RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 CNGA3Q16281 694 aa12.35□□□□□ -0.43
TRAIP-209ENST00000488860 CCDC38Q502W7 563 aa12.35□□□□□ -0.43
TRAIP-209ENST00000488860 DNAJC21Q5F1R6 531 aaKnown RBP12.35□□□□□ -0.43
TRAIP-209ENST00000488860 HP1BP3Q5SSJ5 553 aaPredicted RBP12.35□□□□□ -0.43
TRAIP-209ENST00000488860 FNBP1LQ5T0N5 605 aa12.35□□□□□ -0.43
TRAIP-209ENST00000488860 LRRC66Q68CR7 880 aa12.35□□□□□ -0.43
TRAIP-209ENST00000488860 PDIK1LQ8N165 341 aa12.35□□□□□ -0.43
TRAIP-209ENST00000488860 MPP5Q8N3R9 675 aa12.35□□□□□ -0.43
TRAIP-209ENST00000488860 ZCCHC9Q8N567 271 aaKnown RBP12.35□□□□□ -0.43
TRAIP-209ENST00000488860 FAM160A2Q8N612 972 aaPredicted RBP12.35□□□□□ -0.43
TRAIP-209ENST00000488860 SCRN2Q96FV2 425 aa12.35□□□□□ -0.43
TRAIP-209ENST00000488860 SPACA7Q96KW9 195 aa12.35□□□□□ -0.43
TRAIP-209ENST00000488860 MCCC1Q96RQ3 725 aaPredicted RBP12.35□□□□□ -0.43
TRAIP-209ENST00000488860 BTBD1Q9H0C5 482 aa12.35□□□□□ -0.43
TRAIP-209ENST00000488860 ARNT2Q9HBZ2 717 aa12.35□□□□□ -0.43
TRAIP-209ENST00000488860 C11orf16Q9NQ32 467 aa12.35□□□□□ -0.43
TRAIP-209ENST00000488860 ITM2CQ9NQX7 267 aa12.35□□□□□ -0.43
TRAIP-209ENST00000488860 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.35□□□□□ -0.43
TRAIP-209ENST00000488860 BFARQ9NZS9 450 aa12.35□□□□□ -0.43
TRAIP-209ENST00000488860 SAMD15Q9P1V8 674 aa12.35□□□□□ -0.43
TRAIP-209ENST00000488860 NFU1Q9UMS0 254 aa12.35□□□□□ -0.43
TRAIP-209ENST00000488860 FNDC3AQ9Y2H6 1198 aaKnown RBP12.35□□□□□ -0.43
TRAIP-209ENST00000488860 ARL5AQ9Y689 179 aa12.35□□□□□ -0.43
TRAIP-209ENST00000488860 MAD1L1Q9Y6D9 718 aa12.35□□□□□ -0.43
TRAIP-209ENST00000488860 ZDBF2Q9HCK1 2354 aa12.35□□□□□ -0.43
TRAIP-209ENST00000488860 PLXNB3Q9ULL4 1909 aa12.35□□□□□ -0.43
TRAIP-209ENST00000488860 TBC1D3DA0A087WVF3 549 aa12.34□□□□□ -0.43
TRAIP-209ENST00000488860 TBC1D3IA0A087WXS9 549 aa12.34□□□□□ -0.43
TRAIP-209ENST00000488860 TBC1D3EA0A087X179 549 aa12.34□□□□□ -0.43
TRAIP-209ENST00000488860 TBC1D3KA0A087X1G2 549 aa12.34□□□□□ -0.43
TRAIP-209ENST00000488860 IGHV1OR15-9A0A0B4J2B8 117 aa12.34□□□□□ -0.43
TRAIP-209ENST00000488860 TBC1D3FA6NER0 549 aaPredicted RBP12.34□□□□□ -0.43
TRAIP-209ENST00000488860 TBC1D3LB9A6J9 549 aa12.34□□□□□ -0.43
TRAIP-209ENST00000488860 AURKAO14965 403 aa12.34□□□□□ -0.43
TRAIP-209ENST00000488860 TP73O15350 636 aa12.34□□□□□ -0.43
TRAIP-209ENST00000488860 AP1G1O43747 822 aa12.34□□□□□ -0.43
TRAIP-209ENST00000488860 RNGTTO60942 597 aaKnown RBP12.34□□□□□ -0.43
TRAIP-209ENST00000488860 PPFIA2O75334 1257 aa12.34□□□□□ -0.43
TRAIP-209ENST00000488860 CLDN7O95471 211 aa12.34□□□□□ -0.43
TRAIP-209ENST00000488860 CRTAMO95727 393 aa12.34□□□□□ -0.43
TRAIP-209ENST00000488860 SEMA4FO95754 770 aa12.34□□□□□ -0.43
TRAIP-209ENST00000488860 TBC1D3HP0C7X1 549 aa12.34□□□□□ -0.43
TRAIP-209ENST00000488860 CD6P30203 668 aa12.34□□□□□ -0.43
TRAIP-209ENST00000488860 ACSL1P33121 698 aa12.34□□□□□ -0.43
TRAIP-209ENST00000488860 NPY2RP49146 381 aa12.34□□□□□ -0.43
TRAIP-209ENST00000488860 SUOXP51687 545 aa12.34□□□□□ -0.43
TRAIP-209ENST00000488860 PDIA2Q13087 525 aaKnown RBP12.34□□□□□ -0.43
TRAIP-209ENST00000488860 MSS51Q4VC12 460 aa12.34□□□□□ -0.43
TRAIP-209ENST00000488860 TBC1D3GQ6DHY5 549 aa12.34□□□□□ -0.43
TRAIP-209ENST00000488860 TBC1D3CQ6IPX1 549 aa12.34□□□□□ -0.43
TRAIP-209ENST00000488860 CRTC1Q6UUV9 634 aa12.34□□□□□ -0.43
TRAIP-209ENST00000488860 CENPUQ71F23 418 aa12.34□□□□□ -0.43
TRAIP-209ENST00000488860 ANKMY2Q8IV38 441 aa12.34□□□□□ -0.43
TRAIP-209ENST00000488860 TBC1D3Q8IZP1 549 aaPredicted RBP12.34□□□□□ -0.43
TRAIP-209ENST00000488860 FRMD1Q8N878 549 aa12.34□□□□□ -0.43
TRAIP-209ENST00000488860 SPOCK2Q92563 424 aa12.34□□□□□ -0.43
TRAIP-209ENST00000488860 RUBCNQ92622 972 aa12.34□□□□□ -0.43
TRAIP-209ENST00000488860 TOE1Q96GM8 510 aaKnown RBP12.34□□□□□ -0.43
TRAIP-209ENST00000488860 FMO2Q99518 471 aa12.34□□□□□ -0.43
TRAIP-209ENST00000488860 FRMD8Q9BZ67 464 aaPredicted RBP12.34□□□□□ -0.43
TRAIP-209ENST00000488860 FAM129AQ9BZQ8 928 aa12.34□□□□□ -0.43
TRAIP-209ENST00000488860 IL22Q9GZX6 179 aa12.34□□□□□ -0.43
TRAIP-209ENST00000488860 SGK2Q9HBY8 427 aa12.34□□□□□ -0.43
TRAIP-209ENST00000488860 MAGEE1Q9HCI5 957 aa12.34□□□□□ -0.43
TRAIP-209ENST00000488860 SAYSD1Q9NPB0 183 aa12.34□□□□□ -0.43
TRAIP-209ENST00000488860 ZDHHC18Q9NUE0 388 aa12.34□□□□□ -0.43
TRAIP-209ENST00000488860 HACD3Q9P035 362 aa12.34□□□□□ -0.43
TRAIP-209ENST00000488860 CHMP2BQ9UQN3 213 aa12.34□□□□□ -0.43
TRAIP-209ENST00000488860 COQ6Q9Y2Z9 468 aa12.34□□□□□ -0.43
TRAIP-209ENST00000488860 PPIL1Q9Y3C6 166 aa12.34□□□□□ -0.43
TRAIP-209ENST00000488860 TNRC6BQ9UPQ9 1833 aaKnown RBP12.33□□□□□ -0.44
TRAIP-209ENST00000488860 HEATR9A2RTY3 570 aa12.33□□□□□ -0.44
TRAIP-209ENST00000488860 LRRC72A6NJI9 287 aa12.33□□□□□ -0.44
TRAIP-209ENST00000488860 PRR33A8MZF0 331 aa12.33□□□□□ -0.44
TRAIP-209ENST00000488860 AREL1O15033 823 aa12.33□□□□□ -0.44
TRAIP-209ENST00000488860 TSPAN6O43657 245 aa12.33□□□□□ -0.44
TRAIP-209ENST00000488860 LZTS3O60299 673 aaPredicted RBP12.33□□□□□ -0.44
TRAIP-209ENST00000488860 MMP20O60882 483 aa12.33□□□□□ -0.44
TRAIP-209ENST00000488860 NDUFS2O75306 463 aa12.33□□□□□ -0.44
TRAIP-209ENST00000488860 IGLV3-19P01714 112 aa12.33□□□□□ -0.44
TRAIP-209ENST00000488860 C1SP09871 688 aa12.33□□□□□ -0.44
TRAIP-209ENST00000488860 C6P13671 934 aa12.33□□□□□ -0.44
TRAIP-209ENST00000488860 ZNF30P17039 623 aa12.33□□□□□ -0.44
TRAIP-209ENST00000488860 ECHS1P30084 290 aa12.33□□□□□ -0.44
TRAIP-209ENST00000488860 OXTRP30559 389 aa12.33□□□□□ -0.44
TRAIP-209ENST00000488860 MAT2AP31153 395 aaKnown RBP12.33□□□□□ -0.44
TRAIP-209ENST00000488860 LIG3P49916 1009 aa12.33□□□□□ -0.44
TRAIP-209ENST00000488860 PPP2CBP62714 309 aa12.33□□□□□ -0.44
TRAIP-209ENST00000488860 VSNL1P62760 191 aa12.33□□□□□ -0.44
TRAIP-209ENST00000488860 PPP2CAP67775 309 aa12.33□□□□□ -0.44
TRAIP-209ENST00000488860 TMPRSS15P98073 1019 aa12.33□□□□□ -0.44
TRAIP-209ENST00000488860 ACOX1Q15067 660 aa12.33□□□□□ -0.44
TRAIP-209ENST00000488860 TAF1AQ15573 450 aaPredicted RBP12.33□□□□□ -0.44
TRAIP-209ENST00000488860 TMEM52BQ4KMG9 183 aa12.33□□□□□ -0.44
TRAIP-209ENST00000488860 USP39Q53GS9 565 aaKnown RBP12.33□□□□□ -0.44
TRAIP-209ENST00000488860 SEL1L3Q68CR1 1132 aa12.33□□□□□ -0.44
TRAIP-209ENST00000488860 MAMSTRQ6ZN01 415 aa12.33□□□□□ -0.44
TRAIP-209ENST00000488860 WDR5BQ86VZ2 330 aa12.33□□□□□ -0.44
TRAIP-209ENST00000488860 MAML2Q8IZL2 1156 aaPredicted RBP12.33□□□□□ -0.44
TRAIP-209ENST00000488860 TTC30BQ8N4P2 665 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms