RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 TDRD1Q9BXT4 1180 aaKnown RBP10.64□□□□□ -0.71
SSBP1-210ENST00000481508 GLOD4Q9HC38 313 aa10.64□□□□□ -0.71
SSBP1-210ENST00000481508 B4GALT6Q9UBX8 382 aa10.64□□□□□ -0.71
SSBP1-210ENST00000481508 SLC6A14Q9UN76 642 aa10.64□□□□□ -0.71
SSBP1-210ENST00000481508 CHKBQ9Y259 395 aa10.64□□□□□ -0.71
SSBP1-210ENST00000481508 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.64□□□□□ -0.71
SSBP1-210ENST00000481508 CFAP46Q8IYW2 2715 aa10.63□□□□□ -0.71
SSBP1-210ENST00000481508 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.63□□□□□ -0.71
SSBP1-210ENST00000481508 NPIPB15A6NHN6 443 aaPredicted RBP10.63□□□□□ -0.71
SSBP1-210ENST00000481508 GOLGA8CPA6NN73 597 aa10.63□□□□□ -0.71
SSBP1-210ENST00000481508 HACD1B0YJ81 288 aa10.63□□□□□ -0.71
SSBP1-210ENST00000481508 NEMP1O14524 444 aa10.63□□□□□ -0.71
SSBP1-210ENST00000481508 TSPAN6O43657 245 aa10.63□□□□□ -0.71
SSBP1-210ENST00000481508 TJP3O95049 919 aa10.63□□□□□ -0.71
SSBP1-210ENST00000481508 KCNK5O95279 499 aa10.63□□□□□ -0.71
SSBP1-210ENST00000481508 PAK4O96013 591 aaPredicted RBP10.63□□□□□ -0.71
SSBP1-210ENST00000481508 MT-CYBP00156 380 aaPredicted RBP10.63□□□□□ -0.71
SSBP1-210ENST00000481508 RBP3P10745 1247 aa10.63□□□□□ -0.71
SSBP1-210ENST00000481508 C6P13671 934 aa10.63□□□□□ -0.71
SSBP1-210ENST00000481508 NFKB1P19838 968 aa10.63□□□□□ -0.71
SSBP1-210ENST00000481508 CXCR5P32302 372 aa10.63□□□□□ -0.71
SSBP1-210ENST00000481508 IGFALSP35858 605 aa10.63□□□□□ -0.71
SSBP1-210ENST00000481508 MAPK8P45983 427 aa10.63□□□□□ -0.71
SSBP1-210ENST00000481508 RPS21P63220 83 aaKnown RBP10.63□□□□□ -0.71
SSBP1-210ENST00000481508 FAM193AP78312 1265 aa10.63□□□□□ -0.71
SSBP1-210ENST00000481508 CCDC173Q0VFZ6 552 aa10.63□□□□□ -0.71
SSBP1-210ENST00000481508 XRCC4Q13426 336 aa10.63□□□□□ -0.71
SSBP1-210ENST00000481508 KIF19Q2TAC6 998 aa10.63□□□□□ -0.71
SSBP1-210ENST00000481508 RALGPS1Q5JS13 557 aa10.63□□□□□ -0.71
SSBP1-210ENST00000481508 TPRG1LQ5T0D9 272 aa10.63□□□□□ -0.71
SSBP1-210ENST00000481508 CCDC181Q5TID7 509 aa10.63□□□□□ -0.71
SSBP1-210ENST00000481508 NAPEPLDQ6IQ20 393 aa10.63□□□□□ -0.71
SSBP1-210ENST00000481508 KIAA1161Q6NSJ0 714 aa10.63□□□□□ -0.71
SSBP1-210ENST00000481508 NEK5Q6P3R8 708 aa10.63□□□□□ -0.71
SSBP1-210ENST00000481508 RFLNAQ6ZTI6 216 aa10.63□□□□□ -0.71
SSBP1-210ENST00000481508 NYAP1Q6ZVC0 841 aa10.63□□□□□ -0.71
SSBP1-210ENST00000481508 DPPA4Q7L190 304 aa10.63□□□□□ -0.71
SSBP1-210ENST00000481508 TSPAN33Q86UF1 283 aa10.63□□□□□ -0.71
SSBP1-210ENST00000481508 SPATS2Q86XZ4 545 aaKnown RBP10.63□□□□□ -0.71
SSBP1-210ENST00000481508 SLC13A5Q86YT5 568 aaPredicted RBP10.63□□□□□ -0.71
SSBP1-210ENST00000481508 PELI3Q8N2H9 469 aa10.63□□□□□ -0.71
SSBP1-210ENST00000481508 C12orf50Q8NA57 414 aaPredicted RBP10.63□□□□□ -0.71
SSBP1-210ENST00000481508 LPCAT1Q8NF37 534 aa10.63□□□□□ -0.71
SSBP1-210ENST00000481508 SLC35B2Q8TB61 432 aa10.63□□□□□ -0.71
SSBP1-210ENST00000481508 HCAR2Q8TDS4 363 aa10.63□□□□□ -0.71
SSBP1-210ENST00000481508 HTR3CQ8WXA8 447 aa10.63□□□□□ -0.71
SSBP1-210ENST00000481508 GATA6Q92908 595 aa10.63□□□□□ -0.71
SSBP1-210ENST00000481508 OXNAD1Q96HP4 312 aaPredicted RBP10.63□□□□□ -0.71
SSBP1-210ENST00000481508 TEKT5Q96M29 485 aa10.63□□□□□ -0.71
SSBP1-210ENST00000481508 ALS2CR12Q96Q35 445 aa10.63□□□□□ -0.71
SSBP1-210ENST00000481508 GTPBP2Q9BX10 602 aaKnown RBP10.63□□□□□ -0.71
SSBP1-210ENST00000481508 SLC17A9Q9BYT1 436 aa10.63□□□□□ -0.71
SSBP1-210ENST00000481508 USP29Q9HBJ7 922 aa10.63□□□□□ -0.71
SSBP1-210ENST00000481508 MBNL1Q9NR56 388 aaKnown RBP10.63□□□□□ -0.71
SSBP1-210ENST00000481508 AASDHPPTQ9NRN7 309 aa10.63□□□□□ -0.71
SSBP1-210ENST00000481508 SMARCAL1Q9NZC9 954 aa10.63□□□□□ -0.71
SSBP1-210ENST00000481508 UBP1Q9NZI7 540 aa10.63□□□□□ -0.71
SSBP1-210ENST00000481508 SUSD2Q9UGT4 822 aa10.63□□□□□ -0.71
SSBP1-210ENST00000481508 AMACRQ9UHK6 382 aa10.63□□□□□ -0.71
SSBP1-210ENST00000481508 SNX11Q9Y5W9 270 aa10.63□□□□□ -0.71
SSBP1-210ENST00000481508 PCNX2A6NKB5 2137 aa10.63□□□□□ -0.71
SSBP1-210ENST00000481508 CABIN1Q9Y6J0 2220 aa10.62□□□□□ -0.71
SSBP1-210ENST00000481508 POM121BA6NF01 834 aa10.62□□□□□ -0.71
SSBP1-210ENST00000481508 FANCGO15287 622 aa10.62□□□□□ -0.71
SSBP1-210ENST00000481508 NEBLO76041 1014 aa10.62□□□□□ -0.71
SSBP1-210ENST00000481508 ATP1A1P05023 1023 aaKnown RBP10.62□□□□□ -0.71
SSBP1-210ENST00000481508 GNSP15586 552 aa10.62□□□□□ -0.71
SSBP1-210ENST00000481508 XPAP23025 273 aaPredicted RBP10.62□□□□□ -0.71
SSBP1-210ENST00000481508 DPP6P42658 865 aa10.62□□□□□ -0.71
SSBP1-210ENST00000481508 GRIA4P48058 902 aa10.62□□□□□ -0.71
SSBP1-210ENST00000481508 LIG3P49916 1009 aa10.62□□□□□ -0.71
SSBP1-210ENST00000481508 GDF10P55107 478 aa10.62□□□□□ -0.71
SSBP1-210ENST00000481508 RACK1P63244 317 aaKnown RBP10.62□□□□□ -0.71
SSBP1-210ENST00000481508 CCDC15Q0P6D6 951 aa10.62□□□□□ -0.71
SSBP1-210ENST00000481508 GALNT3Q14435 633 aa10.62□□□□□ -0.71
SSBP1-210ENST00000481508 IRF4Q15306 451 aa10.62□□□□□ -0.71
SSBP1-210ENST00000481508 SHBQ15464 509 aa10.62□□□□□ -0.71
SSBP1-210ENST00000481508 CNGA3Q16281 694 aa10.62□□□□□ -0.71
SSBP1-210ENST00000481508 QPCTQ16769 361 aa10.62□□□□□ -0.71
SSBP1-210ENST00000481508 SETMARQ53H47 684 aaPredicted RBP10.62□□□□□ -0.71
SSBP1-210ENST00000481508 ZNF569Q5MCW4 686 aa10.62□□□□□ -0.71
SSBP1-210ENST00000481508 PRAMEF14Q5SWL7 426 aa10.62□□□□□ -0.71
SSBP1-210ENST00000481508 CFAP58Q5T655 872 aa10.62□□□□□ -0.71
SSBP1-210ENST00000481508 ARMC12Q5T9G4 340 aa10.62□□□□□ -0.71
SSBP1-210ENST00000481508 SEL1L2Q5TEA6 688 aa10.62□□□□□ -0.71
SSBP1-210ENST00000481508 STPG1Q5TH74 334 aa10.62□□□□□ -0.71
SSBP1-210ENST00000481508 DARS2Q6PI48 645 aaKnown RBP10.62□□□□□ -0.71
SSBP1-210ENST00000481508 KDELC1Q6UW63 502 aa10.62□□□□□ -0.71
SSBP1-210ENST00000481508 BZW1Q7L1Q6 419 aaKnown RBP10.62□□□□□ -0.71
SSBP1-210ENST00000481508 KDELC2Q7Z4H8 507 aa10.62□□□□□ -0.71
SSBP1-210ENST00000481508 PRUNE1Q86TP1 453 aa10.62□□□□□ -0.71
SSBP1-210ENST00000481508 CDKL3Q8IVW4 592 aaPredicted RBP10.62□□□□□ -0.71
SSBP1-210ENST00000481508 TP53I13Q8NBR0 393 aaPredicted RBP10.62□□□□□ -0.71
SSBP1-210ENST00000481508 TRIM58Q8NG06 486 aa10.62□□□□□ -0.71
SSBP1-210ENST00000481508 OR13H1Q8NG92 308 aa10.62□□□□□ -0.71
SSBP1-210ENST00000481508 CEP76Q8TAP6 659 aa10.62□□□□□ -0.71
SSBP1-210ENST00000481508 CCDC110Q8TBZ0 833 aa10.62□□□□□ -0.71
SSBP1-210ENST00000481508 CXorf40AQ8TE69 158 aa10.62□□□□□ -0.71
SSBP1-210ENST00000481508 C1orf54Q8WWF1 131 aa10.62□□□□□ -0.71
SSBP1-210ENST00000481508 FUBP1Q96AE4 644 aaKnown RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms