RNA–Protein interactions for RNA: ENST00000486867.1

SF1-216, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-216ENST00000486867 PCDH9Q9HC56 1237 aa13.21□□□□□ -0.29
SF1-216ENST00000486867 GDF3Q9NR23 364 aa13.21□□□□□ -0.29
SF1-216ENST00000486867 DNPEPQ9ULA0 475 aa13.21□□□□□ -0.29
SF1-216ENST00000486867 CHKBQ9Y259 395 aa13.21□□□□□ -0.29
SF1-216ENST00000486867 CA5BQ9Y2D0 317 aa13.21□□□□□ -0.29
SF1-216ENST00000486867 PLXNB3Q9ULL4 1909 aa13.21□□□□□ -0.3
SF1-216ENST00000486867 TCRBV7S2A1N4TA0A589 114 aa13.2□□□□□ -0.3
SF1-216ENST00000486867 CAPN8A6NHC0 703 aa13.2□□□□□ -0.3
SF1-216ENST00000486867 FPGTO14772 594 aa13.2□□□□□ -0.3
SF1-216ENST00000486867 EPOP01588 193 aa13.2□□□□□ -0.3
SF1-216ENST00000486867 PRKCGP05129 697 aa13.2□□□□□ -0.3
SF1-216ENST00000486867 ELFN1P0C7U0 828 aa13.2□□□□□ -0.3
SF1-216ENST00000486867 THEGLP0DJG4 465 aa13.2□□□□□ -0.3
SF1-216ENST00000486867 CYP2A6P11509 494 aaPredicted RBP13.2□□□□□ -0.3
SF1-216ENST00000486867 ZNF30P17039 623 aa13.2□□□□□ -0.3
SF1-216ENST00000486867 RBL1P28749 1068 aa13.2□□□□□ -0.3
SF1-216ENST00000486867 RABIFP47224 123 aa13.2□□□□□ -0.3
SF1-216ENST00000486867 CCT8P50990 548 aa13.2□□□□□ -0.3
SF1-216ENST00000486867 CLDN2P57739 230 aa13.2□□□□□ -0.3
SF1-216ENST00000486867 EIF3EP60228 445 aaKnown RBP13.2□□□□□ -0.3
SF1-216ENST00000486867 FAM193AP78312 1265 aa13.2□□□□□ -0.3
SF1-216ENST00000486867 CDKN3Q16667 212 aa13.2□□□□□ -0.3
SF1-216ENST00000486867 KDELC1Q6UW63 502 aa13.2□□□□□ -0.3
SF1-216ENST00000486867 USP45Q70EL2 814 aa13.2□□□□□ -0.3
SF1-216ENST00000486867 SLC13A5Q86YT5 568 aaPredicted RBP13.2□□□□□ -0.3
SF1-216ENST00000486867 CDKL3Q8IVW4 592 aaPredicted RBP13.2□□□□□ -0.3
SF1-216ENST00000486867 BAHD1Q8TBE0 780 aaPredicted RBP13.2□□□□□ -0.3
SF1-216ENST00000486867 PDCD6IPQ8WUM4 868 aaKnown RBP13.2□□□□□ -0.3
SF1-216ENST00000486867 RTP4Q96DX8 246 aa13.2□□□□□ -0.3
SF1-216ENST00000486867 RBM15Q96T37 977 aaKnown RBP eCLIP13.2□□□□□ -0.3
SF1-216ENST00000486867 FRMD8P1Q9BZ68 369 aaPredicted RBP13.2□□□□□ -0.3
SF1-216ENST00000486867 TM7SF3Q9NS93 570 aa13.2□□□□□ -0.3
SF1-216ENST00000486867 R3HDM2Q9Y2K5 976 aaKnown RBP13.2□□□□□ -0.3
SF1-216ENST00000486867 TTLL3Q9Y4R7 772 aa13.2□□□□□ -0.3
SF1-216ENST00000486867 PTPRBP23467 1997 aa13.2□□□□□ -0.3
SF1-216ENST00000486867 SPTY2D1-AS1A0A0U1RR47 76 aa13.19□□□□□ -0.3
SF1-216ENST00000486867 LOC285095A0A1B0GVY8 99 aa13.19□□□□□ -0.3
SF1-216ENST00000486867 GOLGA6L9A6NEM1 432 aa13.19□□□□□ -0.3
SF1-216ENST00000486867 ANKRD66B4E2M5 251 aa13.19□□□□□ -0.3
SF1-216ENST00000486867 H7C0C1 242 aa13.19□□□□□ -0.3
SF1-216ENST00000486867 CBFA2T3O75081 653 aa13.19□□□□□ -0.3
SF1-216ENST00000486867 RECQL5O94762 991 aaPredicted RBP13.19□□□□□ -0.3
SF1-216ENST00000486867 HOXC4P09017 264 aaPredicted RBP13.19□□□□□ -0.3
SF1-216ENST00000486867 NFKB1P19838 968 aa13.19□□□□□ -0.3
SF1-216ENST00000486867 TEAD1P28347 426 aa13.19□□□□□ -0.3
SF1-216ENST00000486867 HNF1BP35680 557 aa13.19□□□□□ -0.3
SF1-216ENST00000486867 TRIM23P36406 574 aa13.19□□□□□ -0.3
SF1-216ENST00000486867 ATP5OP48047 213 aa13.19□□□□□ -0.3
SF1-216ENST00000486867 STC1P52823 247 aa13.19□□□□□ -0.3
SF1-216ENST00000486867 DPTQ07507 201 aa13.19□□□□□ -0.3
SF1-216ENST00000486867 MTM1Q13496 603 aa13.19□□□□□ -0.3
SF1-216ENST00000486867 LRRC14Q15048 493 aa13.19□□□□□ -0.3
SF1-216ENST00000486867 IRF4Q15306 451 aa13.19□□□□□ -0.3
SF1-216ENST00000486867 SIX1Q15475 284 aaPredicted RBP13.19□□□□□ -0.3
SF1-216ENST00000486867 OASLQ15646 514 aaKnown RBP13.19□□□□□ -0.3
SF1-216ENST00000486867 QPCTQ16769 361 aa13.19□□□□□ -0.3
SF1-216ENST00000486867 CCDC181Q5TID7 509 aa13.19□□□□□ -0.3
SF1-216ENST00000486867 ESRP1Q6NXG1 681 aaKnown RBP13.19□□□□□ -0.3
SF1-216ENST00000486867 CRTC1Q6UUV9 634 aa13.19□□□□□ -0.3
SF1-216ENST00000486867 Q6ZSR6 202 aa13.19□□□□□ -0.3
SF1-216ENST00000486867 ZNF765Q7L2R6 523 aa13.19□□□□□ -0.3
SF1-216ENST00000486867 TECPR1Q7Z6L1 1165 aa13.19□□□□□ -0.3
SF1-216ENST00000486867 NLRP8Q86W28 1048 aa13.19□□□□□ -0.3
SF1-216ENST00000486867 NDUFAF2Q8N183 169 aa13.19□□□□□ -0.3
SF1-216ENST00000486867 SPATA22Q8NHS9 363 aa13.19□□□□□ -0.3
SF1-216ENST00000486867 DTD2Q96FN9 168 aa13.19□□□□□ -0.3
SF1-216ENST00000486867 MYOCQ99972 504 aa13.19□□□□□ -0.3
SF1-216ENST00000486867 GORASP1Q9BQQ3 440 aa13.19□□□□□ -0.3
SF1-216ENST00000486867 ADGRE3Q9BY15 652 aa13.19□□□□□ -0.3
SF1-216ENST00000486867 GBA3Q9H227 469 aa13.19□□□□□ -0.3
SF1-216ENST00000486867 MBNL1Q9NR56 388 aaKnown RBP13.19□□□□□ -0.3
SF1-216ENST00000486867 SEPT10Q9P0V9 454 aa13.19□□□□□ -0.3
SF1-216ENST00000486867 FAM153AQ9UHL3 310 aa13.19□□□□□ -0.3
SF1-216ENST00000486867 COQ6Q9Y2Z9 468 aa13.19□□□□□ -0.3
SF1-216ENST00000486867 C5orf60A6NFR6 353 aa13.18□□□□□ -0.3
SF1-216ENST00000486867 FLRT2O43155 660 aa13.18□□□□□ -0.3
SF1-216ENST00000486867 ZSCAN12O43309 604 aa13.18□□□□□ -0.3
SF1-216ENST00000486867 NDST3O95803 873 aa13.18□□□□□ -0.3
SF1-216ENST00000486867 MT-CYBP00156 380 aaPredicted RBP13.18□□□□□ -0.3
SF1-216ENST00000486867 ALPIP09923 528 aa13.18□□□□□ -0.3
SF1-216ENST00000486867 CEACAM1P13688 526 aa13.18□□□□□ -0.3
SF1-216ENST00000486867 EPHA8P29322 1005 aaPredicted RBP13.18□□□□□ -0.3
SF1-216ENST00000486867 SEMG2Q02383 582 aa13.18□□□□□ -0.3
SF1-216ENST00000486867 PTSQ03393 145 aa13.18□□□□□ -0.3
SF1-216ENST00000486867 CDK18Q07002 472 aa13.18□□□□□ -0.3
SF1-216ENST00000486867 FZD2Q14332 565 aa13.18□□□□□ -0.3
SF1-216ENST00000486867 PTPRRQ15256 657 aa13.18□□□□□ -0.3
SF1-216ENST00000486867 TPRG1LQ5T0D9 272 aa13.18□□□□□ -0.3
SF1-216ENST00000486867 SEL1L2Q5TEA6 688 aa13.18□□□□□ -0.3
SF1-216ENST00000486867 DRICH1Q6PGQ1 229 aaPredicted RBP13.18□□□□□ -0.3
SF1-216ENST00000486867 HSD11B1LQ7Z5J1 315 aa13.18□□□□□ -0.3
SF1-216ENST00000486867 TSPAN33Q86UF1 283 aa13.18□□□□□ -0.3
SF1-216ENST00000486867 SAP25Q8TEE9 199 aa13.18□□□□□ -0.3
SF1-216ENST00000486867 OXNAD1Q96HP4 312 aaPredicted RBP13.18□□□□□ -0.3
SF1-216ENST00000486867 TBATAQ96M53 351 aa13.18□□□□□ -0.3
SF1-216ENST00000486867 SPATA13Q96N96 652 aa13.18□□□□□ -0.3
SF1-216ENST00000486867 FERMT1Q9BQL6 677 aa13.18□□□□□ -0.3
SF1-216ENST00000486867 MAGEE1Q9HCI5 957 aa13.18□□□□□ -0.3
SF1-216ENST00000486867 KLHL8Q9P2G9 620 aaPredicted RBP13.18□□□□□ -0.3
SF1-216ENST00000486867 NFKBIL1Q9UBC1 381 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms