RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 KLF10Q13118 480 aa7.36□□□□□ -1.23
NPHP3-208ENST00000490993 ZNF783Q6ZMS7 281 aa7.36□□□□□ -1.23
NPHP3-208ENST00000490993 PAQR9Q6ZVX9 377 aa7.36□□□□□ -1.23
NPHP3-208ENST00000490993 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.36□□□□□ -1.236e-7■■■■■ 139.2
NPHP3-208ENST00000490993 ASPSCR1Q9BZE9 553 aa7.36□□□□□ -1.23
NPHP3-208ENST00000490993 RMND5AQ9H871 391 aa7.36□□□□□ -1.23
NPHP3-208ENST00000490993 BBIP1A8MTZ0 92 aa7.36□□□□□ -1.23
NPHP3-208ENST00000490993 MAFKO60675 156 aa7.36□□□□□ -1.23
NPHP3-208ENST00000490993 GALTP07902 379 aa7.36□□□□□ -1.23
NPHP3-208ENST00000490993 PKMP14618 531 aaKnown RBP7.36□□□□□ -1.23
NPHP3-208ENST00000490993 GABRR2P28476 465 aa7.36□□□□□ -1.23
NPHP3-208ENST00000490993 SLC10A7Q0GE19 358 aa7.36□□□□□ -1.23
NPHP3-208ENST00000490993 USP4Q13107 963 aa7.36□□□□□ -1.23
NPHP3-208ENST00000490993 NFYCQ13952 458 aa7.36□□□□□ -1.23
NPHP3-208ENST00000490993 GALNTL6Q49A17 601 aa7.36□□□□□ -1.23
NPHP3-208ENST00000490993 MBLAC2Q68D91 279 aa7.36□□□□□ -1.23
NPHP3-208ENST00000490993 TMEM154Q6P9G4 183 aa7.36□□□□□ -1.23
NPHP3-208ENST00000490993 TRPV1Q8NER1 839 aa7.36□□□□□ -1.23
NPHP3-208ENST00000490993 CDRT15Q96T59 188 aa7.36□□□□□ -1.23
NPHP3-208ENST00000490993 ASB8Q9H765 288 aa7.36□□□□□ -1.23
NPHP3-208ENST00000490993 PHF24Q9UPV7 400 aa7.36□□□□□ -1.23
NPHP3-208ENST00000490993 TRAF6Q9Y4K3 522 aa7.36□□□□□ -1.23
NPHP3-208ENST00000490993 BACE2Q9Y5Z0 518 aa7.36□□□□□ -1.23
NPHP3-208ENST00000490993 AZIN1O14977 448 aa7.36□□□□□ -1.23
NPHP3-208ENST00000490993 GRM6O15303 877 aa7.36□□□□□ -1.23
NPHP3-208ENST00000490993 KDELR3O43731 214 aa7.36□□□□□ -1.23
NPHP3-208ENST00000490993 GOT2P00505 430 aaKnown RBP7.36□□□□□ -1.23
NPHP3-208ENST00000490993 TCN1P20061 433 aaPredicted RBP7.36□□□□□ -1.23
NPHP3-208ENST00000490993 MPSTP25325 297 aa7.36□□□□□ -1.23
NPHP3-208ENST00000490993 GPR15P49685 360 aa7.36□□□□□ -1.23
NPHP3-208ENST00000490993 PLK1P53350 603 aa7.36□□□□□ -1.23
NPHP3-208ENST00000490993 XIAPP98170 497 aa7.36□□□□□ -1.23
NPHP3-208ENST00000490993 SLC25A3Q00325 362 aa7.36□□□□□ -1.23
NPHP3-208ENST00000490993 SATB1Q01826 763 aa7.36□□□□□ -1.23
NPHP3-208ENST00000490993 ARL13AQ5H913 290 aaPredicted RBP7.36□□□□□ -1.23
NPHP3-208ENST00000490993 UBAP2Q5T6F2 1119 aaKnown RBP7.36□□□□□ -1.23
NPHP3-208ENST00000490993 LAYNQ6UX15 382 aa7.36□□□□□ -1.23
NPHP3-208ENST00000490993 RINLQ6ZS11 566 aa7.36□□□□□ -1.23
NPHP3-208ENST00000490993 DENND6AQ8IWF6 608 aa7.36□□□□□ -1.23
NPHP3-208ENST00000490993 CNTD1Q8N815 330 aa7.36□□□□□ -1.23
NPHP3-208ENST00000490993 C2CD4AQ8NCU7 369 aaPredicted RBP7.36□□□□□ -1.23
NPHP3-208ENST00000490993 OR7D4Q8NG98 312 aa7.36□□□□□ -1.23
NPHP3-208ENST00000490993 OR4K2Q8NGD2 314 aa7.36□□□□□ -1.23
NPHP3-208ENST00000490993 CDC26Q8NHZ8 85 aa7.36□□□□□ -1.23
NPHP3-208ENST00000490993 GANCQ8TET4 914 aa7.36□□□□□ -1.23
NPHP3-208ENST00000490993 KHSRPQ92945 711 aaKnown RBP eCLIP7.36□□□□□ -1.234e-6■■■■□ 22.3
NPHP3-208ENST00000490993 FAM136AQ96C01 138 aa7.36□□□□□ -1.23
NPHP3-208ENST00000490993 TBATAQ96M53 351 aa7.36□□□□□ -1.23
NPHP3-208ENST00000490993 CREBZFQ9NS37 354 aa7.36□□□□□ -1.23
NPHP3-208ENST00000490993 TBC1D14Q9P2M4 693 aa7.36□□□□□ -1.23
NPHP3-208ENST00000490993 RWDD3Q9Y3V2 267 aa7.36□□□□□ -1.23
NPHP3-208ENST00000490993 MTF2Q9Y483 593 aaPredicted RBP7.36□□□□□ -1.23
NPHP3-208ENST00000490993 CXCL14O95715 111 aa7.36□□□□□ -1.23
NPHP3-208ENST00000490993 GLUD1P00367 558 aa7.36□□□□□ -1.23
NPHP3-208ENST00000490993 DHRS4L1P0CG22 281 aa7.36□□□□□ -1.23
NPHP3-208ENST00000490993 MSH3P20585 1137 aa7.36□□□□□ -1.23
NPHP3-208ENST00000490993 GCAP28676 217 aa7.36□□□□□ -1.23
NPHP3-208ENST00000490993 TAS2R39P59534 338 aa7.36□□□□□ -1.23
NPHP3-208ENST00000490993 KRT33BQ14525 404 aa7.36□□□□□ -1.23
NPHP3-208ENST00000490993 RNF19BQ6ZMZ0 732 aa7.36□□□□□ -1.23
NPHP3-208ENST00000490993 RIPOR1Q6ZS17 1223 aa7.36□□□□□ -1.23
NPHP3-208ENST00000490993 MILR1Q7Z6M3 343 aa7.36□□□□□ -1.23
NPHP3-208ENST00000490993 HS6ST3Q8IZP7 471 aa7.36□□□□□ -1.23
NPHP3-208ENST00000490993 ZMIZ2Q8NF64 920 aa7.36□□□□□ -1.23
NPHP3-208ENST00000490993 HEXDCQ8WVB3 486 aa7.36□□□□□ -1.23
NPHP3-208ENST00000490993 IMP4Q96G21 291 aaKnown RBP7.36□□□□□ -1.23
NPHP3-208ENST00000490993 TSC22D3Q99576 134 aa7.36□□□□□ -1.23
NPHP3-208ENST00000490993 PRPF18Q99633 342 aaKnown RBP7.36□□□□□ -1.23
NPHP3-208ENST00000490993 C11orf84Q9BUA3 381 aaPredicted RBP7.36□□□□□ -1.23
NPHP3-208ENST00000490993 PLA2G4CQ9UP65 541 aa7.36□□□□□ -1.23
NPHP3-208ENST00000490993 YIPF1Q9Y548 306 aa7.36□□□□□ -1.23
NPHP3-208ENST00000490993 RGS14O43566 566 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 BUD23O43709 281 aaKnown RBP7.35□□□□□ -1.23
NPHP3-208ENST00000490993 TBX18O95935 607 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 SOD2P04179 222 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 HIST2H2ACQ16777 129 aaPredicted RBP7.35□□□□□ -1.23
NPHP3-208ENST00000490993 SIRPB2Q5JXA9 342 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 C6orf10Q5SRN2 563 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 HIST2H2AA3Q6FI13 130 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 TPGS1Q6ZTW0 290 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 FBXW8Q8N3Y1 598 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 VPS37AQ8NEZ2 397 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 ZNF461Q8TAF7 563 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 METTL6Q8TCB7 284 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 AZIN2Q96A70 460 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 NRBF2Q96F24 287 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 CORO1BQ9BR76 489 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 ZCCHC2Q9C0B9 1178 aaKnown RBP7.35□□□□□ -1.23
NPHP3-208ENST00000490993 UNC93B1Q9H1C4 597 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 TFB2MQ9H5Q4 396 aaKnown RBP7.35□□□□□ -1.23
NPHP3-208ENST00000490993 CCSER2Q9H7U1 834 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 POPDC3Q9HBV1 291 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 TMLHEQ9NVH6 421 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 THG1LQ9NWX6 298 aaKnown RBP7.35□□□□□ -1.23
NPHP3-208ENST00000490993 CFAP97Q9P2B7 532 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 DNAJB4Q9UDY4 337 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 PCDHGB4Q9UN71 923 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 ARHGAP10A1A4S6 786 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 CCDC189A1A4V9 331 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 TRIM38O00635 465 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms