RNA–Protein interactions for RNA: ENST00000486085.5

RTN4-214, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-214ENST00000486085 ZC3HAV1LQ96H79 300 aaKnown RBP6.26□□□□□ -1.41
RTN4-214ENST00000486085 GFM1Q96RP9 751 aaKnown RBP6.26□□□□□ -1.41
RTN4-214ENST00000486085 CDT1Q9H211 546 aa6.26□□□□□ -1.41
RTN4-214ENST00000486085 SQORQ9Y6N5 450 aa6.26□□□□□ -1.41
RTN4-214ENST00000486085 SBNO1A3KN83 1393 aa6.26□□□□□ -1.41
RTN4-214ENST00000486085 MED1Q15648 1581 aaPredicted RBP6.26□□□□□ -1.41
RTN4-214ENST00000486085 PCSK5Q92824 1860 aa6.26□□□□□ -1.41
RTN4-214ENST00000486085 USP6P35125 1406 aa6.25□□□□□ -1.41
RTN4-214ENST00000486085 PPIP5K1Q6PFW1 1433 aa6.25□□□□□ -1.41
RTN4-214ENST00000486085 KLRF2D3W0D1 207 aa6.25□□□□□ -1.41
RTN4-214ENST00000486085 IFNL4K9M1U5 179 aa6.25□□□□□ -1.41
RTN4-214ENST00000486085 SNAP23O00161 211 aa6.25□□□□□ -1.41
RTN4-214ENST00000486085 TMEM63AO94886 807 aa6.25□□□□□ -1.41
RTN4-214ENST00000486085 CYP1A2P05177 515 aa6.25□□□□□ -1.41
RTN4-214ENST00000486085 SRD5A1P18405 259 aa6.25□□□□□ -1.41
RTN4-214ENST00000486085 TBXAS1P24557 533 aaPredicted RBP6.25□□□□□ -1.41
RTN4-214ENST00000486085 RGS2P41220 211 aa6.25□□□□□ -1.41
RTN4-214ENST00000486085 POLD2P49005 469 aa6.25□□□□□ -1.41
RTN4-214ENST00000486085 CXCR3P49682 368 aa6.25□□□□□ -1.41
RTN4-214ENST00000486085 GNAQP50148 359 aa6.25□□□□□ -1.41
RTN4-214ENST00000486085 RASSF2P50749 326 aa6.25□□□□□ -1.41
RTN4-214ENST00000486085 P2RX3P56373 397 aa6.25□□□□□ -1.41
RTN4-214ENST00000486085 GPR18Q14330 331 aa6.25□□□□□ -1.41
RTN4-214ENST00000486085 TBCEQ15813 527 aaPredicted RBP6.25□□□□□ -1.41
RTN4-214ENST00000486085 PRAMEF19Q5SWL8 479 aa6.25□□□□□ -1.41
RTN4-214ENST00000486085 CCDC30Q5VVM6 783 aa6.25□□□□□ -1.41
RTN4-214ENST00000486085 LRRC8EQ6NSJ5 796 aa6.25□□□□□ -1.41
RTN4-214ENST00000486085 CPLX2Q6PUV4 134 aaKnown RBP6.25□□□□□ -1.41
RTN4-214ENST00000486085 C1orf122Q6ZSJ8 110 aa6.25□□□□□ -1.41
RTN4-214ENST00000486085 Q6ZTK2 550 aa6.25□□□□□ -1.41
RTN4-214ENST00000486085 PALB2Q86YC2 1186 aa6.25□□□□□ -1.41
RTN4-214ENST00000486085 DENND6AQ8IWF6 608 aa6.25□□□□□ -1.41
RTN4-214ENST00000486085 CADM4Q8NFZ8 388 aa6.25□□□□□ -1.41
RTN4-214ENST00000486085 SMG7Q92540 1137 aaKnown RBP6.25□□□□□ -1.41
RTN4-214ENST00000486085 HMCESQ96FZ2 354 aa6.25□□□□□ -1.41
RTN4-214ENST00000486085 APOLD1Q96LR9 279 aa6.25□□□□□ -1.41
RTN4-214ENST00000486085 BBS4Q96RK4 519 aa6.25□□□□□ -1.41
RTN4-214ENST00000486085 GLIS2Q9BZE0 524 aaPredicted RBP6.25□□□□□ -1.41
RTN4-214ENST00000486085 TERF2IPQ9NYB0 399 aa6.25□□□□□ -1.41
RTN4-214ENST00000486085 NCKIPSDQ9NZQ3 722 aa6.25□□□□□ -1.41
RTN4-214ENST00000486085 NDRG3Q9UGV2 375 aa6.25□□□□□ -1.41
RTN4-214ENST00000486085 A4GNTQ9UNA3 340 aa6.25□□□□□ -1.41
RTN4-214ENST00000486085 CARD8Q9Y2G2 431 aa6.25□□□□□ -1.41
RTN4-214ENST00000486085 TRPM3Q9HCF6 1732 aaPredicted RBP6.25□□□□□ -1.41
RTN4-214ENST00000486085 ABCC6O95255 1503 aa6.25□□□□□ -1.41
RTN4-214ENST00000486085 TTC21AQ8NDW8 1320 aa6.25□□□□□ -1.41
RTN4-214ENST00000486085 PXDNQ92626 1479 aa6.24□□□□□ -1.41
RTN4-214ENST00000486085 A0A1W2PP64 1363 aa6.24□□□□□ -1.41
RTN4-214ENST00000486085 NPIPB15A6NHN6 443 aaPredicted RBP6.24□□□□□ -1.41
RTN4-214ENST00000486085 HSPB2A8KAH6 182 aa6.24□□□□□ -1.41
RTN4-214ENST00000486085 I6L893 689 aaPredicted RBP6.24□□□□□ -1.41
RTN4-214ENST00000486085 SEC31AO94979 1220 aaKnown RBP6.24□□□□□ -1.41
RTN4-214ENST00000486085 SPARCP09486 303 aa6.24□□□□□ -1.41
RTN4-214ENST00000486085 HSPA1AP0DMV8 641 aaKnown RBP6.24□□□□□ -1.41
RTN4-214ENST00000486085 HSPA1BP0DMV9 641 aaKnown RBP6.24□□□□□ -1.41
RTN4-214ENST00000486085 IRF1P10914 325 aa6.24□□□□□ -1.41
RTN4-214ENST00000486085 PCNAP12004 261 aa6.24□□□□□ -1.41
RTN4-214ENST00000486085 ARSBP15848 533 aa6.24□□□□□ -1.41
RTN4-214ENST00000486085 CPOXP36551 454 aa6.24□□□□□ -1.41
RTN4-214ENST00000486085 EIF3BP55884 814 aaKnown RBP6.24□□□□□ -1.41
RTN4-214ENST00000486085 HSPB2Q16082 182 aa6.24□□□□□ -1.41
RTN4-214ENST00000486085 GSTA3Q16772 222 aa6.24□□□□□ -1.41
RTN4-214ENST00000486085 TDRPQ86YL5 185 aa6.24□□□□□ -1.41
RTN4-214ENST00000486085 DHX40Q8IX18 779 aaKnown RBP6.24□□□□□ -1.41
RTN4-214ENST00000486085 TEX45Q8NA69 505 aa6.24□□□□□ -1.41
RTN4-214ENST00000486085 GJC3Q8NFK1 279 aa6.24□□□□□ -1.41
RTN4-214ENST00000486085 UBE2Q2Q8WVN8 375 aa6.24□□□□□ -1.41
RTN4-214ENST00000486085 PIP5K1AQ99755 562 aa6.24□□□□□ -1.41
RTN4-214ENST00000486085 H2AFJQ9BTM1 129 aa6.24□□□□□ -1.41
RTN4-214ENST00000486085 RANBP17Q9H2T7 1088 aaKnown RBP6.24□□□□□ -1.41
RTN4-214ENST00000486085 KRCC1Q9NPI7 259 aaPredicted RBP6.24□□□□□ -1.41
RTN4-214ENST00000486085 FAM96BQ9Y3D0 163 aa6.24□□□□□ -1.41
RTN4-214ENST00000486085 ANKRD26Q9UPS8 1709 aa6.24□□□□□ -1.41
RTN4-214ENST00000486085 PHRF1Q9P1Y6 1649 aaKnown RBP6.24□□□□□ -1.41
RTN4-214ENST00000486085 OVOS2A0A0J9YW53 1432 aa6.24□□□□□ -1.41
RTN4-214ENST00000486085 OVOS2Q6IE36 1432 aa6.24□□□□□ -1.41
RTN4-214ENST00000486085 NPHP3Q7Z494 1330 aa6.24□□□□□ -1.41
RTN4-214ENST00000486085 ALS2Q96Q42 1657 aa6.23□□□□□ -1.41
RTN4-214ENST00000486085 KIF24Q5T7B8 1368 aa6.23□□□□□ -1.41
RTN4-214ENST00000486085 A0A087X0M5 115 aa6.23□□□□□ -1.41
RTN4-214ENST00000486085 A0A1B0GX30 115 aa6.23□□□□□ -1.41
RTN4-214ENST00000486085 RPS10-NUDT3A0A1W2PQS6 291 aa6.23□□□□□ -1.41
RTN4-214ENST00000486085 BECN2A8MW95 431 aa6.23□□□□□ -1.41
RTN4-214ENST00000486085 B4DGG1 531 aa6.23□□□□□ -1.41
RTN4-214ENST00000486085 CHL1O00533 1208 aa6.23□□□□□ -1.41
RTN4-214ENST00000486085 TGFB1I1O43294 461 aa6.23□□□□□ -1.41
RTN4-214ENST00000486085 CBSLP0DN79 551 aa6.23□□□□□ -1.41
RTN4-214ENST00000486085 DCTDP32321 178 aa6.23□□□□□ -1.41
RTN4-214ENST00000486085 ICAM3P32942 547 aa6.23□□□□□ -1.41
RTN4-214ENST00000486085 CBSP35520 551 aa6.23□□□□□ -1.41
RTN4-214ENST00000486085 ENTPD1P49961 510 aa6.23□□□□□ -1.41
RTN4-214ENST00000486085 PMS2P54278 862 aa6.23□□□□□ -1.41
RTN4-214ENST00000486085 HDAC4P56524 1084 aa6.23□□□□□ -1.41
RTN4-214ENST00000486085 LMOD3Q0VAK6 560 aa6.23□□□□□ -1.41
RTN4-214ENST00000486085 TRAF1Q13077 416 aa6.23□□□□□ -1.41
RTN4-214ENST00000486085 LAMB3Q13751 1172 aa6.23□□□□□ -1.41
RTN4-214ENST00000486085 ARHGEF6Q15052 776 aa6.23□□□□□ -1.41
RTN4-214ENST00000486085 RNPS1Q15287 305 aaKnown RBP6.23□□□□□ -1.41
RTN4-214ENST00000486085 MAPRE1Q15691 268 aaKnown RBP6.23□□□□□ -1.41
RTN4-214ENST00000486085 HIST2H2ACQ16777 129 aaPredicted RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms