RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 ATP1A2P50993 1020 aa10.04□□□□□ -0.8
USP11-211ENST00000489111 ARSDP51689 593 aa10.04□□□□□ -0.8
USP11-211ENST00000489111 PFKPQ01813 784 aa10.04□□□□□ -0.8
USP11-211ENST00000489111 ACVR1Q04771 509 aa10.04□□□□□ -0.8
USP11-211ENST00000489111 SMAD2Q15796 467 aaKnown RBP10.04□□□□□ -0.8
USP11-211ENST00000489111 PUS10Q3MIT2 529 aaKnown RBP10.04□□□□□ -0.8
USP11-211ENST00000489111 LEXMQ3ZCV2 418 aa10.04□□□□□ -0.8
USP11-211ENST00000489111 ARSIQ5FYB1 569 aa10.04□□□□□ -0.8
USP11-211ENST00000489111 TNFAIP8L3Q5GJ75 292 aa10.04□□□□□ -0.8
USP11-211ENST00000489111 EGFLAMQ63HQ2 1017 aa10.04□□□□□ -0.8
USP11-211ENST00000489111 MRNIPQ6NTE8 343 aa10.04□□□□□ -0.8
USP11-211ENST00000489111 KDM7AQ6ZMT4 941 aa10.04□□□□□ -0.8
USP11-211ENST00000489111 KIAA0408Q6ZU52 694 aa10.04□□□□□ -0.8
USP11-211ENST00000489111 LYSMD3Q7Z3D4 306 aa10.04□□□□□ -0.8
USP11-211ENST00000489111 RALGPS2Q86X27 583 aaPredicted RBP10.04□□□□□ -0.8
USP11-211ENST00000489111 SFTPA1Q8IWL2 248 aa10.04□□□□□ -0.8
USP11-211ENST00000489111 CNTN4Q8IWV2 1026 aa10.04□□□□□ -0.8
USP11-211ENST00000489111 LMNTD2Q8IXW0 634 aa10.04□□□□□ -0.8
USP11-211ENST00000489111 STK40Q8N2I9 435 aa10.04□□□□□ -0.8
USP11-211ENST00000489111 TTC30BQ8N4P2 665 aa10.04□□□□□ -0.8
USP11-211ENST00000489111 MDGA1Q8NFP4 955 aa10.04□□□□□ -0.8
USP11-211ENST00000489111 OR4K2Q8NGD2 314 aa10.04□□□□□ -0.8
USP11-211ENST00000489111 OR13C4Q8NGS5 318 aa10.04□□□□□ -0.8
USP11-211ENST00000489111 SPOCK2Q92563 424 aa10.04□□□□□ -0.8
USP11-211ENST00000489111 ECHDC3Q96DC8 303 aa10.04□□□□□ -0.8
USP11-211ENST00000489111 PPP1R16AQ96I34 528 aa10.04□□□□□ -0.8
USP11-211ENST00000489111 GUCD1Q96NT3 240 aa10.04□□□□□ -0.8
USP11-211ENST00000489111 SMIM14Q96QK8 99 aa10.04□□□□□ -0.8
USP11-211ENST00000489111 AGAP2Q99490 1192 aa10.04□□□□□ -0.8
USP11-211ENST00000489111 RBBP8Q99708 897 aa10.04□□□□□ -0.8
USP11-211ENST00000489111 MFSD1Q9H3U5 465 aa10.04□□□□□ -0.8
USP11-211ENST00000489111 MTG2Q9H4K7 406 aa10.04□□□□□ -0.8
USP11-211ENST00000489111 KCNK9Q9NPC2 374 aa10.04□□□□□ -0.8
USP11-211ENST00000489111 TRPV5Q9NQA5 729 aa10.04□□□□□ -0.8
USP11-211ENST00000489111 CATSPERZQ9NTU4 200 aa10.04□□□□□ -0.8
USP11-211ENST00000489111 NLE1Q9NVX2 485 aaPredicted RBP10.04□□□□□ -0.8
USP11-211ENST00000489111 CACNA2D2Q9NY47 1150 aa10.04□□□□□ -0.8
USP11-211ENST00000489111 NKIRAS1Q9NYS0 192 aa10.04□□□□□ -0.8
USP11-211ENST00000489111 THAP10Q9P2Z0 257 aaPredicted RBP10.04□□□□□ -0.8
USP11-211ENST00000489111 SUN2Q9UH99 717 aa10.04□□□□□ -0.8
USP11-211ENST00000489111 GGT7Q9UJ14 662 aa10.04□□□□□ -0.8
USP11-211ENST00000489111 SMG5Q9UPR3 1016 aaKnown RBP10.04□□□□□ -0.8
USP11-211ENST00000489111 PSAT1Q9Y617 370 aa10.04□□□□□ -0.8
USP11-211ENST00000489111 WASF2Q9Y6W5 498 aa10.04□□□□□ -0.8
USP11-211ENST00000489111 SHROOM3Q8TF72 1996 aa10.03□□□□□ -0.8
USP11-211ENST00000489111 TSPAN11A1L157 253 aa10.03□□□□□ -0.8
USP11-211ENST00000489111 CCDC162PA2VCL2 907 aa10.03□□□□□ -0.8
USP11-211ENST00000489111 FOXO6A8MYZ6 492 aa10.03□□□□□ -0.8
USP11-211ENST00000489111 UPK3BL1B0FP48 263 aa10.03□□□□□ -0.8
USP11-211ENST00000489111 UPK3BL2E5RIL1 263 aa10.03□□□□□ -0.8
USP11-211ENST00000489111 C1QTNF3-AMACRE9PGA6 284 aa10.03□□□□□ -0.8
USP11-211ENST00000489111 AURKAO14965 403 aa10.03□□□□□ -0.8
USP11-211ENST00000489111 PFDN6O15212 129 aa10.03□□□□□ -0.8
USP11-211ENST00000489111 SIN3BO75182 1162 aa10.03□□□□□ -0.8
USP11-211ENST00000489111 GOT2P00505 430 aaKnown RBP10.03□□□□□ -0.8
USP11-211ENST00000489111 ITGA2BP08514 1039 aa10.03□□□□□ -0.8
USP11-211ENST00000489111 CYP2A6P11509 494 aaPredicted RBP10.03□□□□□ -0.8
USP11-211ENST00000489111 KRT4P19013 534 aa10.03□□□□□ -0.8
USP11-211ENST00000489111 PMLP29590 882 aa10.03□□□□□ -0.8
USP11-211ENST00000489111 IL12RB1P42701 662 aa10.03□□□□□ -0.8
USP11-211ENST00000489111 SLC1A2P43004 574 aa10.03□□□□□ -0.8
USP11-211ENST00000489111 CD151P48509 253 aa10.03□□□□□ -0.8
USP11-211ENST00000489111 SERPINB8P50452 374 aa10.03□□□□□ -0.8
USP11-211ENST00000489111 GALK1P51570 392 aa10.03□□□□□ -0.8
USP11-211ENST00000489111 LIMK2P53671 638 aa10.03□□□□□ -0.8
USP11-211ENST00000489111 SEC13P55735 322 aa10.03□□□□□ -0.8
USP11-211ENST00000489111 CBX1P83916 185 aa10.03□□□□□ -0.8
USP11-211ENST00000489111 GRSF1Q12849 480 aaKnown RBP eCLIP10.03□□□□□ -0.8
USP11-211ENST00000489111 ILF2Q12905 390 aaKnown RBP10.03□□□□□ -0.8
USP11-211ENST00000489111 DNAJC3Q13217 504 aa10.03□□□□□ -0.8
USP11-211ENST00000489111 FASTKD1Q53R41 847 aaKnown RBP10.03□□□□□ -0.8
USP11-211ENST00000489111 ZNF805Q5CZA5 627 aa10.03□□□□□ -0.8
USP11-211ENST00000489111 MROH9Q5TGP6 573 aa10.03□□□□□ -0.8
USP11-211ENST00000489111 PTCRAQ6ISU1 281 aaPredicted RBP10.03□□□□□ -0.8
USP11-211ENST00000489111 ERAP2Q6P179 960 aa10.03□□□□□ -0.8
USP11-211ENST00000489111 TPRG1Q6ZUI0 275 aa10.03□□□□□ -0.8
USP11-211ENST00000489111 PTAR1Q7Z6K3 402 aaPredicted RBP10.03□□□□□ -0.8
USP11-211ENST00000489111 SDCCAG8Q86SQ7 713 aaPredicted RBP10.03□□□□□ -0.8
USP11-211ENST00000489111 EXOC3L1Q86VI1 746 aa10.03□□□□□ -0.8
USP11-211ENST00000489111 ZSWIM9Q86XI8 627 aa10.03□□□□□ -0.8
USP11-211ENST00000489111 DENND6AQ8IWF6 608 aa10.03□□□□□ -0.8
USP11-211ENST00000489111 CHPFQ8IZ52 775 aa10.03□□□□□ -0.8
USP11-211ENST00000489111 C4orf33Q8N1A6 199 aa10.03□□□□□ -0.8
USP11-211ENST00000489111 SLC44A3Q8N4M1 653 aa10.03□□□□□ -0.8
USP11-211ENST00000489111 ZNF513Q8N8E2 541 aaPredicted RBP10.03□□□□□ -0.8
USP11-211ENST00000489111 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.03□□□□□ -0.8
USP11-211ENST00000489111 PBXIP1Q96AQ6 731 aa10.03□□□□□ -0.8
USP11-211ENST00000489111 ALKBH8Q96BT7 664 aaKnown RBP10.03□□□□□ -0.8
USP11-211ENST00000489111 ATXN7L3BQ96GX2 97 aa10.03□□□□□ -0.8
USP11-211ENST00000489111 TBATAQ96M53 351 aa10.03□□□□□ -0.8
USP11-211ENST00000489111 MCCC1Q96RQ3 725 aaPredicted RBP10.03□□□□□ -0.8
USP11-211ENST00000489111 IQCGQ9H095 443 aaKnown RBP10.03□□□□□ -0.8
USP11-211ENST00000489111 TMEM245Q9H330 911 aa10.03□□□□□ -0.8
USP11-211ENST00000489111 RHOJQ9H4E5 214 aa10.03□□□□□ -0.8
USP11-211ENST00000489111 ZFYVE1Q9HBF4 777 aa10.03□□□□□ -0.8
USP11-211ENST00000489111 DYRK4Q9NR20 520 aa10.03□□□□□ -0.8
USP11-211ENST00000489111 DKK3Q9UBP4 350 aa10.03□□□□□ -0.8
USP11-211ENST00000489111 FBXO5Q9UKT4 447 aa10.03□□□□□ -0.8
USP11-211ENST00000489111 FNDC3AQ9Y2H6 1198 aaKnown RBP10.03□□□□□ -0.8
USP11-211ENST00000489111 COL4A3Q01955 1670 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms