RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 PNCKQ6P2M8 343 aa11.5□□□□□ -0.57
SCFD1-206ENST00000484733 POLNQ7Z5Q5 900 aa11.5□□□□□ -0.57
SCFD1-206ENST00000484733 TEKT4Q8WW24 435 aa11.5□□□□□ -0.57
SCFD1-206ENST00000484733 NAF1Q96HR8 494 aaKnown RBP11.5□□□□□ -0.57
SCFD1-206ENST00000484733 TMEM74Q96NL1 305 aa11.5□□□□□ -0.57
SCFD1-206ENST00000484733 GFM1Q96RP9 751 aaKnown RBP11.5□□□□□ -0.57
SCFD1-206ENST00000484733 NUDCD1Q96RS6 583 aa11.5□□□□□ -0.57
SCFD1-206ENST00000484733 LRRN3Q9H3W5 708 aa11.5□□□□□ -0.57
SCFD1-206ENST00000484733 RABGEF1Q9UJ41 708 aa11.5□□□□□ -0.57
SCFD1-206ENST00000484733 PCDHGA7Q9Y5G6 932 aa11.5□□□□□ -0.57
SCFD1-206ENST00000484733 RP1P56715 2156 aa11.5□□□□□ -0.57
SCFD1-206ENST00000484733 KLK10O43240 276 aa11.49□□□□□ -0.57
SCFD1-206ENST00000484733 ITGA2BP08514 1039 aa11.49□□□□□ -0.57
SCFD1-206ENST00000484733 NFKBIAP25963 317 aa11.49□□□□□ -0.57
SCFD1-206ENST00000484733 TEAD1P28347 426 aa11.49□□□□□ -0.57
SCFD1-206ENST00000484733 ARL4AP40617 200 aa11.49□□□□□ -0.57
SCFD1-206ENST00000484733 SCNN1BP51168 640 aa11.49□□□□□ -0.57
SCFD1-206ENST00000484733 CCL7P80098 99 aa11.49□□□□□ -0.57
SCFD1-206ENST00000484733 SLC10A7Q0GE19 358 aa11.49□□□□□ -0.57
SCFD1-206ENST00000484733 NR1I3Q14994 352 aa11.49□□□□□ -0.57
SCFD1-206ENST00000484733 RD3Q7Z3Z2 195 aa11.49□□□□□ -0.57
SCFD1-206ENST00000484733 PDXPQ96GD0 296 aa11.49□□□□□ -0.57
SCFD1-206ENST00000484733 STRADBQ9C0K7 418 aa11.49□□□□□ -0.57
SCFD1-206ENST00000484733 SIRPGQ9P1W8 387 aa11.49□□□□□ -0.57
SCFD1-206ENST00000484733 ACSL6Q9UKU0 697 aa11.49□□□□□ -0.57
SCFD1-206ENST00000484733 PHTF1Q9UMS5 762 aa11.49□□□□□ -0.57
SCFD1-206ENST00000484733 A0A1W2PQM1 296 aa11.49□□□□□ -0.57
SCFD1-206ENST00000484733 TMEM202A6NGA9 273 aa11.49□□□□□ -0.57
SCFD1-206ENST00000484733 D6RAR5 112 aa11.49□□□□□ -0.57
SCFD1-206ENST00000484733 NOBOXO60393 691 aa11.49□□□□□ -0.57
SCFD1-206ENST00000484733 TNFSF15O95150 251 aa11.49□□□□□ -0.57
SCFD1-206ENST00000484733 GLB1P16278 677 aa11.49□□□□□ -0.57
SCFD1-206ENST00000484733 IL1R2P27930 398 aa11.49□□□□□ -0.57
SCFD1-206ENST00000484733 VIPR1P32241 457 aa11.49□□□□□ -0.57
SCFD1-206ENST00000484733 INHBCP55103 352 aa11.49□□□□□ -0.57
SCFD1-206ENST00000484733 PIGHQ14442 188 aaPredicted RBP11.49□□□□□ -0.57
SCFD1-206ENST00000484733 NYAP1Q6ZVC0 841 aa11.49□□□□□ -0.57
SCFD1-206ENST00000484733 LRRC49Q8IUZ0 686 aa11.49□□□□□ -0.57
SCFD1-206ENST00000484733 TP53INP2Q8IXH6 220 aa11.49□□□□□ -0.57
SCFD1-206ENST00000484733 NIPA2Q8N8Q9 360 aa11.49□□□□□ -0.57
SCFD1-206ENST00000484733 SYN2Q92777 582 aaPredicted RBP11.49□□□□□ -0.57
SCFD1-206ENST00000484733 TMEM159Q96B96 161 aa11.49□□□□□ -0.57
SCFD1-206ENST00000484733 NAP1L5Q96NT1 182 aaPredicted RBP11.49□□□□□ -0.57
SCFD1-206ENST00000484733 MGME1Q9BQP7 344 aa11.49□□□□□ -0.57
SCFD1-206ENST00000484733 FGF22Q9HCT0 170 aa11.49□□□□□ -0.57
SCFD1-206ENST00000484733 B4GALT6Q9UBX8 382 aa11.49□□□□□ -0.57
SCFD1-206ENST00000484733 PPIL1Q9Y3C6 166 aa11.49□□□□□ -0.57
SCFD1-206ENST00000484733 BZW2Q9Y6E2 419 aaKnown RBP11.49□□□□□ -0.57
SCFD1-206ENST00000484733 PTPRQQ9UMZ3 2332 aa11.49□□□□□ -0.57
SCFD1-206ENST00000484733 PSMD11O00231 422 aa11.48□□□□□ -0.57
SCFD1-206ENST00000484733 PLD2O14939 933 aa11.48□□□□□ -0.57
SCFD1-206ENST00000484733 MAFKO60675 156 aa11.48□□□□□ -0.57
SCFD1-206ENST00000484733 PRB1P04280 392 aa11.48□□□□□ -0.57
SCFD1-206ENST00000484733 AMPD1P23109 780 aa11.48□□□□□ -0.57
SCFD1-206ENST00000484733 HLTFQ14527 1009 aaKnown RBP eCLIP11.48□□□□□ -0.571e-7■□□□□ 9.6
SCFD1-206ENST00000484733 ZNF235Q14590 738 aa11.48□□□□□ -0.57
SCFD1-206ENST00000484733 C14orf28Q4W4Y0 310 aa11.48□□□□□ -0.57
SCFD1-206ENST00000484733 CERCAMQ5T4B2 595 aa11.48□□□□□ -0.57
SCFD1-206ENST00000484733 KCTD16Q68DU8 428 aa11.48□□□□□ -0.57
SCFD1-206ENST00000484733 TMCO3Q6UWJ1 677 aa11.48□□□□□ -0.57
SCFD1-206ENST00000484733 C17orf82Q86X59 251 aaPredicted RBP11.48□□□□□ -0.57
SCFD1-206ENST00000484733 BBS5Q8N3I7 341 aa11.48□□□□□ -0.57
SCFD1-206ENST00000484733 PGBD5Q8N414 524 aa11.48□□□□□ -0.57
SCFD1-206ENST00000484733 FBXO39Q8N4B4 442 aa11.48□□□□□ -0.57
SCFD1-206ENST00000484733 FAM71BQ8TC56 605 aa11.48□□□□□ -0.57
SCFD1-206ENST00000484733 TEX101Q9BY14 249 aa11.48□□□□□ -0.57
SCFD1-206ENST00000484733 WDR26Q9H7D7 661 aa11.48□□□□□ -0.57
SCFD1-206ENST00000484733 CPNE5Q9HCH3 593 aa11.48□□□□□ -0.57
SCFD1-206ENST00000484733 MYO1AQ9UBC5 1043 aa11.48□□□□□ -0.57
SCFD1-206ENST00000484733 A0A1W2PQJ5 194 aa11.48□□□□□ -0.57
SCFD1-206ENST00000484733 K7ENP7 123 aa11.48□□□□□ -0.57
SCFD1-206ENST00000484733 CASC3O15234 703 aaKnown RBP11.48□□□□□ -0.57
SCFD1-206ENST00000484733 HEXIM1O94992 359 aaKnown RBP11.48□□□□□ -0.57
SCFD1-206ENST00000484733 CPP00450 1065 aa11.48□□□□□ -0.57
SCFD1-206ENST00000484733 RPLP0P05388 317 aaKnown RBP11.48□□□□□ -0.57
SCFD1-206ENST00000484733 CYP2A6P11509 494 aaPredicted RBP11.48□□□□□ -0.57
SCFD1-206ENST00000484733 SKILP12757 684 aa11.48□□□□□ -0.57
SCFD1-206ENST00000484733 UGT1A5P35504 534 aa11.48□□□□□ -0.57
SCFD1-206ENST00000484733 CFHR1Q03591 330 aa11.48□□□□□ -0.57
SCFD1-206ENST00000484733 ZFP36L1Q07352 338 aaKnown RBP11.48□□□□□ -0.57
SCFD1-206ENST00000484733 CLN3Q13286 438 aa11.48□□□□□ -0.57
SCFD1-206ENST00000484733 IQCB1Q15051 598 aa11.48□□□□□ -0.57
SCFD1-206ENST00000484733 ACOX1Q15067 660 aa11.48□□□□□ -0.57
SCFD1-206ENST00000484733 CNGA3Q16281 694 aa11.48□□□□□ -0.57
SCFD1-206ENST00000484733 CLPPQ16740 277 aaPredicted RBP11.48□□□□□ -0.57
SCFD1-206ENST00000484733 ARHGAP40Q5TG30 622 aa11.48□□□□□ -0.57
SCFD1-206ENST00000484733 HGSNATQ68CP4 663 aa11.48□□□□□ -0.57
SCFD1-206ENST00000484733 INO80CQ6PI98 192 aaPredicted RBP11.48□□□□□ -0.57
SCFD1-206ENST00000484733 RAB11FIP2Q7L804 512 aa11.48□□□□□ -0.57
SCFD1-206ENST00000484733 TAF8Q7Z7C8 310 aa11.48□□□□□ -0.57
SCFD1-206ENST00000484733 CCNJLQ8IV13 435 aa11.48□□□□□ -0.57
SCFD1-206ENST00000484733 ZNF843Q8N446 348 aa11.48□□□□□ -0.57
SCFD1-206ENST00000484733 GPBAR1Q8TDU6 330 aa11.48□□□□□ -0.57
SCFD1-206ENST00000484733 TTC9Q92623 222 aa11.48□□□□□ -0.57
SCFD1-206ENST00000484733 NUS1Q96E22 293 aa11.48□□□□□ -0.57
SCFD1-206ENST00000484733 CSPG4P5Q96PW8 444 aa11.48□□□□□ -0.57
SCFD1-206ENST00000484733 ETNK2Q9NVF9 386 aa11.48□□□□□ -0.57
SCFD1-206ENST00000484733 RCOR3Q9P2K3 495 aaPredicted RBP11.48□□□□□ -0.57
SCFD1-206ENST00000484733 PMS2P1A4D2B8 440 aa11.47□□□□□ -0.57
SCFD1-206ENST00000484733 RARAP10276 462 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms