RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 CATSPERZQ9NTU4 200 aa13.27□□□□□ -0.28
CPNE1-225ENST00000483495 KIAA1522Q9P206 1035 aaPredicted RBP13.27□□□□□ -0.28
CPNE1-225ENST00000483495 XPR1Q9UBH6 696 aa13.27□□□□□ -0.28
CPNE1-225ENST00000483495 LNPEPQ9UIQ6 1025 aa13.27□□□□□ -0.28
CPNE1-225ENST00000483495 BPTFQ12830 3046 aa13.27□□□□□ -0.28
CPNE1-225ENST00000483495 C2orf81A6NN90 581 aa13.27□□□□□ -0.29
CPNE1-225ENST00000483495 SOBPA7XYQ1 873 aa13.27□□□□□ -0.29
CPNE1-225ENST00000483495 C5orf67F2Z3F1 127 aa13.27□□□□□ -0.29
CPNE1-225ENST00000483495 FCHO1O14526 889 aa13.27□□□□□ -0.29
CPNE1-225ENST00000483495 ZNF195O14628 629 aa13.27□□□□□ -0.29
CPNE1-225ENST00000483495 DLX3O60479 287 aa13.27□□□□□ -0.29
CPNE1-225ENST00000483495 MOSPD3O75425 235 aa13.27□□□□□ -0.29
CPNE1-225ENST00000483495 CBX6O95503 412 aa13.27□□□□□ -0.29
CPNE1-225ENST00000483495 MT-CO1P00395 513 aa13.27□□□□□ -0.29
CPNE1-225ENST00000483495 EN2P19622 333 aaPredicted RBP13.27□□□□□ -0.29
CPNE1-225ENST00000483495 HOXA9P31269 272 aa13.27□□□□□ -0.29
CPNE1-225ENST00000483495 GLRBP48167 497 aa13.27□□□□□ -0.29
CPNE1-225ENST00000483495 CSNK1DP48730 415 aa13.27□□□□□ -0.29
CPNE1-225ENST00000483495 RASSF2P50749 326 aa13.27□□□□□ -0.29
CPNE1-225ENST00000483495 SUOXP51687 545 aa13.27□□□□□ -0.29
CPNE1-225ENST00000483495 KCNJ2P63252 427 aa13.27□□□□□ -0.29
CPNE1-225ENST00000483495 SEMA3AQ14563 771 aa13.27□□□□□ -0.29
CPNE1-225ENST00000483495 FAM83EQ2M2I3 478 aa13.27□□□□□ -0.29
CPNE1-225ENST00000483495 AFTPHQ6ULP2 937 aa13.27□□□□□ -0.29
CPNE1-225ENST00000483495 METTL3Q86U44 580 aaKnown RBP13.27□□□□□ -0.29
CPNE1-225ENST00000483495 LDB1Q86U70 411 aaPredicted RBP13.27□□□□□ -0.29
CPNE1-225ENST00000483495 ALYREFQ86V81 257 aaKnown RBP13.27□□□□□ -0.29
CPNE1-225ENST00000483495 OR4K2Q8NGD2 314 aa13.27□□□□□ -0.29
CPNE1-225ENST00000483495 PTCD3Q96EY7 689 aaKnown RBP13.27□□□□□ -0.29
CPNE1-225ENST00000483495 SCYL1Q96KG9 808 aa13.27□□□□□ -0.29
CPNE1-225ENST00000483495 TMEM237Q96Q45 408 aa13.27□□□□□ -0.29
CPNE1-225ENST00000483495 NMUR2Q9GZQ4 415 aa13.27□□□□□ -0.29
CPNE1-225ENST00000483495 DRC3Q9H069 523 aa13.27□□□□□ -0.29
CPNE1-225ENST00000483495 INTS10Q9NVR2 710 aaKnown RBP13.27□□□□□ -0.29
CPNE1-225ENST00000483495 HCFC1R1Q9NWW0 138 aa13.27□□□□□ -0.29
CPNE1-225ENST00000483495 DNAJC28Q9NX36 388 aa13.27□□□□□ -0.29
CPNE1-225ENST00000483495 HACD3Q9P035 362 aa13.27□□□□□ -0.29
CPNE1-225ENST00000483495 HAO1Q9UJM8 370 aa13.27□□□□□ -0.29
CPNE1-225ENST00000483495 TRIM33Q9UPN9 1127 aa13.27□□□□□ -0.29
CPNE1-225ENST00000483495 FCF1Q9Y324 198 aaKnown RBP13.27□□□□□ -0.29
CPNE1-225ENST00000483495 CCDC22O60826 627 aa13.26□□□□□ -0.29
CPNE1-225ENST00000483495 LTA4HP09960 611 aaKnown RBP13.26□□□□□ -0.29
CPNE1-225ENST00000483495 LPOP22079 712 aaPredicted RBP13.26□□□□□ -0.29
CPNE1-225ENST00000483495 FDXRP22570 491 aa13.26□□□□□ -0.29
CPNE1-225ENST00000483495 CDKN2DP55273 166 aa13.26□□□□□ -0.29
CPNE1-225ENST00000483495 ELF3P78545 371 aaPredicted RBP13.26□□□□□ -0.29
CPNE1-225ENST00000483495 LMAN2Q12907 356 aa13.26□□□□□ -0.29
CPNE1-225ENST00000483495 TUBB3Q13509 450 aa13.26□□□□□ -0.29
CPNE1-225ENST00000483495 TTC31Q49AM3 519 aaPredicted RBP13.26□□□□□ -0.29
CPNE1-225ENST00000483495 TECRLQ5HYJ1 363 aa13.26□□□□□ -0.29
CPNE1-225ENST00000483495 AGAP9Q5VTM2 703 aa13.26□□□□□ -0.29
CPNE1-225ENST00000483495 ZNF549Q6P9A3 640 aa13.26□□□□□ -0.29
CPNE1-225ENST00000483495 CYB5D1Q6P9G0 228 aa13.26□□□□□ -0.29
CPNE1-225ENST00000483495 MAVSQ7Z434 540 aa13.26□□□□□ -0.29
CPNE1-225ENST00000483495 SDCCAG8Q86SQ7 713 aaPredicted RBP13.26□□□□□ -0.29
CPNE1-225ENST00000483495 PACS2Q86VP3 889 aa13.26□□□□□ -0.29
CPNE1-225ENST00000483495 CMTM8Q8IZV2 173 aa13.26□□□□□ -0.29
CPNE1-225ENST00000483495 TTC30BQ8N4P2 665 aa13.26□□□□□ -0.29
CPNE1-225ENST00000483495 PNPLA1Q8N8W4 532 aa13.26□□□□□ -0.29
CPNE1-225ENST00000483495 SH3RF2Q8TEC5 729 aa13.26□□□□□ -0.29
CPNE1-225ENST00000483495 USP13Q92995 863 aaPredicted RBP13.26□□□□□ -0.29
CPNE1-225ENST00000483495 PRR11Q96HE9 360 aaPredicted RBP13.26□□□□□ -0.29
CPNE1-225ENST00000483495 TCF12Q99081 682 aa13.26□□□□□ -0.29
CPNE1-225ENST00000483495 POPDC3Q9HBV1 291 aa13.26□□□□□ -0.29
CPNE1-225ENST00000483495 GPAMQ9HCL2 828 aa13.26□□□□□ -0.29
CPNE1-225ENST00000483495 PNPOQ9NVS9 261 aa13.26□□□□□ -0.29
CPNE1-225ENST00000483495 CLEC4EQ9ULY5 219 aa13.26□□□□□ -0.29
CPNE1-225ENST00000483495 LINC01553A4QN01 128 aa13.25□□□□□ -0.29
CPNE1-225ENST00000483495 CAPN14A8MX76 684 aa13.25□□□□□ -0.29
CPNE1-225ENST00000483495 H7C0S8 307 aa13.25□□□□□ -0.29
CPNE1-225ENST00000483495 K7ERQ8 282 aa13.25□□□□□ -0.29
CPNE1-225ENST00000483495 MGRN1O60291 552 aa13.25□□□□□ -0.29
CPNE1-225ENST00000483495 HSPA4LO95757 839 aa13.25□□□□□ -0.29
CPNE1-225ENST00000483495 SERPINA6P08185 405 aa13.25□□□□□ -0.29
CPNE1-225ENST00000483495 PTPN2P17706 415 aa13.25□□□□□ -0.29
CPNE1-225ENST00000483495 HK2P52789 917 aa13.25□□□□□ -0.29
CPNE1-225ENST00000483495 DNAJB13P59910 316 aa13.25□□□□□ -0.29
CPNE1-225ENST00000483495 TIAL1Q01085 375 aaKnown RBP eCLIP13.25□□□□□ -0.291e-6■■■■■ 29.1
CPNE1-225ENST00000483495 SLC20A2Q08357 652 aa13.25□□□□□ -0.29
CPNE1-225ENST00000483495 ASPHQ12797 758 aa13.25□□□□□ -0.29
CPNE1-225ENST00000483495 CSHL1Q14406 222 aa13.25□□□□□ -0.29
CPNE1-225ENST00000483495 PLEKHG6Q3KR16 790 aa13.25□□□□□ -0.29
CPNE1-225ENST00000483495 GPR158Q5T848 1215 aa13.25□□□□□ -0.29
CPNE1-225ENST00000483495 TTC7BQ86TV6 843 aa13.25□□□□□ -0.29
CPNE1-225ENST00000483495 SPATA6LQ8N4H0 392 aa13.25□□□□□ -0.29
CPNE1-225ENST00000483495 KIF2BQ8N4N8 673 aa13.25□□□□□ -0.29
CPNE1-225ENST00000483495 BHMTQ93088 406 aa13.25□□□□□ -0.29
CPNE1-225ENST00000483495 TCEAL4Q96EI5 215 aa13.25□□□□□ -0.29
CPNE1-225ENST00000483495 EBF4Q9BQW3 602 aa13.25□□□□□ -0.29
CPNE1-225ENST00000483495 ABCB8Q9NUT2 735 aa13.25□□□□□ -0.29
CPNE1-225ENST00000483495 ARL8BQ9NVJ2 186 aa13.25□□□□□ -0.29
CPNE1-225ENST00000483495 SORCS3Q9UPU3 1222 aa13.25□□□□□ -0.29
CPNE1-225ENST00000483495 CYBBP04839 570 aa13.25□□□□□ -0.29
CPNE1-225ENST00000483495 RBP1P09455 135 aa13.25□□□□□ -0.29
CPNE1-225ENST00000483495 CCDC166P0CW27 439 aa13.25□□□□□ -0.29
CPNE1-225ENST00000483495 ATP5F1P24539 256 aaPredicted RBP13.25□□□□□ -0.29
CPNE1-225ENST00000483495 SLC8A1P32418 973 aa13.25□□□□□ -0.29
CPNE1-225ENST00000483495 CD70P32970 193 aa13.25□□□□□ -0.29
CPNE1-225ENST00000483495 MAPK8P45983 427 aa13.25□□□□□ -0.29
CPNE1-225ENST00000483495 GRIA4P48058 902 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms