RNA–Protein interactions for RNA: ENST00000489303.1

LMO4-203, Transcript of LIM domain only 4, humanhuman

TSL 2

Gene LMO4, Length 952 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-203ENST00000489303 RFPL3O75679 317 aa13.55□□□□□ -0.24
LMO4-203ENST00000489303 RECQL5O94762 991 aaPredicted RBP13.55□□□□□ -0.24
LMO4-203ENST00000489303 PGLSO95336 258 aa13.55□□□□□ -0.24
LMO4-203ENST00000489303 PCCBP05166 539 aa13.55□□□□□ -0.24
LMO4-203ENST00000489303 VIPR1P32241 457 aa13.55□□□□□ -0.24
LMO4-203ENST00000489303 BLKP51451 505 aa13.55□□□□□ -0.24
LMO4-203ENST00000489303 PPARDQ03181 441 aa13.55□□□□□ -0.24
LMO4-203ENST00000489303 PPIDQ08752 370 aaKnown RBP13.55□□□□□ -0.24
LMO4-203ENST00000489303 AP1B1Q10567 949 aa13.55□□□□□ -0.24
LMO4-203ENST00000489303 TRAF2Q12933 501 aa13.55□□□□□ -0.24
LMO4-203ENST00000489303 MTM1Q13496 603 aa13.55□□□□□ -0.24
LMO4-203ENST00000489303 ARHGEF7Q14155 803 aa13.55□□□□□ -0.24
LMO4-203ENST00000489303 INPP5AQ14642 412 aa13.55□□□□□ -0.24
LMO4-203ENST00000489303 SMAD1Q15797 465 aaKnown RBP13.55□□□□□ -0.24
LMO4-203ENST00000489303 WSCD2Q2TBF2 565 aa13.55□□□□□ -0.24
LMO4-203ENST00000489303 FAXCQ5TGI0 409 aa13.55□□□□□ -0.24
LMO4-203ENST00000489303 SLC9A4Q6AI14 798 aa13.55□□□□□ -0.24
LMO4-203ENST00000489303 C11orf63Q6NUN7 778 aa13.55□□□□□ -0.24
LMO4-203ENST00000489303 MACC1Q6ZN28 852 aa13.55□□□□□ -0.24
LMO4-203ENST00000489303 DAAM2Q86T65 1068 aa13.55□□□□□ -0.24
LMO4-203ENST00000489303 SLC25A45Q8N413 288 aa13.55□□□□□ -0.24
LMO4-203ENST00000489303 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.55□□□□□ -0.24
LMO4-203ENST00000489303 PLD5Q8N7P1 536 aa13.55□□□□□ -0.24
LMO4-203ENST00000489303 OR4C6Q8NH72 309 aa13.55□□□□□ -0.24
LMO4-203ENST00000489303 TPCN2Q8NHX9 752 aa13.55□□□□□ -0.24
LMO4-203ENST00000489303 BAG1Q99933 345 aaPredicted RBP13.55□□□□□ -0.24
LMO4-203ENST00000489303 UCKL1Q9NWZ5 548 aa13.55□□□□□ -0.24
LMO4-203ENST00000489303 NLGN3Q9NZ94 848 aa13.55□□□□□ -0.24
LMO4-203ENST00000489303 B4GALT6Q9UBX8 382 aa13.55□□□□□ -0.24
LMO4-203ENST00000489303 CSNK1G3Q9Y6M4 447 aa13.55□□□□□ -0.24
LMO4-203ENST00000489303 GOLGA4Q13439 2230 aaKnown RBP13.55□□□□□ -0.24
LMO4-203ENST00000489303 C3orf70A6NLC5 250 aaPredicted RBP13.54□□□□□ -0.24
LMO4-203ENST00000489303 CACNB4O00305 520 aaPredicted RBP13.54□□□□□ -0.24
LMO4-203ENST00000489303 SCAMP1O15126 338 aa13.54□□□□□ -0.24
LMO4-203ENST00000489303 AQP9O43315 295 aa13.54□□□□□ -0.24
LMO4-203ENST00000489303 SIGLEC6O43699 453 aa13.54□□□□□ -0.24
LMO4-203ENST00000489303 ZRANB2O95218 330 aaKnown RBP eCLIP13.54□□□□□ -0.24
LMO4-203ENST00000489303 JCHAINP01591 159 aa13.54□□□□□ -0.24
LMO4-203ENST00000489303 FECHP22830 423 aa13.54□□□□□ -0.24
LMO4-203ENST00000489303 KELP23276 732 aa13.54□□□□□ -0.24
LMO4-203ENST00000489303 CDC25BP30305 580 aa13.54□□□□□ -0.24
LMO4-203ENST00000489303 NR2C2P49116 596 aa13.54□□□□□ -0.24
LMO4-203ENST00000489303 DUSP3P51452 185 aaPredicted RBP13.54□□□□□ -0.24
LMO4-203ENST00000489303 DYNLT1P63172 113 aa13.54□□□□□ -0.24
LMO4-203ENST00000489303 SLC10A2Q12908 348 aaPredicted RBP13.54□□□□□ -0.24
LMO4-203ENST00000489303 RALGDSQ12967 914 aa13.54□□□□□ -0.24
LMO4-203ENST00000489303 ILKQ13418 452 aa13.54□□□□□ -0.24
LMO4-203ENST00000489303 SOWAHCQ53LP3 525 aaPredicted RBP13.54□□□□□ -0.24
LMO4-203ENST00000489303 MFSD7Q6UXD7 560 aa13.54□□□□□ -0.24
LMO4-203ENST00000489303 PDZD3Q86UT5 571 aa13.54□□□□□ -0.24
LMO4-203ENST00000489303 CCDC50Q8IVM0 306 aa13.54□□□□□ -0.24
LMO4-203ENST00000489303 PHACTR4Q8IZ21 702 aa13.54□□□□□ -0.24
LMO4-203ENST00000489303 RCOR2Q8IZ40 523 aa13.54□□□□□ -0.24
LMO4-203ENST00000489303 ZNF548Q8NEK5 533 aaPredicted RBP13.54□□□□□ -0.24
LMO4-203ENST00000489303 LMX1AQ8TE12 382 aa13.54□□□□□ -0.24
LMO4-203ENST00000489303 SCRN2Q96FV2 425 aa13.54□□□□□ -0.24
LMO4-203ENST00000489303 RBM41Q96IZ5 413 aaKnown RBP13.54□□□□□ -0.24
LMO4-203ENST00000489303 BBC3Q96PG8 261 aaPredicted RBP13.54□□□□□ -0.24
LMO4-203ENST00000489303 LGMNQ99538 433 aa13.54□□□□□ -0.24
LMO4-203ENST00000489303 IL12RB2Q99665 862 aa13.54□□□□□ -0.24
LMO4-203ENST00000489303 APOOQ9BUR5 198 aa13.54□□□□□ -0.24
LMO4-203ENST00000489303 APOBEC3BQ9UH17 382 aaKnown RBP13.54□□□□□ -0.24
LMO4-203ENST00000489303 DNPEPQ9ULA0 475 aa13.54□□□□□ -0.24
LMO4-203ENST00000489303 COL5A1P20908 1838 aaPredicted RBP13.53□□□□□ -0.24
LMO4-203ENST00000489303 KCNK1O00180 336 aa13.53□□□□□ -0.24
LMO4-203ENST00000489303 PSMD11O00231 422 aa13.53□□□□□ -0.24
LMO4-203ENST00000489303 PDE2AO00408 941 aaPredicted RBP13.53□□□□□ -0.24
LMO4-203ENST00000489303 TRIM38O00635 465 aa13.53□□□□□ -0.24
LMO4-203ENST00000489303 HEXIM1O94992 359 aaKnown RBP13.53□□□□□ -0.24
LMO4-203ENST00000489303 RASGRP1O95267 797 aa13.53□□□□□ -0.24
LMO4-203ENST00000489303 HLA-DQB2P05538 268 aa13.53□□□□□ -0.24
LMO4-203ENST00000489303 CTSEP14091 401 aa13.53□□□□□ -0.24
LMO4-203ENST00000489303 ACADVLP49748 655 aa13.53□□□□□ -0.24
LMO4-203ENST00000489303 IFI35P80217 286 aaPredicted RBP13.53□□□□□ -0.24
LMO4-203ENST00000489303 DSC2Q02487 901 aa13.53□□□□□ -0.24
LMO4-203ENST00000489303 EIF2B5Q13144 721 aaKnown RBP13.53□□□□□ -0.24
LMO4-203ENST00000489303 NFATC4Q14934 902 aa13.53□□□□□ -0.24
LMO4-203ENST00000489303 PROX2Q3B8N5 592 aa13.53□□□□□ -0.24
LMO4-203ENST00000489303 TFDP3Q5H9I0 405 aa13.53□□□□□ -0.24
LMO4-203ENST00000489303 KAZNQ674X7 775 aa13.53□□□□□ -0.24
LMO4-203ENST00000489303 DENND2CQ68D51 928 aa13.53□□□□□ -0.24
LMO4-203ENST00000489303 ALG1LQ6GMV1 187 aa13.53□□□□□ -0.24
LMO4-203ENST00000489303 ENPP7Q6UWV6 458 aa13.53□□□□□ -0.24
LMO4-203ENST00000489303 SPOCD1Q6ZMY3 1216 aa13.53□□□□□ -0.24
LMO4-203ENST00000489303 KIAA1328Q86T90 577 aa13.53□□□□□ -0.24
LMO4-203ENST00000489303 KATNAL2Q8IYT4 538 aa13.53□□□□□ -0.24
LMO4-203ENST00000489303 GLMNQ92990 594 aa13.53□□□□□ -0.24
LMO4-203ENST00000489303 NUS1Q96E22 293 aa13.53□□□□□ -0.24
LMO4-203ENST00000489303 TBATAQ96M53 351 aa13.53□□□□□ -0.24
LMO4-203ENST00000489303 NSMCE3Q96MG7 304 aa13.53□□□□□ -0.24
LMO4-203ENST00000489303 USP29Q9HBJ7 922 aa13.53□□□□□ -0.24
LMO4-203ENST00000489303 NCKIPSDQ9NZQ3 722 aa13.53□□□□□ -0.24
LMO4-203ENST00000489303 SEPT10Q9P0V9 454 aa13.53□□□□□ -0.24
LMO4-203ENST00000489303 KLQ9UEF7 1012 aa13.53□□□□□ -0.24
LMO4-203ENST00000489303 TFR2Q9UP52 801 aa13.53□□□□□ -0.24
LMO4-203ENST00000489303 DOLKQ9UPQ8 538 aa13.53□□□□□ -0.24
LMO4-203ENST00000489303 ATRXP46100 2492 aa13.53□□□□□ -0.24
LMO4-203ENST00000489303 BAHCC1Q9P281 2608 aa13.53□□□□□ -0.24
LMO4-203ENST00000489303 BTNL10A8MVZ5 291 aa13.52□□□□□ -0.25
LMO4-203ENST00000489303 K7ESM1 405 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms