RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 TLR5O60602 858 aa18.03■□□□□ 0.48
PDLIM7-207ENST00000486828 GLP2RO95838 553 aa18.03■□□□□ 0.48
PDLIM7-207ENST00000486828 GOT2P00505 430 aaKnown RBP18.03■□□□□ 0.48
PDLIM7-207ENST00000486828 PENKP01210 267 aaPredicted RBP18.03■□□□□ 0.48
PDLIM7-207ENST00000486828 ALDH2P05091 517 aa18.03■□□□□ 0.48
PDLIM7-207ENST00000486828 ENO3P13929 434 aaPredicted RBP18.03■□□□□ 0.48
PDLIM7-207ENST00000486828 IMPDH1P20839 514 aa18.03■□□□□ 0.48
PDLIM7-207ENST00000486828 FDXRP22570 491 aa18.03■□□□□ 0.48
PDLIM7-207ENST00000486828 PLK1P53350 603 aa18.03■□□□□ 0.48
PDLIM7-207ENST00000486828 ART3Q13508 389 aa18.03■□□□□ 0.48
PDLIM7-207ENST00000486828 LPCAT4Q643R3 524 aa18.03■□□□□ 0.48
PDLIM7-207ENST00000486828 PHF21BQ96EK2 531 aa18.03■□□□□ 0.48
PDLIM7-207ENST00000486828 DNAJC1Q96KC8 554 aaKnown RBP18.03■□□□□ 0.48
PDLIM7-207ENST00000486828 TRMOQ9BU70 441 aa18.03■□□□□ 0.48
PDLIM7-207ENST00000486828 GSTO2Q9H4Y5 243 aa18.03■□□□□ 0.48
PDLIM7-207ENST00000486828 TNFRSF12AQ9NP84 129 aa18.03■□□□□ 0.48
PDLIM7-207ENST00000486828 PACSIN3Q9UKS6 424 aa18.03■□□□□ 0.48
PDLIM7-207ENST00000486828 FIS1Q9Y3D6 152 aa18.03■□□□□ 0.48
PDLIM7-207ENST00000486828 PCDHB7Q9Y5E2 793 aa18.03■□□□□ 0.48
PDLIM7-207ENST00000486828 ARL5AQ9Y689 179 aa18.03■□□□□ 0.48
PDLIM7-207ENST00000486828 F5H5T6 163 aa18.02■□□□□ 0.48
PDLIM7-207ENST00000486828 HOXB8P17481 243 aaPredicted RBP18.02■□□□□ 0.48
PDLIM7-207ENST00000486828 SLC11A1P49279 550 aa18.02■□□□□ 0.48
PDLIM7-207ENST00000486828 INHBCP55103 352 aa18.02■□□□□ 0.48
PDLIM7-207ENST00000486828 C5orf22Q49AR2 442 aa18.02■□□□□ 0.48
PDLIM7-207ENST00000486828 ALG1LQ6GMV1 187 aa18.02■□□□□ 0.48
PDLIM7-207ENST00000486828 FUT10Q6P4F1 479 aa18.02■□□□□ 0.48
PDLIM7-207ENST00000486828 RPS27LQ71UM5 84 aaKnown RBP18.02■□□□□ 0.48
PDLIM7-207ENST00000486828 LRRC8DQ7L1W4 858 aa18.02■□□□□ 0.48
PDLIM7-207ENST00000486828 SDCCAG8Q86SQ7 713 aaPredicted RBP18.02■□□□□ 0.48
PDLIM7-207ENST00000486828 ISCA2Q86U28 154 aa18.02■□□□□ 0.48
PDLIM7-207ENST00000486828 LGI2Q8N0V4 545 aa18.02■□□□□ 0.48
PDLIM7-207ENST00000486828 BRSK1Q8TDC3 778 aa18.02■□□□□ 0.48
PDLIM7-207ENST00000486828 BLOC1S5Q8TDH9 187 aa18.02■□□□□ 0.48
PDLIM7-207ENST00000486828 L3HYPDHQ96EM0 354 aa18.02■□□□□ 0.48
PDLIM7-207ENST00000486828 TSEN34Q9BSV6 310 aaKnown RBP18.02■□□□□ 0.48
PDLIM7-207ENST00000486828 ALG9Q9H6U8 611 aa18.02■□□□□ 0.48
PDLIM7-207ENST00000486828 RIMKLBQ9ULI2 386 aa18.02■□□□□ 0.48
PDLIM7-207ENST00000486828 CRYL1Q9Y2S2 319 aa18.02■□□□□ 0.48
PDLIM7-207ENST00000486828 A0A1W2PQ45 241 aaPredicted RBP18.02■□□□□ 0.47
PDLIM7-207ENST00000486828 A0A1W2PQY0 241 aa18.02■□□□□ 0.47
PDLIM7-207ENST00000486828 ENPP3O14638 875 aa18.02■□□□□ 0.47
PDLIM7-207ENST00000486828 CD3EAPO15446 510 aaKnown RBP18.02■□□□□ 0.47
PDLIM7-207ENST00000486828 RPP40O75818 363 aaKnown RBP18.02■□□□□ 0.47
PDLIM7-207ENST00000486828 PEX2P28328 305 aa18.02■□□□□ 0.47
PDLIM7-207ENST00000486828 GATMP50440 423 aa18.02■□□□□ 0.47
PDLIM7-207ENST00000486828 NFKB2Q00653 900 aa18.02■□□□□ 0.47
PDLIM7-207ENST00000486828 CEACAM7Q14002 265 aa18.02■□□□□ 0.47
PDLIM7-207ENST00000486828 GALNT3Q14435 633 aa18.02■□□□□ 0.47
PDLIM7-207ENST00000486828 LRRC36Q1X8D7 754 aa18.02■□□□□ 0.47
PDLIM7-207ENST00000486828 OR52E8Q6IFG1 317 aa18.02■□□□□ 0.47
PDLIM7-207ENST00000486828 MRNIPQ6NTE8 343 aa18.02■□□□□ 0.47
PDLIM7-207ENST00000486828 PIM3Q86V86 326 aa18.02■□□□□ 0.47
PDLIM7-207ENST00000486828 C2orf15Q8WU43 125 aaKnown RBP18.02■□□□□ 0.47
PDLIM7-207ENST00000486828 PPP1R12CQ9BZL4 782 aa18.02■□□□□ 0.47
PDLIM7-207ENST00000486828 BCAP29Q9UHQ4 241 aa18.02■□□□□ 0.47
PDLIM7-207ENST00000486828 PSMD13Q9UNM6 376 aa18.02■□□□□ 0.47
PDLIM7-207ENST00000486828 H7C4K7 107 aa18.01■□□□□ 0.47
PDLIM7-207ENST00000486828 CFLARO15519 480 aa18.01■□□□□ 0.47
PDLIM7-207ENST00000486828 PEX1O43933 1283 aa18.01■□□□□ 0.47
PDLIM7-207ENST00000486828 SERPINF2P08697 491 aa18.01■□□□□ 0.47
PDLIM7-207ENST00000486828 XRCC1P18887 633 aaPredicted RBP18.01■□□□□ 0.47
PDLIM7-207ENST00000486828 DPP6P42658 865 aa18.01■□□□□ 0.47
PDLIM7-207ENST00000486828 KCNQ1P51787 676 aa18.01■□□□□ 0.47
PDLIM7-207ENST00000486828 DUSP4Q13115 394 aa18.01■□□□□ 0.47
PDLIM7-207ENST00000486828 FLOT2Q14254 428 aa18.01■□□□□ 0.47
PDLIM7-207ENST00000486828 SQLEQ14534 574 aa18.01■□□□□ 0.47
PDLIM7-207ENST00000486828 TRIP10Q15642 601 aa18.01■□□□□ 0.47
PDLIM7-207ENST00000486828 SFT2D3Q587I9 215 aa18.01■□□□□ 0.47
PDLIM7-207ENST00000486828 RTP2Q5QGT7 225 aa18.01■□□□□ 0.47
PDLIM7-207ENST00000486828 ZNF678Q5SXM1 525 aa18.01■□□□□ 0.47
PDLIM7-207ENST00000486828 ZNF549Q6P9A3 640 aa18.01■□□□□ 0.47
PDLIM7-207ENST00000486828 SH3RF2Q8TEC5 729 aa18.01■□□□□ 0.47
PDLIM7-207ENST00000486828 GIPC2Q8TF65 315 aa18.01■□□□□ 0.47
PDLIM7-207ENST00000486828 MAGEH1Q9H213 219 aa18.01■□□□□ 0.47
PDLIM7-207ENST00000486828 EBF3Q9H4W6 596 aa18.01■□□□□ 0.47
PDLIM7-207ENST00000486828 STARD7Q9NQZ5 370 aa18.01■□□□□ 0.47
PDLIM7-207ENST00000486828 UTP6Q9NYH9 597 aaKnown RBP18.01■□□□□ 0.47
PDLIM7-207ENST00000486828 C6orf203Q9P0P8 240 aaPredicted RBP18.01■□□□□ 0.47
PDLIM7-207ENST00000486828 CCDC162PA2VCL2 907 aa18■□□□□ 0.47
PDLIM7-207ENST00000486828 SLC38A8A6NNN8 435 aa18■□□□□ 0.47
PDLIM7-207ENST00000486828 UPP2O95045 317 aa18■□□□□ 0.47
PDLIM7-207ENST00000486828 SLC4A1P02730 911 aa18■□□□□ 0.47
PDLIM7-207ENST00000486828 CD1DP15813 335 aa18■□□□□ 0.47
PDLIM7-207ENST00000486828 SELPP16109 830 aa18■□□□□ 0.47
PDLIM7-207ENST00000486828 OGNP20774 298 aaKnown RBP18■□□□□ 0.47
PDLIM7-207ENST00000486828 HOXD9P28356 352 aaPredicted RBP18■□□□□ 0.47
PDLIM7-207ENST00000486828 KCNC1P48547 511 aa18■□□□□ 0.47
PDLIM7-207ENST00000486828 SUOXP51687 545 aa18■□□□□ 0.47
PDLIM7-207ENST00000486828 PKNOX1P55347 436 aa18■□□□□ 0.47
PDLIM7-207ENST00000486828 ELAVL2Q12926 359 aaKnown RBP18■□□□□ 0.47
PDLIM7-207ENST00000486828 PTPRCAPQ14761 206 aa18■□□□□ 0.47
PDLIM7-207ENST00000486828 MAPRE2Q15555 327 aa18■□□□□ 0.47
PDLIM7-207ENST00000486828 GK5Q6ZS86 529 aa18■□□□□ 0.47
PDLIM7-207ENST00000486828 CFAP52Q8N1V2 620 aa18■□□□□ 0.47
PDLIM7-207ENST00000486828 BBS5Q8N3I7 341 aa18■□□□□ 0.47
PDLIM7-207ENST00000486828 NPAS2Q99743 824 aa18■□□□□ 0.47
PDLIM7-207ENST00000486828 MGME1Q9BQP7 344 aa18■□□□□ 0.47
PDLIM7-207ENST00000486828 TTLL2Q9BWV7 592 aa18■□□□□ 0.47
PDLIM7-207ENST00000486828 POPDC3Q9HBV1 291 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms