RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 MMP13P45452 471 aa19.38■□□□□ 0.69
CD55-209ENST00000488171 LSSP48449 732 aa19.38■□□□□ 0.69
CD55-209ENST00000488171 TRAF2Q12933 501 aa19.38■□□□□ 0.69
CD55-209ENST00000488171 ACOX1Q15067 660 aa19.38■□□□□ 0.69
CD55-209ENST00000488171 CNGA3Q16281 694 aa19.38■□□□□ 0.69
CD55-209ENST00000488171 ATP13A4Q4VNC1 1196 aa19.38■□□□□ 0.69
CD55-209ENST00000488171 SOWAHCQ53LP3 525 aaPredicted RBP19.38■□□□□ 0.69
CD55-209ENST00000488171 SDR16C5Q8N3Y7 309 aa19.38■□□□□ 0.69
CD55-209ENST00000488171 ARL10Q8N8L6 244 aa19.38■□□□□ 0.69
CD55-209ENST00000488171 KYQ8NBH2 561 aa19.38■□□□□ 0.69
CD55-209ENST00000488171 PDCD6IPQ8WUM4 868 aaKnown RBP19.38■□□□□ 0.69
CD55-209ENST00000488171 RBM15Q96T37 977 aaKnown RBP eCLIP19.38■□□□□ 0.691e-6■■■□□ 15.5
CD55-209ENST00000488171 CCDC3Q9BQI4 270 aa19.38■□□□□ 0.69
CD55-209ENST00000488171 FGF22Q9HCT0 170 aa19.38■□□□□ 0.69
CD55-209ENST00000488171 ENTPD2Q9Y5L3 495 aa19.38■□□□□ 0.69
CD55-209ENST00000488171 SHROOM3Q8TF72 1996 aa19.38■□□□□ 0.69
CD55-209ENST00000488171 A0A1W2PQ67 120 aa19.37■□□□□ 0.69
CD55-209ENST00000488171 CACNB4O00305 520 aaPredicted RBP19.37■□□□□ 0.69
CD55-209ENST00000488171 MFSD11O43934 449 aa19.37■□□□□ 0.69
CD55-209ENST00000488171 TCEA3O75764 348 aa19.37■□□□□ 0.69
CD55-209ENST00000488171 CPP00450 1065 aa19.37■□□□□ 0.69
CD55-209ENST00000488171 TNFP01375 233 aa19.37■□□□□ 0.69
CD55-209ENST00000488171 HOXC4P09017 264 aaPredicted RBP19.37■□□□□ 0.69
CD55-209ENST00000488171 SSR1P43307 286 aaKnown RBP19.37■□□□□ 0.69
CD55-209ENST00000488171 DPYSL3Q14195 570 aa19.37■□□□□ 0.69
CD55-209ENST00000488171 HADHQ16836 314 aaKnown RBP19.37■□□□□ 0.69
CD55-209ENST00000488171 MARC1Q5VT66 337 aa19.37■□□□□ 0.69
CD55-209ENST00000488171 PNCKQ6P2M8 343 aa19.37■□□□□ 0.69
CD55-209ENST00000488171 LRRC69Q6ZNQ3 347 aa19.37■□□□□ 0.69
CD55-209ENST00000488171 RBM44Q6ZP01 1051 aaKnown RBP19.37■□□□□ 0.69
CD55-209ENST00000488171 GKN2Q86XP6 184 aa19.37■□□□□ 0.69
CD55-209ENST00000488171 CBARPQ8N350 705 aaPredicted RBP19.37■□□□□ 0.69
CD55-209ENST00000488171 BBS5Q8N3I7 341 aa19.37■□□□□ 0.69
CD55-209ENST00000488171 TEX26Q8N6G2 289 aa19.37■□□□□ 0.69
CD55-209ENST00000488171 OR56A4Q8NGH8 313 aa19.37■□□□□ 0.69
CD55-209ENST00000488171 SCG3Q8WXD2 468 aaKnown RBP19.37■□□□□ 0.69
CD55-209ENST00000488171 ATXN7L3BQ96GX2 97 aa19.37■□□□□ 0.69
CD55-209ENST00000488171 LGR4Q9BXB1 951 aa19.37■□□□□ 0.69
CD55-209ENST00000488171 POLR1BQ9H9Y6 1135 aa19.37■□□□□ 0.69
CD55-209ENST00000488171 MRPL40Q9NQ50 206 aaKnown RBP19.37■□□□□ 0.69
CD55-209ENST00000488171 SIRPGQ9P1W8 387 aa19.37■□□□□ 0.69
CD55-209ENST00000488171 GULP1Q9UBP9 304 aa19.37■□□□□ 0.69
CD55-209ENST00000488171 GPR34Q9UPC5 381 aa19.37■□□□□ 0.69
CD55-209ENST00000488171 RP1P56715 2156 aa19.36■□□□□ 0.69
CD55-209ENST00000488171 HEXIM1O94992 359 aaKnown RBP19.36■□□□□ 0.69
CD55-209ENST00000488171 LHCGRP22888 699 aa19.36■□□□□ 0.69
CD55-209ENST00000488171 VIPR1P32241 457 aa19.36■□□□□ 0.69
CD55-209ENST00000488171 PDX1P52945 283 aa19.36■□□□□ 0.69
CD55-209ENST00000488171 PTPRRQ15256 657 aa19.36■□□□□ 0.69
CD55-209ENST00000488171 RALGPS1Q5JS13 557 aa19.36■□□□□ 0.69
CD55-209ENST00000488171 NCBP2-AS2Q69YL0 99 aa19.36■□□□□ 0.69
CD55-209ENST00000488171 LRRC49Q8IUZ0 686 aa19.36■□□□□ 0.69
CD55-209ENST00000488171 NSMCE1Q8WV22 266 aa19.36■□□□□ 0.69
CD55-209ENST00000488171 NUS1Q96E22 293 aa19.36■□□□□ 0.69
CD55-209ENST00000488171 HIC2Q96JB3 615 aa19.36■□□□□ 0.69
CD55-209ENST00000488171 ZNF578Q96N58 590 aaPredicted RBP19.36■□□□□ 0.69
CD55-209ENST00000488171 PACSIN1Q9BY11 444 aa19.36■□□□□ 0.69
CD55-209ENST00000488171 RABGEF1Q9UJ41 708 aa19.36■□□□□ 0.69
CD55-209ENST00000488171 PHTF1Q9UMS5 762 aa19.36■□□□□ 0.69
CD55-209ENST00000488171 SATB2Q9UPW6 733 aa19.36■□□□□ 0.69
CD55-209ENST00000488171 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.36■□□□□ 0.69
CD55-209ENST00000488171 RAI2Q9Y5P3 530 aa19.36■□□□□ 0.69
CD55-209ENST00000488171 NPIPB15A6NHN6 443 aaPredicted RBP19.35■□□□□ 0.69
CD55-209ENST00000488171 NTN3O00634 580 aaPredicted RBP19.35■□□□□ 0.69
CD55-209ENST00000488171 TNFRSF10CO14798 259 aa19.35■□□□□ 0.69
CD55-209ENST00000488171 PROSCO94903 275 aa19.35■□□□□ 0.69
CD55-209ENST00000488171 PGLSO95336 258 aa19.35■□□□□ 0.69
CD55-209ENST00000488171 GJC1P36383 396 aa19.35■□□□□ 0.69
CD55-209ENST00000488171 GARSP41250 739 aaKnown RBP19.35■□□□□ 0.69
CD55-209ENST00000488171 TAS2R40P59535 323 aa19.35■□□□□ 0.69
CD55-209ENST00000488171 CCDC173Q0VFZ6 552 aa19.35■□□□□ 0.69
CD55-209ENST00000488171 GALNT2Q10471 571 aa19.35■□□□□ 0.69
CD55-209ENST00000488171 PAFAH1B3Q15102 231 aaKnown RBP19.35■□□□□ 0.69
CD55-209ENST00000488171 ASTE1Q2TB18 679 aaPredicted RBP19.35■□□□□ 0.69
CD55-209ENST00000488171 HSD11B1LQ7Z5J1 315 aa19.35■□□□□ 0.69
CD55-209ENST00000488171 LSMEM2Q8N112 164 aa19.35■□□□□ 0.69
CD55-209ENST00000488171 CCDC74AQ96AQ1 378 aa19.35■□□□□ 0.69
CD55-209ENST00000488171 GRAMD1AQ96CP6 724 aa19.35■□□□□ 0.69
CD55-209ENST00000488171 BBC3Q96PG8 261 aaPredicted RBP19.35■□□□□ 0.69
CD55-209ENST00000488171 PRORYQ9H606 182 aa19.35■□□□□ 0.69
CD55-209ENST00000488171 WDR26Q9H7D7 661 aa19.35■□□□□ 0.69
CD55-209ENST00000488171 NT5MQ9NPB1 228 aa19.35■□□□□ 0.69
CD55-209ENST00000488171 ASCL3Q9NQ33 180 aa19.35■□□□□ 0.69
CD55-209ENST00000488171 CTTNBP2NLQ9P2B4 639 aa19.35■□□□□ 0.69
CD55-209ENST00000488171 UVRAGQ9P2Y5 699 aa19.35■□□□□ 0.69
CD55-209ENST00000488171 KELP23276 732 aa19.34■□□□□ 0.69
CD55-209ENST00000488171 ETV3P41162 512 aa19.34■□□□□ 0.69
CD55-209ENST00000488171 ERVPABLB-1P60509 514 aa19.34■□□□□ 0.69
CD55-209ENST00000488171 SLC18A3Q16572 532 aa19.34■□□□□ 0.69
CD55-209ENST00000488171 ANKRD20A8PQ5CZ79 823 aa19.34■□□□□ 0.69
CD55-209ENST00000488171 C3orf38Q5JPI3 329 aa19.34■□□□□ 0.69
CD55-209ENST00000488171 TSPAN33Q86UF1 283 aa19.34■□□□□ 0.69
CD55-209ENST00000488171 SPACA3Q8IXA5 215 aa19.34■□□□□ 0.69
CD55-209ENST00000488171 GPR156Q8NFN8 814 aa19.34■□□□□ 0.69
CD55-209ENST00000488171 WDR48Q8TAF3 677 aa19.34■□□□□ 0.69
CD55-209ENST00000488171 PIH1D2Q8WWB5 315 aa19.34■□□□□ 0.69
CD55-209ENST00000488171 MAML1Q92585 1016 aa19.34■□□□□ 0.69
CD55-209ENST00000488171 DTD2Q96FN9 168 aa19.34■□□□□ 0.69
CD55-209ENST00000488171 SCRN2Q96FV2 425 aa19.34■□□□□ 0.69
CD55-209ENST00000488171 PRR11Q96HE9 360 aaPredicted RBP19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms