RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-215ENST00000492772 MYCLP1P12525 358 aaPredicted RBP11.04□□□□□ -0.64
SND1-215ENST00000492772 CCL4P13236 92 aa11.04□□□□□ -0.64
SND1-215ENST00000492772 CCNB1P14635 433 aa11.04□□□□□ -0.64
SND1-215ENST00000492772 GPD1P21695 349 aa11.04□□□□□ -0.64
SND1-215ENST00000492772 HTR7P34969 479 aa11.04□□□□□ -0.64
SND1-215ENST00000492772 TRIM23P36406 574 aa11.04□□□□□ -0.64
SND1-215ENST00000492772 CASRP41180 1078 aa11.04□□□□□ -0.64
SND1-215ENST00000492772 GPR3P46089 330 aa11.04□□□□□ -0.64
SND1-215ENST00000492772 CCR10P46092 362 aa11.04□□□□□ -0.64
SND1-215ENST00000492772 CSNK1DP48730 415 aa11.04□□□□□ -0.64
SND1-215ENST00000492772 AIF1P55008 147 aa11.04□□□□□ -0.64
SND1-215ENST00000492772 GSCP56915 257 aaPredicted RBP11.04□□□□□ -0.64
SND1-215ENST00000492772 FOXK1P85037 733 aa11.04□□□□□ -0.64
SND1-215ENST00000492772 CDR2Q01850 454 aa11.04□□□□□ -0.64
SND1-215ENST00000492772 ILF3Q12906 894 aaKnown RBP eCLIP11.04□□□□□ -0.64
SND1-215ENST00000492772 RALGDSQ12967 914 aa11.04□□□□□ -0.64
SND1-215ENST00000492772 PEX6Q13608 980 aa11.04□□□□□ -0.64
SND1-215ENST00000492772 TRIM72Q6ZMU5 477 aa11.04□□□□□ -0.64
SND1-215ENST00000492772 DPPA4Q7L190 304 aa11.04□□□□□ -0.64
SND1-215ENST00000492772 C17orf82Q86X59 251 aaPredicted RBP11.04□□□□□ -0.64
SND1-215ENST00000492772 ZSWIM9Q86XI8 627 aa11.04□□□□□ -0.64
SND1-215ENST00000492772 PTRH1Q86Y79 214 aaKnown RBP11.04□□□□□ -0.64
SND1-215ENST00000492772 LURAP1LQ8IV03 231 aa11.04□□□□□ -0.64
SND1-215ENST00000492772 SFTPA2Q8IWL1 248 aa11.04□□□□□ -0.64
SND1-215ENST00000492772 MLKLQ8NB16 471 aa11.04□□□□□ -0.64
SND1-215ENST00000492772 AGBL5Q8NDL9 886 aa11.04□□□□□ -0.64
SND1-215ENST00000492772 RCBTB1Q8NDN9 531 aa11.04□□□□□ -0.64
SND1-215ENST00000492772 ZDHHC1Q8WTX9 485 aa11.04□□□□□ -0.64
SND1-215ENST00000492772 SLC20A1Q8WUM9 679 aa11.04□□□□□ -0.64
SND1-215ENST00000492772 JPH3Q8WXH2 748 aaPredicted RBP11.04□□□□□ -0.64
SND1-215ENST00000492772 CCDC74BQ96LY2 380 aa11.04□□□□□ -0.64
SND1-215ENST00000492772 DPYSL5Q9BPU6 564 aa11.04□□□□□ -0.64
SND1-215ENST00000492772 NUDT22Q9BRQ3 303 aa11.04□□□□□ -0.64
SND1-215ENST00000492772 TUBGCP2Q9BSJ2 902 aa11.04□□□□□ -0.64
SND1-215ENST00000492772 GSDMCQ9BYG8 508 aa11.04□□□□□ -0.64
SND1-215ENST00000492772 STK33Q9BYT3 514 aa11.04□□□□□ -0.64
SND1-215ENST00000492772 MAGEB5Q9BZ81 275 aa11.04□□□□□ -0.64
SND1-215ENST00000492772 PDFQ9HBH1 243 aa11.04□□□□□ -0.64
SND1-215ENST00000492772 MOSPD1Q9UJG1 213 aa11.04□□□□□ -0.64
SND1-215ENST00000492772 NOCTQ9UK39 431 aaKnown RBP11.04□□□□□ -0.64
SND1-215ENST00000492772 TEX15Q9BXT5 2789 aa11.04□□□□□ -0.64
SND1-215ENST00000492772 ARHGEF17Q96PE2 2063 aaPredicted RBP11.04□□□□□ -0.64
SND1-215ENST00000492772 ZFC3H1O60293 1989 aaKnown RBP11.03□□□□□ -0.64
SND1-215ENST00000492772 PES1O00541 588 aaKnown RBP11.03□□□□□ -0.64
SND1-215ENST00000492772 B4GAT1O43505 415 aa11.03□□□□□ -0.64
SND1-215ENST00000492772 CREB3O43889 395 aa11.03□□□□□ -0.64
SND1-215ENST00000492772 BUB1BO60566 1050 aaPredicted RBP11.03□□□□□ -0.64
SND1-215ENST00000492772 PRAMEF11O60813 436 aa11.03□□□□□ -0.64
SND1-215ENST00000492772 PRKCGP05129 697 aa11.03□□□□□ -0.64
SND1-215ENST00000492772 FGF3P11487 239 aaPredicted RBP11.03□□□□□ -0.64
SND1-215ENST00000492772 KRT3P12035 628 aa11.03□□□□□ -0.64
SND1-215ENST00000492772 LIFP15018 202 aa11.03□□□□□ -0.64
SND1-215ENST00000492772 ALDH4A1P30038 563 aa11.03□□□□□ -0.64
SND1-215ENST00000492772 CSTF2P33240 577 aaKnown RBP eCLIP11.03□□□□□ -0.64
SND1-215ENST00000492772 UGT1A3P35503 534 aa11.03□□□□□ -0.64
SND1-215ENST00000492772 LIMK2P53671 638 aa11.03□□□□□ -0.64
SND1-215ENST00000492772 MAZP56270 477 aaKnown RBP11.03□□□□□ -0.64
SND1-215ENST00000492772 OR1D5P58170 312 aa11.03□□□□□ -0.64
SND1-215ENST00000492772 RAB15P59190 212 aa11.03□□□□□ -0.64
SND1-215ENST00000492772 POLR2LP62875 67 aaKnown RBP11.03□□□□□ -0.64
SND1-215ENST00000492772 BIRC2Q13490 618 aa11.03□□□□□ -0.64
SND1-215ENST00000492772 SKIDA1Q1XH10 827 aa11.03□□□□□ -0.64
SND1-215ENST00000492772 AFMIDQ63HM1 303 aa11.03□□□□□ -0.64
SND1-215ENST00000492772 LIPIQ6XZB0 460 aa11.03□□□□□ -0.64
SND1-215ENST00000492772 SRLQ86TD4 932 aa11.03□□□□□ -0.64
SND1-215ENST00000492772 CAMK1DQ8IU85 385 aa11.03□□□□□ -0.64
SND1-215ENST00000492772 CACNA2D3Q8IZS8 1091 aa11.03□□□□□ -0.64
SND1-215ENST00000492772 PYROXD2Q8N2H3 581 aa11.03□□□□□ -0.64
SND1-215ENST00000492772 PAF1Q8N7H5 531 aa11.03□□□□□ -0.64
SND1-215ENST00000492772 OR4D9Q8NGE8 314 aa11.03□□□□□ -0.64
SND1-215ENST00000492772 CCL4L1Q8NHW4 92 aa11.03□□□□□ -0.64
SND1-215ENST00000492772 ECHDC3Q96DC8 303 aa11.03□□□□□ -0.64
SND1-215ENST00000492772 SELENOOQ9BVL4 669 aa11.03□□□□□ -0.64
SND1-215ENST00000492772 ASPSCR1Q9BZE9 553 aa11.03□□□□□ -0.64
SND1-215ENST00000492772 CARS2Q9HA77 564 aaKnown RBP11.03□□□□□ -0.64
SND1-215ENST00000492772 PHPT1Q9NRX4 125 aaPredicted RBP11.03□□□□□ -0.64
SND1-215ENST00000492772 TRNAU1APQ9NX07 287 aaKnown RBP11.03□□□□□ -0.64
SND1-215ENST00000492772 KCTD5Q9NXV2 234 aa11.03□□□□□ -0.64
SND1-215ENST00000492772 CLEC18AA5D8T8 446 aa11.02□□□□□ -0.65
SND1-215ENST00000492772 ANKRD62A6NC57 917 aa11.02□□□□□ -0.65
SND1-215ENST00000492772 GADD45BO75293 160 aaPredicted RBP11.02□□□□□ -0.65
SND1-215ENST00000492772 GFPT2O94808 682 aa11.02□□□□□ -0.65
SND1-215ENST00000492772 CALB1P05937 261 aa11.02□□□□□ -0.65
SND1-215ENST00000492772 THRAP10827 490 aa11.02□□□□□ -0.65
SND1-215ENST00000492772 CR2P20023 1033 aa11.02□□□□□ -0.65
SND1-215ENST00000492772 CD1CP29017 333 aa11.02□□□□□ -0.65
SND1-215ENST00000492772 RFC1P35251 1148 aaPredicted RBP11.02□□□□□ -0.65
SND1-215ENST00000492772 NSFP46459 744 aaKnown RBP11.02□□□□□ -0.65
SND1-215ENST00000492772 ARSDP51689 593 aa11.02□□□□□ -0.65
SND1-215ENST00000492772 NDST2P52849 883 aa11.02□□□□□ -0.65
SND1-215ENST00000492772 FMO1Q01740 532 aa11.02□□□□□ -0.65
SND1-215ENST00000492772 BCL2L1Q07817 233 aa11.02□□□□□ -0.65
SND1-215ENST00000492772 ACOX1Q15067 660 aa11.02□□□□□ -0.65
SND1-215ENST00000492772 PNCKQ6P2M8 343 aa11.02□□□□□ -0.65
SND1-215ENST00000492772 CLEC18BQ6UXF7 455 aa11.02□□□□□ -0.65
SND1-215ENST00000492772 PHLDB2Q86SQ0 1253 aa11.02□□□□□ -0.65
SND1-215ENST00000492772 CLEC18CQ8NCF0 446 aa11.02□□□□□ -0.65
SND1-215ENST00000492772 C3orf20Q8ND61 904 aa11.02□□□□□ -0.65
SND1-215ENST00000492772 SLC30A5Q8TAD4 765 aa11.02□□□□□ -0.65
SND1-215ENST00000492772 C9orf43Q8TAL5 461 aaPredicted RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms