RNA–Protein interactions for RNA: ENST00000489858.1

RAB3GAP1-205, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2

Gene RAB3GAP1, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-205ENST00000489858 NXNL1Q96CM4 212 aa9.61□□□□□ -0.87
RAB3GAP1-205ENST00000489858 CLPTM1LQ96KA5 538 aa9.61□□□□□ -0.87
RAB3GAP1-205ENST00000489858 CNDP1Q96KN2 507 aa9.61□□□□□ -0.87
RAB3GAP1-205ENST00000489858 CEP295NLQ96MC4 621 aa9.61□□□□□ -0.87
RAB3GAP1-205ENST00000489858 GPR78Q96P69 363 aa9.61□□□□□ -0.87
RAB3GAP1-205ENST00000489858 CASD1Q96PB1 797 aa9.61□□□□□ -0.87
RAB3GAP1-205ENST00000489858 OR52B2Q96RD2 323 aa9.61□□□□□ -0.87
RAB3GAP1-205ENST00000489858 OMDQ99983 421 aa9.61□□□□□ -0.87
RAB3GAP1-205ENST00000489858 TTLL2Q9BWV7 592 aa9.61□□□□□ -0.87
RAB3GAP1-205ENST00000489858 GPR62Q9BZJ7 368 aa9.61□□□□□ -0.87
RAB3GAP1-205ENST00000489858 EML4Q9HC35 981 aaKnown RBP9.61□□□□□ -0.87
RAB3GAP1-205ENST00000489858 IGSF5Q9NSI5 407 aa9.61□□□□□ -0.87
RAB3GAP1-205ENST00000489858 MRGBPQ9NV56 204 aa9.61□□□□□ -0.87
RAB3GAP1-205ENST00000489858 GTSE1Q9NYZ3 720 aa9.61□□□□□ -0.87
RAB3GAP1-205ENST00000489858 NCKIPSDQ9NZQ3 722 aa9.61□□□□□ -0.87
RAB3GAP1-205ENST00000489858 UXTQ9UBK9 157 aaPredicted RBP9.61□□□□□ -0.87
RAB3GAP1-205ENST00000489858 PRPF19Q9UMS4 504 aaKnown RBP9.61□□□□□ -0.87
RAB3GAP1-205ENST00000489858 PHF24Q9UPV7 400 aa9.61□□□□□ -0.87
RAB3GAP1-205ENST00000489858 LOC285095A0A1B0GVY8 99 aa9.6□□□□□ -0.87
RAB3GAP1-205ENST00000489858 MROH6A6NGR9 719 aa9.6□□□□□ -0.87
RAB3GAP1-205ENST00000489858 ENPP3O14638 875 aa9.6□□□□□ -0.87
RAB3GAP1-205ENST00000489858 GRID2O43424 1007 aa9.6□□□□□ -0.87
RAB3GAP1-205ENST00000489858 ZBTB14O43829 449 aa9.6□□□□□ -0.87
RAB3GAP1-205ENST00000489858 TBC1D4O60343 1298 aa9.6□□□□□ -0.87
RAB3GAP1-205ENST00000489858 AOC2O75106 756 aa9.6□□□□□ -0.87
RAB3GAP1-205ENST00000489858 TBX10O75333 385 aa9.6□□□□□ -0.87
RAB3GAP1-205ENST00000489858 RPP40O75818 363 aaKnown RBP9.6□□□□□ -0.87
RAB3GAP1-205ENST00000489858 SOAT2O75908 522 aa9.6□□□□□ -0.87
RAB3GAP1-205ENST00000489858 TBX18O95935 607 aa9.6□□□□□ -0.87
RAB3GAP1-205ENST00000489858 GNRH1P01148 92 aa9.6□□□□□ -0.87
RAB3GAP1-205ENST00000489858 ATXN1LP0C7T5 689 aaKnown RBP9.6□□□□□ -0.87
RAB3GAP1-205ENST00000489858 ANPEPP15144 967 aa9.6□□□□□ -0.87
RAB3GAP1-205ENST00000489858 PPARGP37231 505 aaPredicted RBP9.6□□□□□ -0.87
RAB3GAP1-205ENST00000489858 ETFBP38117 255 aa9.6□□□□□ -0.87
RAB3GAP1-205ENST00000489858 SLC26A3P40879 764 aa9.6□□□□□ -0.87
RAB3GAP1-205ENST00000489858 SLC11A2P49281 568 aa9.6□□□□□ -0.87
RAB3GAP1-205ENST00000489858 ACVR1Q04771 509 aa9.6□□□□□ -0.87
RAB3GAP1-205ENST00000489858 NSUN2Q08J23 767 aaKnown RBP eCLIP9.6□□□□□ -0.87
RAB3GAP1-205ENST00000489858 TBL3Q12788 808 aaKnown RBP9.6□□□□□ -0.87
RAB3GAP1-205ENST00000489858 DLG1Q12959 904 aa9.6□□□□□ -0.87
RAB3GAP1-205ENST00000489858 MSLNQ13421 630 aaPredicted RBP9.6□□□□□ -0.87
RAB3GAP1-205ENST00000489858 NR6A1Q15406 480 aa9.6□□□□□ -0.87
RAB3GAP1-205ENST00000489858 RNFT1Q5M7Z0 435 aa9.6□□□□□ -0.87
RAB3GAP1-205ENST00000489858 RBM20Q5T481 1227 aaKnown RBP9.6□□□□□ -0.87
RAB3GAP1-205ENST00000489858 RASIP1Q5U651 963 aa9.6□□□□□ -0.87
RAB3GAP1-205ENST00000489858 TRIM68Q6AZZ1 485 aa9.6□□□□□ -0.87
RAB3GAP1-205ENST00000489858 NXNQ6DKJ4 435 aa9.6□□□□□ -0.87
RAB3GAP1-205ENST00000489858 C16orf89Q6UX73 402 aa9.6□□□□□ -0.87
RAB3GAP1-205ENST00000489858 CIR1Q86X95 450 aaPredicted RBP9.6□□□□□ -0.87
RAB3GAP1-205ENST00000489858 SNX32Q86XE0 403 aa9.6□□□□□ -0.87
RAB3GAP1-205ENST00000489858 CILP2Q8IUL8 1156 aa9.6□□□□□ -0.87
RAB3GAP1-205ENST00000489858 SLC22A9Q8IVM8 553 aa9.6□□□□□ -0.87
RAB3GAP1-205ENST00000489858 LGI2Q8N0V4 545 aa9.6□□□□□ -0.87
RAB3GAP1-205ENST00000489858 LSMEM2Q8N112 164 aa9.6□□□□□ -0.87
RAB3GAP1-205ENST00000489858 LRRC43Q8N309 656 aa9.6□□□□□ -0.87
RAB3GAP1-205ENST00000489858 PHTF2Q8N3S3 785 aa9.6□□□□□ -0.87
RAB3GAP1-205ENST00000489858 CPSF7Q8N684 471 aaKnown RBP9.6□□□□□ -0.87
RAB3GAP1-205ENST00000489858 TXNDC5Q8NBS9 432 aaKnown RBP9.6□□□□□ -0.87
RAB3GAP1-205ENST00000489858 OR13J1Q8NGT2 312 aa9.6□□□□□ -0.87
RAB3GAP1-205ENST00000489858 OR6P1Q8NGX9 317 aa9.6□□□□□ -0.87
RAB3GAP1-205ENST00000489858 DTX3LQ8TDB6 740 aa9.6□□□□□ -0.87
RAB3GAP1-205ENST00000489858 GPR152Q8TDT2 470 aa9.6□□□□□ -0.87
RAB3GAP1-205ENST00000489858 OVCA2Q8WZ82 227 aa9.6□□□□□ -0.87
RAB3GAP1-205ENST00000489858 B3GALT6Q96L58 329 aa9.6□□□□□ -0.87
RAB3GAP1-205ENST00000489858 NDNQ99608 321 aa9.6□□□□□ -0.87
RAB3GAP1-205ENST00000489858 OLFM1Q99784 485 aa9.6□□□□□ -0.87
RAB3GAP1-205ENST00000489858 SEMA3CQ99985 751 aa9.6□□□□□ -0.87
RAB3GAP1-205ENST00000489858 OCSTAMPQ9BR26 566 aa9.6□□□□□ -0.87
RAB3GAP1-205ENST00000489858 TTPALQ9BTX7 342 aa9.6□□□□□ -0.87
RAB3GAP1-205ENST00000489858 CXorf56Q9H5V9 222 aa9.6□□□□□ -0.87
RAB3GAP1-205ENST00000489858 ZNF385DQ9H6B1 395 aa9.6□□□□□ -0.87
RAB3GAP1-205ENST00000489858 CCSER2Q9H7U1 834 aa9.6□□□□□ -0.87
RAB3GAP1-205ENST00000489858 CYP4F11Q9HBI6 524 aa9.6□□□□□ -0.87
RAB3GAP1-205ENST00000489858 TRPC7Q9HCX4 862 aa9.6□□□□□ -0.87
RAB3GAP1-205ENST00000489858 HMX1Q9NP08 348 aaPredicted RBP9.6□□□□□ -0.87
RAB3GAP1-205ENST00000489858 MAN1C1Q9NR34 630 aa9.6□□□□□ -0.87
RAB3GAP1-205ENST00000489858 SEPT3Q9UH03 358 aa9.6□□□□□ -0.87
RAB3GAP1-205ENST00000489858 CDH22Q9UJ99 828 aa9.6□□□□□ -0.87
RAB3GAP1-205ENST00000489858 RIMKLBQ9ULI2 386 aa9.6□□□□□ -0.87
RAB3GAP1-205ENST00000489858 SSX2IPQ9Y2D8 614 aa9.6□□□□□ -0.87
RAB3GAP1-205ENST00000489858 LRCH1Q9Y2L9 728 aa9.6□□□□□ -0.87
RAB3GAP1-205ENST00000489858 ANKRD36A6QL64 1941 aa9.6□□□□□ -0.87
RAB3GAP1-205ENST00000489858 TBKBP1A7MCY6 615 aa9.59□□□□□ -0.87
RAB3GAP1-205ENST00000489858 A8MT66 165 aa9.59□□□□□ -0.87
RAB3GAP1-205ENST00000489858 AURKAO14965 403 aa9.59□□□□□ -0.87
RAB3GAP1-205ENST00000489858 ACSL4O60488 711 aa9.59□□□□□ -0.87
RAB3GAP1-205ENST00000489858 NBNO60934 754 aa9.59□□□□□ -0.87
RAB3GAP1-205ENST00000489858 SMIM24O75264 130 aa9.59□□□□□ -0.87
RAB3GAP1-205ENST00000489858 VNN2O95498 520 aa9.59□□□□□ -0.87
RAB3GAP1-205ENST00000489858 EPOP01588 193 aa9.59□□□□□ -0.87
RAB3GAP1-205ENST00000489858 SERPINF2P08697 491 aa9.59□□□□□ -0.87
RAB3GAP1-205ENST00000489858 OGNP20774 298 aaKnown RBP9.59□□□□□ -0.87
RAB3GAP1-205ENST00000489858 OR1E1P30953 314 aa9.59□□□□□ -0.87
RAB3GAP1-205ENST00000489858 ACVRL1P37023 503 aa9.59□□□□□ -0.87
RAB3GAP1-205ENST00000489858 CCR10P46092 362 aa9.59□□□□□ -0.87
RAB3GAP1-205ENST00000489858 GATMP50440 423 aa9.59□□□□□ -0.87
RAB3GAP1-205ENST00000489858 EPHB1P54762 984 aa9.59□□□□□ -0.87
RAB3GAP1-205ENST00000489858 OXCT1P55809 520 aa9.59□□□□□ -0.87
RAB3GAP1-205ENST00000489858 MRPS35P82673 323 aaKnown RBP9.59□□□□□ -0.87
RAB3GAP1-205ENST00000489858 BLMHQ13867 455 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms