RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 EPS8L1Q8TE68 723 aa14.01□□□□□ -0.17
VARS-227ENST00000489979 ZDHHC1Q8WTX9 485 aa14.01□□□□□ -0.17
VARS-227ENST00000489979 SLC20A1Q8WUM9 679 aa14.01□□□□□ -0.17
VARS-227ENST00000489979 C11orf70Q9BRQ4 267 aa14.01□□□□□ -0.17
VARS-227ENST00000489979 NAA15Q9BXJ9 866 aaKnown RBP14.01□□□□□ -0.17
VARS-227ENST00000489979 CDH19Q9H159 772 aa14.01□□□□□ -0.17
VARS-227ENST00000489979 NDST4Q9H3R1 872 aa14.01□□□□□ -0.17
VARS-227ENST00000489979 SUDS3Q9H7L9 328 aaPredicted RBP14.01□□□□□ -0.17
VARS-227ENST00000489979 TUBD1Q9UJT1 453 aa14.01□□□□□ -0.17
VARS-227ENST00000489979 B3GALT1Q9Y5Z6 326 aa14.01□□□□□ -0.17
VARS-227ENST00000489979 PRSS38A1L453 326 aa14□□□□□ -0.17
VARS-227ENST00000489979 TEX33O43247 280 aa14□□□□□ -0.17
VARS-227ENST00000489979 CREB3O43889 395 aa14□□□□□ -0.17
VARS-227ENST00000489979 GADD45BO75293 160 aaPredicted RBP14□□□□□ -0.17
VARS-227ENST00000489979 FGF1P05230 155 aa14□□□□□ -0.17
VARS-227ENST00000489979 ELFN1P0C7U0 828 aa14□□□□□ -0.17
VARS-227ENST00000489979 PRKCSHP14314 528 aaPredicted RBP14□□□□□ -0.17
VARS-227ENST00000489979 CCNB1P14635 433 aa14□□□□□ -0.17
VARS-227ENST00000489979 GM2AP17900 193 aa14□□□□□ -0.17
VARS-227ENST00000489979 MMP8P22894 467 aa14□□□□□ -0.17
VARS-227ENST00000489979 CD1CP29017 333 aa14□□□□□ -0.17
VARS-227ENST00000489979 TRIM23P36406 574 aa14□□□□□ -0.17
VARS-227ENST00000489979 CASRP41180 1078 aa14□□□□□ -0.17
VARS-227ENST00000489979 STAT1P42224 750 aa14□□□□□ -0.17
VARS-227ENST00000489979 LIMK2P53671 638 aa14□□□□□ -0.17
VARS-227ENST00000489979 NR1D2Q14995 579 aa14□□□□□ -0.17
VARS-227ENST00000489979 CLPPQ16740 277 aaPredicted RBP14□□□□□ -0.17
VARS-227ENST00000489979 TPD52L1Q16890 204 aaPredicted RBP14□□□□□ -0.17
VARS-227ENST00000489979 TSR1Q2NL82 804 aaKnown RBP14□□□□□ -0.17
VARS-227ENST00000489979 MIIPQ5JXC2 388 aa14□□□□□ -0.17
VARS-227ENST00000489979 LIPIQ6XZB0 460 aa14□□□□□ -0.17
VARS-227ENST00000489979 SLFN11Q7Z7L1 901 aa14□□□□□ -0.17
VARS-227ENST00000489979 NRROSQ86YC3 692 aa14□□□□□ -0.17
VARS-227ENST00000489979 CACNA2D3Q8IZS8 1091 aa14□□□□□ -0.17
VARS-227ENST00000489979 SLC30A5Q8TAD4 765 aa14□□□□□ -0.17
VARS-227ENST00000489979 ART4Q93070 314 aa14□□□□□ -0.17
VARS-227ENST00000489979 TUBGCP5Q96RT8 1024 aa14□□□□□ -0.17
VARS-227ENST00000489979 WDR26Q9H7D7 661 aa14□□□□□ -0.17
VARS-227ENST00000489979 CARS2Q9HA77 564 aaKnown RBP14□□□□□ -0.17
VARS-227ENST00000489979 PDFQ9HBH1 243 aa14□□□□□ -0.17
VARS-227ENST00000489979 ZNF71Q9NQZ8 489 aaPredicted RBP14□□□□□ -0.17
VARS-227ENST00000489979 TEX15Q9BXT5 2789 aa14□□□□□ -0.17
VARS-227ENST00000489979 USP9YO00507 2555 aaPredicted RBP14□□□□□ -0.17
VARS-227ENST00000489979 CLEC18AA5D8T8 446 aa13.99□□□□□ -0.17
VARS-227ENST00000489979 ZNF891A8MT65 544 aaPredicted RBP13.99□□□□□ -0.17
VARS-227ENST00000489979 WASH4PA8MWX3 477 aa13.99□□□□□ -0.17
VARS-227ENST00000489979 F8VZ95 297 aa13.99□□□□□ -0.17
VARS-227ENST00000489979 J3KR12 359 aa13.99□□□□□ -0.17
VARS-227ENST00000489979 ZW10O43264 779 aa13.99□□□□□ -0.17
VARS-227ENST00000489979 ECEL1O95672 775 aa13.99□□□□□ -0.17
VARS-227ENST00000489979 CYP1A1P04798 512 aaPredicted RBP13.99□□□□□ -0.17
VARS-227ENST00000489979 UCHL3P15374 230 aa13.99□□□□□ -0.17
VARS-227ENST00000489979 MPSTP25325 297 aa13.99□□□□□ -0.17
VARS-227ENST00000489979 RGRP47804 291 aa13.99□□□□□ -0.17
VARS-227ENST00000489979 FMO1Q01740 532 aa13.99□□□□□ -0.17
VARS-227ENST00000489979 TRA2AQ13595 282 aaKnown RBP eCLIP13.99□□□□□ -0.17
VARS-227ENST00000489979 NKAIN2Q5VXU1 208 aa13.99□□□□□ -0.17
VARS-227ENST00000489979 PNCKQ6P2M8 343 aa13.99□□□□□ -0.17
VARS-227ENST00000489979 CLEC18BQ6UXF7 455 aa13.99□□□□□ -0.17
VARS-227ENST00000489979 SRLQ86TD4 932 aa13.99□□□□□ -0.17
VARS-227ENST00000489979 UMODL1-AS1Q8N2C9 162 aa13.99□□□□□ -0.17
VARS-227ENST00000489979 CLEC18CQ8NCF0 446 aa13.99□□□□□ -0.17
VARS-227ENST00000489979 AGBL5Q8NDL9 886 aa13.99□□□□□ -0.17
VARS-227ENST00000489979 CCDC112Q8NEF3 446 aa13.99□□□□□ -0.17
VARS-227ENST00000489979 CATSPER2Q96P56 530 aa13.99□□□□□ -0.17
VARS-227ENST00000489979 GSDMCQ9BYG8 508 aa13.99□□□□□ -0.17
VARS-227ENST00000489979 STK33Q9BYT3 514 aa13.99□□□□□ -0.17
VARS-227ENST00000489979 ATP13A3Q9H7F0 1226 aa13.99□□□□□ -0.17
VARS-227ENST00000489979 CATSPERBQ9H7T0 1116 aa13.99□□□□□ -0.17
VARS-227ENST00000489979 SLC39A1Q9NY26 324 aa13.99□□□□□ -0.17
VARS-227ENST00000489979 TAAR2Q9P1P5 351 aa13.99□□□□□ -0.17
VARS-227ENST00000489979 KIAA1468Q9P260 1216 aa13.99□□□□□ -0.17
VARS-227ENST00000489979 ANAPC2Q9UJX6 822 aa13.99□□□□□ -0.17
VARS-227ENST00000489979 NOCTQ9UK39 431 aaKnown RBP13.99□□□□□ -0.17
VARS-227ENST00000489979 MAN2B2Q9Y2E5 1009 aa13.99□□□□□ -0.17
VARS-227ENST00000489979 SPENQ96T58 3664 aaKnown RBP13.99□□□□□ -0.17
VARS-227ENST00000489979 A8MX80 341 aa13.98□□□□□ -0.17
VARS-227ENST00000489979 PDE2AO00408 941 aaPredicted RBP13.98□□□□□ -0.17
VARS-227ENST00000489979 PES1O00541 588 aaKnown RBP13.98□□□□□ -0.17
VARS-227ENST00000489979 NKX2-8O15522 239 aa13.98□□□□□ -0.17
VARS-227ENST00000489979 RAD1O60671 282 aa13.98□□□□□ -0.17
VARS-227ENST00000489979 KRT3P12035 628 aa13.98□□□□□ -0.17
VARS-227ENST00000489979 CHRNB2P17787 502 aa13.98□□□□□ -0.17
VARS-227ENST00000489979 GPD1P21695 349 aa13.98□□□□□ -0.17
VARS-227ENST00000489979 AK4P27144 223 aaPredicted RBP13.98□□□□□ -0.17
VARS-227ENST00000489979 SERPINA4P29622 427 aa13.98□□□□□ -0.17
VARS-227ENST00000489979 CSTF2P33240 577 aaKnown RBP eCLIP13.98□□□□□ -0.17
VARS-227ENST00000489979 RFC1P35251 1148 aaPredicted RBP13.98□□□□□ -0.17
VARS-227ENST00000489979 GPR3P46089 330 aa13.98□□□□□ -0.17
VARS-227ENST00000489979 CDR2Q01850 454 aa13.98□□□□□ -0.17
VARS-227ENST00000489979 ILF3Q12906 894 aaKnown RBP eCLIP13.98□□□□□ -0.17
VARS-227ENST00000489979 BIRC2Q13490 618 aa13.98□□□□□ -0.17
VARS-227ENST00000489979 NCAPHQ15003 741 aa13.98□□□□□ -0.17
VARS-227ENST00000489979 ACOX1Q15067 660 aa13.98□□□□□ -0.17
VARS-227ENST00000489979 HSP90AA4PQ58FG1 418 aa13.98□□□□□ -0.17
VARS-227ENST00000489979 AFMIDQ63HM1 303 aa13.98□□□□□ -0.17
VARS-227ENST00000489979 SCYL2Q6P3W7 929 aa13.98□□□□□ -0.17
VARS-227ENST00000489979 DPPA4Q7L190 304 aa13.98□□□□□ -0.17
VARS-227ENST00000489979 ZNF677Q86XU0 584 aa13.98□□□□□ -0.17
VARS-227ENST00000489979 PAF1Q8N7H5 531 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms