RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-223	ENST00000486991	PPP1R7	Q15435	360 aa		13.18	□□□□□ -0.3
NR1H3-223	ENST00000486991	TRIP13	Q15645	432 aa	Predicted RBP	13.18	□□□□□ -0.3
NR1H3-223	ENST00000486991	TEX44	Q53QW1	395 aa		13.18	□□□□□ -0.3
NR1H3-223	ENST00000486991	ANKRD20A2	Q5SQ80	823 aa		13.18	□□□□□ -0.3
NR1H3-223	ENST00000486991	ANKRD20A1	Q5TYW2	823 aa		13.18	□□□□□ -0.3
NR1H3-223	ENST00000486991	ANKRD20A3	Q5VUR7	823 aa		13.18	□□□□□ -0.3
NR1H3-223	ENST00000486991	ARHGEF18	Q6ZSZ5	1173 aa		13.18	□□□□□ -0.3
NR1H3-223	ENST00000486991	PID1	Q7Z2X4	250 aa		13.18	□□□□□ -0.3
NR1H3-223	ENST00000486991	ZNF567	Q8N184	647 aa		13.18	□□□□□ -0.3
NR1H3-223	ENST00000486991	TAB3	Q8N5C8	712 aa	Predicted RBP	13.18	□□□□□ -0.3
NR1H3-223	ENST00000486991	TEX26	Q8N6G2	289 aa		13.18	□□□□□ -0.3
NR1H3-223	ENST00000486991	TSEN2	Q8NCE0	465 aa	Known RBP	13.18	□□□□□ -0.3
NR1H3-223	ENST00000486991	CHST14	Q8NCH0	376 aa		13.18	□□□□□ -0.3
NR1H3-223	ENST00000486991	OR2T34	Q8NGX1	318 aa		13.18	□□□□□ -0.3
NR1H3-223	ENST00000486991	PIP4K2C	Q8TBX8	421 aa		13.18	□□□□□ -0.3
NR1H3-223	ENST00000486991	CCDC110	Q8TBZ0	833 aa		13.18	□□□□□ -0.3
NR1H3-223	ENST00000486991	EXOC2	Q96KP1	924 aa		13.18	□□□□□ -0.3
NR1H3-223	ENST00000486991	VAT1	Q99536	393 aa		13.18	□□□□□ -0.3
NR1H3-223	ENST00000486991	TM6SF2	Q9BZW4	377 aa		13.18	□□□□□ -0.3
NR1H3-223	ENST00000486991	TNKS2	Q9H2K2	1166 aa		13.18	□□□□□ -0.3
NR1H3-223	ENST00000486991	HAUS2	Q9NVX0	235 aa		13.18	□□□□□ -0.3
NR1H3-223	ENST00000486991	LHX3	Q9UBR4	397 aa		13.18	□□□□□ -0.3
NR1H3-223	ENST00000486991	PCYOX1	Q9UHG3	505 aa		13.18	□□□□□ -0.3
NR1H3-223	ENST00000486991	WASF2	Q9Y6W5	498 aa		13.18	□□□□□ -0.3
NR1H3-223	ENST00000486991	KNTC1	P50748	2209 aa		13.17	□□□□□ -0.3
NR1H3-223	ENST00000486991		A0A1W2PPC4	97 aa		13.17	□□□□□ -0.3
NR1H3-223	ENST00000486991		F5H423	210 aa	Predicted RBP	13.17	□□□□□ -0.3
NR1H3-223	ENST00000486991	TTI1	O43156	1089 aa		13.17	□□□□□ -0.3
NR1H3-223	ENST00000486991	TNFSF14	O43557	240 aa		13.17	□□□□□ -0.3
NR1H3-223	ENST00000486991	LAT	O43561	262 aa		13.17	□□□□□ -0.3
NR1H3-223	ENST00000486991	DFNA5	O60443	496 aa		13.17	□□□□□ -0.3
NR1H3-223	ENST00000486991	GCAT	O75600	419 aa		13.17	□□□□□ -0.3
NR1H3-223	ENST00000486991	KRT14	P02533	472 aa		13.17	□□□□□ -0.3
NR1H3-223	ENST00000486991	ZSCAN5DP	P0CG00	497 aa		13.17	□□□□□ -0.3
NR1H3-223	ENST00000486991	ACTN2	P35609	894 aa		13.17	□□□□□ -0.3
NR1H3-223	ENST00000486991	PTGIR	P43119	386 aa		13.17	□□□□□ -0.3
NR1H3-223	ENST00000486991	VPS41	P49754	854 aa		13.17	□□□□□ -0.3
NR1H3-223	ENST00000486991	CCT8	P50990	548 aa		13.17	□□□□□ -0.3
NR1H3-223	ENST00000486991	CCR5	P51681	352 aa		13.17	□□□□□ -0.3
NR1H3-223	ENST00000486991	C21orf59	P57076	290 aa		13.17	□□□□□ -0.3
NR1H3-223	ENST00000486991	TAS2R38	P59533	333 aa		13.17	□□□□□ -0.3
NR1H3-223	ENST00000486991	MAX	P61244	160 aa		13.17	□□□□□ -0.3
NR1H3-223	ENST00000486991	RACK1	P63244	317 aa	Known RBP	13.17	□□□□□ -0.3
NR1H3-223	ENST00000486991	DNAJC3	Q13217	504 aa		13.17	□□□□□ -0.3
NR1H3-223	ENST00000486991	DHX34	Q14147	1143 aa	Known RBP	13.17	□□□□□ -0.3
NR1H3-223	ENST00000486991	SHB	Q15464	509 aa		13.17	□□□□□ -0.3
NR1H3-223	ENST00000486991	P3H1	Q32P28	736 aa		13.17	□□□□□ -0.3
NR1H3-223	ENST00000486991	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	13.17	□□□□□ -0.3
NR1H3-223	ENST00000486991	PIP5KL1	Q5T9C9	394 aa		13.17	□□□□□ -0.3
NR1H3-223	ENST00000486991	ITPRIPL1	Q6GPH6	555 aa		13.17	□□□□□ -0.3
NR1H3-223	ENST00000486991	C8orf74	Q6P047	294 aa		13.17	□□□□□ -0.3
NR1H3-223	ENST00000486991	PGBD5	Q8N414	524 aa		13.17	□□□□□ -0.3
NR1H3-223	ENST00000486991	RYBP	Q8N488	228 aa	Predicted RBP	13.17	□□□□□ -0.3
NR1H3-223	ENST00000486991	MMGT1	Q8N4V1	131 aa		13.17	□□□□□ -0.3
NR1H3-223	ENST00000486991	CNTD1	Q8N815	330 aa		13.17	□□□□□ -0.3
NR1H3-223	ENST00000486991	GLIS1	Q8NBF1	620 aa		13.17	□□□□□ -0.3
NR1H3-223	ENST00000486991	NOA1	Q8NC60	698 aa	Known RBP	13.17	□□□□□ -0.3
NR1H3-223	ENST00000486991	OR14C36	Q8NHC7	312 aa		13.17	□□□□□ -0.3
NR1H3-223	ENST00000486991	ARRDC3	Q96B67	414 aa		13.17	□□□□□ -0.3
NR1H3-223	ENST00000486991	RTP4	Q96DX8	246 aa		13.17	□□□□□ -0.3
NR1H3-223	ENST00000486991	TEKT5	Q96M29	485 aa		13.17	□□□□□ -0.3
NR1H3-223	ENST00000486991	SPATA13	Q96N96	652 aa		13.17	□□□□□ -0.3
NR1H3-223	ENST00000486991	PSKH2	Q96QS6	385 aa		13.17	□□□□□ -0.3
NR1H3-223	ENST00000486991	CEP44	Q9C0F1	390 aa		13.17	□□□□□ -0.3
NR1H3-223	ENST00000486991	RSPH14	Q9UHP6	348 aa		13.17	□□□□□ -0.3
NR1H3-223	ENST00000486991	TRHDE	Q9UKU6	1024 aa		13.17	□□□□□ -0.3
NR1H3-223	ENST00000486991	ATP8A1	Q9Y2Q0	1164 aa		13.17	□□□□□ -0.3
NR1H3-223	ENST00000486991	ACACA	Q13085	2346 aa		13.16	□□□□□ -0.3
NR1H3-223	ENST00000486991	TTC24	A2A3L6	582 aa	Predicted RBP	13.16	□□□□□ -0.3
NR1H3-223	ENST00000486991	MUSK	O15146	869 aa		13.16	□□□□□ -0.3
NR1H3-223	ENST00000486991	RAD51C	O43502	376 aa		13.16	□□□□□ -0.3
NR1H3-223	ENST00000486991	PLRG1	O43660	514 aa	Known RBP	13.16	□□□□□ -0.3
NR1H3-223	ENST00000486991	IGSF6	O95976	241 aa		13.16	□□□□□ -0.3
NR1H3-223	ENST00000486991	NFKB1	P19838	968 aa		13.16	□□□□□ -0.3
NR1H3-223	ENST00000486991	RPL22	P35268	128 aa	Known RBP	13.16	□□□□□ -0.3
NR1H3-223	ENST00000486991	HSPA9	P38646	679 aa	Known RBP	13.16	□□□□□ -0.3
NR1H3-223	ENST00000486991	GRK6	P43250	576 aa		13.16	□□□□□ -0.3
NR1H3-223	ENST00000486991	SMAD1	Q15797	465 aa	Known RBP	13.16	□□□□□ -0.3
NR1H3-223	ENST00000486991	POM121L1P	Q3SYA9	428 aa		13.16	□□□□□ -0.3
NR1H3-223	ENST00000486991	DPY19L3	Q6ZPD9	716 aa		13.16	□□□□□ -0.3
NR1H3-223	ENST00000486991	MAATS1	Q7Z4T9	603 aa		13.16	□□□□□ -0.3
NR1H3-223	ENST00000486991	PRPF39	Q86UA1	669 aa	Known RBP	13.16	□□□□□ -0.3
NR1H3-223	ENST00000486991	JAML	Q86YT9	394 aa		13.16	□□□□□ -0.3
NR1H3-223	ENST00000486991	PCDH20	Q8N6Y1	951 aa	Known RBP	13.16	□□□□□ -0.3
NR1H3-223	ENST00000486991	LRRN4CL	Q8ND94	238 aa		13.16	□□□□□ -0.3
NR1H3-223	ENST00000486991	SLCO2A1	Q92959	643 aa		13.16	□□□□□ -0.3
NR1H3-223	ENST00000486991	ISG20	Q96AZ6	181 aa	Known RBP	13.16	□□□□□ -0.3
NR1H3-223	ENST00000486991	GDAP1L1	Q96MZ0	367 aa		13.16	□□□□□ -0.3
NR1H3-223	ENST00000486991	DCBLD2	Q96PD2	775 aa		13.16	□□□□□ -0.3
NR1H3-223	ENST00000486991	TRIM51	Q9BSJ1	452 aa		13.16	□□□□□ -0.3
NR1H3-223	ENST00000486991	POLR1E	Q9GZS1	481 aa	Known RBP	13.16	□□□□□ -0.3
NR1H3-223	ENST00000486991	GLOD4	Q9HC38	313 aa		13.16	□□□□□ -0.3
NR1H3-223	ENST00000486991	PCDH9	Q9HC56	1237 aa		13.16	□□□□□ -0.3
NR1H3-223	ENST00000486991	SCUBE2	Q9NQ36	999 aa		13.16	□□□□□ -0.3
NR1H3-223	ENST00000486991	DYRK4	Q9NR20	520 aa		13.16	□□□□□ -0.3
NR1H3-223	ENST00000486991	PAK5	Q9P286	719 aa		13.16	□□□□□ -0.3
NR1H3-223	ENST00000486991	TBC1D3D	A0A087WVF3	549 aa		13.15	□□□□□ -0.3
NR1H3-223	ENST00000486991	TBC1D3I	A0A087WXS9	549 aa		13.15	□□□□□ -0.3
NR1H3-223	ENST00000486991	TBC1D3E	A0A087X179	549 aa		13.15	□□□□□ -0.3
NR1H3-223	ENST00000486991	TBC1D3K	A0A087X1G2	549 aa		13.15	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms