RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 CTPS1P17812 591 aa9.15□□□□□ -0.94
HDAC6-232ENST00000489053 IL4RP24394 825 aa9.15□□□□□ -0.94
HDAC6-232ENST00000489053 ACP1P24666 158 aa9.15□□□□□ -0.94
HDAC6-232ENST00000489053 CTNNA2P26232 953 aa9.15□□□□□ -0.94
HDAC6-232ENST00000489053 PPM1FP49593 454 aaPredicted RBP9.15□□□□□ -0.94
HDAC6-232ENST00000489053 GBE1Q04446 702 aa9.15□□□□□ -0.94
HDAC6-232ENST00000489053 TRAF2Q12933 501 aa9.15□□□□□ -0.94
HDAC6-232ENST00000489053 C1orf61Q13536 156 aa9.15□□□□□ -0.94
HDAC6-232ENST00000489053 PEX6Q13608 980 aa9.15□□□□□ -0.94
HDAC6-232ENST00000489053 CDKN3Q16667 212 aa9.15□□□□□ -0.94
HDAC6-232ENST00000489053 WSCD2Q2TBF2 565 aa9.15□□□□□ -0.94
HDAC6-232ENST00000489053 LRRC38Q5VT99 294 aa9.15□□□□□ -0.94
HDAC6-232ENST00000489053 KAZNQ674X7 775 aa9.15□□□□□ -0.94
HDAC6-232ENST00000489053 RAET1GQ6H3X3 334 aa9.15□□□□□ -0.94
HDAC6-232ENST00000489053 LIPIQ6XZB0 460 aa9.15□□□□□ -0.94
HDAC6-232ENST00000489053 EFL1Q7Z2Z2 1120 aaKnown RBP9.15□□□□□ -0.94
HDAC6-232ENST00000489053 TAF8Q7Z7C8 310 aa9.15□□□□□ -0.94
HDAC6-232ENST00000489053 DAAM2Q86T65 1068 aa9.15□□□□□ -0.94
HDAC6-232ENST00000489053 KIAA1328Q86T90 577 aa9.15□□□□□ -0.94
HDAC6-232ENST00000489053 ZSWIM9Q86XI8 627 aa9.15□□□□□ -0.94
HDAC6-232ENST00000489053 TMTC1Q8IUR5 882 aa9.15□□□□□ -0.94
HDAC6-232ENST00000489053 RBFAQ8N0V3 343 aa9.15□□□□□ -0.94
HDAC6-232ENST00000489053 KDF1Q8NAX2 398 aaPredicted RBP9.15□□□□□ -0.94
HDAC6-232ENST00000489053 TPCN2Q8NHX9 752 aa9.15□□□□□ -0.94
HDAC6-232ENST00000489053 FAM71BQ8TC56 605 aa9.15□□□□□ -0.94
HDAC6-232ENST00000489053 IFI44Q8TCB0 444 aa9.15□□□□□ -0.94
HDAC6-232ENST00000489053 CCHCR1Q8TD31 782 aa9.15□□□□□ -0.94
HDAC6-232ENST00000489053 RAPGEF5Q92565 580 aa9.15□□□□□ -0.94
HDAC6-232ENST00000489053 NAT6Q93015 286 aa9.15□□□□□ -0.94
HDAC6-232ENST00000489053 TSACCQ96A04 125 aaPredicted RBP9.15□□□□□ -0.94
HDAC6-232ENST00000489053 RNF25Q96BH1 459 aaPredicted RBP9.15□□□□□ -0.94
HDAC6-232ENST00000489053 ECHDC3Q96DC8 303 aa9.15□□□□□ -0.94
HDAC6-232ENST00000489053 MRFAP1L1Q96HT8 127 aa9.15□□□□□ -0.94
HDAC6-232ENST00000489053 CALR3Q96L12 384 aaKnown RBP9.15□□□□□ -0.94
HDAC6-232ENST00000489053 RNF157Q96PX1 679 aa9.15□□□□□ -0.94
HDAC6-232ENST00000489053 DEPDC7Q96QD5 511 aa9.15□□□□□ -0.94
HDAC6-232ENST00000489053 BRD8Q9H0E9 1235 aa9.15□□□□□ -0.94
HDAC6-232ENST00000489053 GULP1Q9UBP9 304 aa9.15□□□□□ -0.94
HDAC6-232ENST00000489053 NENFQ9UMX5 172 aa9.15□□□□□ -0.94
HDAC6-232ENST00000489053 ASPMQ8IZT6 3477 aa9.14□□□□□ -0.95
HDAC6-232ENST00000489053 MACROD2A1Z1Q3 448 aa9.14□□□□□ -0.95
HDAC6-232ENST00000489053 TRABD2BA6NFA1 517 aa9.14□□□□□ -0.95
HDAC6-232ENST00000489053 ZNF487B1APH4 448 aa9.14□□□□□ -0.95
HDAC6-232ENST00000489053 KCNK1O00180 336 aa9.14□□□□□ -0.95
HDAC6-232ENST00000489053 PSMD11O00231 422 aa9.14□□□□□ -0.95
HDAC6-232ENST00000489053 TRAFD1O14545 582 aaPredicted RBP9.14□□□□□ -0.95
HDAC6-232ENST00000489053 ZW10O43264 779 aa9.14□□□□□ -0.95
HDAC6-232ENST00000489053 HTRA2O43464 458 aaPredicted RBP9.14□□□□□ -0.95
HDAC6-232ENST00000489053 PSTPIP1O43586 416 aa9.14□□□□□ -0.95
HDAC6-232ENST00000489053 HEXIM1O94992 359 aaKnown RBP9.14□□□□□ -0.95
HDAC6-232ENST00000489053 PEX11BO96011 259 aa9.14□□□□□ -0.95
HDAC6-232ENST00000489053 PYGLP06737 847 aa9.14□□□□□ -0.95
HDAC6-232ENST00000489053 GP1BAP07359 652 aa9.14□□□□□ -0.95
HDAC6-232ENST00000489053 TSHRP16473 764 aa9.14□□□□□ -0.95
HDAC6-232ENST00000489053 COMTP21964 271 aa9.14□□□□□ -0.95
HDAC6-232ENST00000489053 ETV3P41162 512 aa9.14□□□□□ -0.95
HDAC6-232ENST00000489053 CD86P42081 329 aa9.14□□□□□ -0.95
HDAC6-232ENST00000489053 GPR1P46091 355 aa9.14□□□□□ -0.95
HDAC6-232ENST00000489053 NR2C2P49116 596 aa9.14□□□□□ -0.95
HDAC6-232ENST00000489053 ARSEP51690 589 aa9.14□□□□□ -0.95
HDAC6-232ENST00000489053 HK3P52790 923 aa9.14□□□□□ -0.95
HDAC6-232ENST00000489053 KIAA1024LP59773 190 aa9.14□□□□□ -0.95
HDAC6-232ENST00000489053 ILF3Q12906 894 aaKnown RBP eCLIP9.14□□□□□ -0.95
HDAC6-232ENST00000489053 EIF2B5Q13144 721 aaKnown RBP9.14□□□□□ -0.95
HDAC6-232ENST00000489053 TARDBPQ13148 414 aaKnown RBP eCLIP9.14□□□□□ -0.95
HDAC6-232ENST00000489053 TBX2Q13207 712 aaPredicted RBP9.14□□□□□ -0.95
HDAC6-232ENST00000489053 CNGA3Q16281 694 aa9.14□□□□□ -0.95
HDAC6-232ENST00000489053 KDM7AQ6ZMT4 941 aa9.14□□□□□ -0.95
HDAC6-232ENST00000489053 VSIG1Q86XK7 387 aa9.14□□□□□ -0.95
HDAC6-232ENST00000489053 CPNE8Q86YQ8 564 aa9.14□□□□□ -0.95
HDAC6-232ENST00000489053 SDR16C5Q8N3Y7 309 aa9.14□□□□□ -0.95
HDAC6-232ENST00000489053 PGBD5Q8N414 524 aa9.14□□□□□ -0.95
HDAC6-232ENST00000489053 FAM181AQ8N9Y4 354 aa9.14□□□□□ -0.95
HDAC6-232ENST00000489053 LPCAT1Q8NF37 534 aa9.14□□□□□ -0.95
HDAC6-232ENST00000489053 OR56A4Q8NGH8 313 aa9.14□□□□□ -0.95
HDAC6-232ENST00000489053 FATE1Q969F0 183 aa9.14□□□□□ -0.95
HDAC6-232ENST00000489053 FAF2Q96CS3 445 aa9.14□□□□□ -0.95
HDAC6-232ENST00000489053 HDAC11Q96DB2 347 aa9.14□□□□□ -0.95
HDAC6-232ENST00000489053 RBM41Q96IZ5 413 aaKnown RBP9.14□□□□□ -0.95
HDAC6-232ENST00000489053 TBATAQ96M53 351 aa9.14□□□□□ -0.95
HDAC6-232ENST00000489053 TSGA13Q96PP4 275 aa9.14□□□□□ -0.95
HDAC6-232ENST00000489053 PANX2Q96RD6 677 aa9.14□□□□□ -0.95
HDAC6-232ENST00000489053 LRRC61Q9BV99 259 aa9.14□□□□□ -0.95
HDAC6-232ENST00000489053 ZMYND15Q9H091 742 aa9.14□□□□□ -0.95
HDAC6-232ENST00000489053 PCDH9Q9HC56 1237 aa9.14□□□□□ -0.95
HDAC6-232ENST00000489053 GPR27Q9NS67 375 aa9.14□□□□□ -0.95
HDAC6-232ENST00000489053 DTLQ9NZJ0 730 aa9.14□□□□□ -0.95
HDAC6-232ENST00000489053 SIRPGQ9P1W8 387 aa9.14□□□□□ -0.95
HDAC6-232ENST00000489053 SALL4Q9UJQ4 1053 aa9.14□□□□□ -0.95
HDAC6-232ENST00000489053 GPR34Q9UPC5 381 aa9.14□□□□□ -0.95
HDAC6-232ENST00000489053 PCDHA13Q9Y5I0 950 aa9.14□□□□□ -0.95
HDAC6-232ENST00000489053 PKD1L2Q7Z442 2459 aa9.13□□□□□ -0.95
HDAC6-232ENST00000489053 DMXL2Q8TDJ6 3036 aa9.13□□□□□ -0.95
HDAC6-232ENST00000489053 NPIPB15A6NHN6 443 aaPredicted RBP9.13□□□□□ -0.95
HDAC6-232ENST00000489053 MTSS1O43312 755 aa9.13□□□□□ -0.95
HDAC6-232ENST00000489053 OPA1O60313 960 aa9.13□□□□□ -0.95
HDAC6-232ENST00000489053 STK10O94804 968 aaKnown RBP9.13□□□□□ -0.95
HDAC6-232ENST00000489053 DKK1O94907 266 aa9.13□□□□□ -0.95
HDAC6-232ENST00000489053 ZRANB2O95218 330 aaKnown RBP eCLIP9.13□□□□□ -0.95
HDAC6-232ENST00000489053 MT-CO3P00414 261 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms