CLIP2-209ENST00000493166 ANKRD66B4E2M5 251 aa12.8□□□□□ -0.36
CLIP2-209ENST00000493166 PSMD11O00231 422 aa12.8□□□□□ -0.36
CLIP2-209ENST00000493166 CEP104O60308 925 aa12.8□□□□□ -0.36
CLIP2-209ENST00000493166 PCCBP05166 539 aa12.8□□□□□ -0.36
CLIP2-209ENST00000493166 ZNF30P17039 623 aa12.8□□□□□ -0.36
CLIP2-209ENST00000493166 ARRB1P49407 418 aaPredicted RBP12.8□□□□□ -0.36
CLIP2-209ENST00000493166 THOP1P52888 689 aa12.8□□□□□ -0.36
CLIP2-209ENST00000493166 WNT3AP56704 352 aa12.8□□□□□ -0.36
CLIP2-209ENST00000493166 PFN3P60673 137 aa12.8□□□□□ -0.36
CLIP2-209ENST00000493166 IL9RQ01113 521 aa12.8□□□□□ -0.36
CLIP2-209ENST00000493166 SLC14A1Q13336 389 aa12.8□□□□□ -0.36
CLIP2-209ENST00000493166 PRAMEF14Q5SWL7 426 aa12.8□□□□□ -0.36
CLIP2-209ENST00000493166 CRTC1Q6UUV9 634 aa12.8□□□□□ -0.36
CLIP2-209ENST00000493166 KDM7AQ6ZMT4 941 aa12.8□□□□□ -0.36
CLIP2-209ENST00000493166 HSD11B1LQ7Z5J1 315 aa12.8□□□□□ -0.36
CLIP2-209ENST00000493166 SLC22A18ASQ8N1D0 253 aa12.8□□□□□ -0.36
CLIP2-209ENST00000493166 FAM71DQ8N9W8 422 aa12.8□□□□□ -0.36
CLIP2-209ENST00000493166 SLC35B2Q8TB61 432 aa12.8□□□□□ -0.36
CLIP2-209ENST00000493166 CCDC110Q8TBZ0 833 aa12.8□□□□□ -0.36
CLIP2-209ENST00000493166 NUS1Q96E22 293 aa12.8□□□□□ -0.36
CLIP2-209ENST00000493166 COQ10AQ96MF6 247 aa12.8□□□□□ -0.36
CLIP2-209ENST00000493166 TRIB3Q96RU7 358 aa12.8□□□□□ -0.36
CLIP2-209ENST00000493166 TMEM121Q9BTD3 319 aa12.8□□□□□ -0.36
CLIP2-209ENST00000493166 FSD1LQ9BXM9 530 aa12.8□□□□□ -0.36
CLIP2-209ENST00000493166 USP29Q9HBJ7 922 aa12.8□□□□□ -0.36
CLIP2-209ENST00000493166 KCTD5Q9NXV2 234 aa12.8□□□□□ -0.36
CLIP2-209ENST00000493166 A0A0U1RQS6 177 aa12.79□□□□□ -0.36
CLIP2-209ENST00000493166 C1orf232A0A0U1RR37 186 aa12.79□□□□□ -0.36
CLIP2-209ENST00000493166 DCDC2BA2VCK2 349 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms