RNA–Protein interactions for RNA: ENST00000481154.1

PTPN12-211, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 3

Gene PTPN12, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-211	ENST00000481154	SGO1	Q5FBB7	561 aa		5	□□□□□ -1.61
PTPN12-211	ENST00000481154	CCDC30	Q5VVM6	783 aa		5	□□□□□ -1.61
PTPN12-211	ENST00000481154	C8orf82	Q6P1X6	216 aa	Predicted RBP	5	□□□□□ -1.61
PTPN12-211	ENST00000481154	NR2C2AP	Q86WQ0	139 aa		5	□□□□□ -1.61
PTPN12-211	ENST00000481154	SLC35F3	Q8IY50	421 aa		5	□□□□□ -1.61
PTPN12-211	ENST00000481154	NEXN-AS1	Q8NBZ9	246 aa		5	□□□□□ -1.61
PTPN12-211	ENST00000481154	BEST2	Q8NFU1	509 aa		5	□□□□□ -1.61
PTPN12-211	ENST00000481154	LMO3	Q8TAP4	145 aa		5	□□□□□ -1.61
PTPN12-211	ENST00000481154	GTF3C6	Q969F1	213 aa		5	□□□□□ -1.61
PTPN12-211	ENST00000481154	ERGIC1	Q969X5	290 aa		5	□□□□□ -1.61
PTPN12-211	ENST00000481154	INTS12	Q96CB8	462 aa	Known RBP	5	□□□□□ -1.61
PTPN12-211	ENST00000481154	TKTL2	Q9H0I9	626 aa		5	□□□□□ -1.61
PTPN12-211	ENST00000481154	SLC6A13	Q9NSD5	602 aa		5	□□□□□ -1.61
PTPN12-211	ENST00000481154	HAO1	Q9UJM8	370 aa		5	□□□□□ -1.61
PTPN12-211	ENST00000481154	PIAS3	Q9Y6X2	628 aa		5	□□□□□ -1.61
PTPN12-211	ENST00000481154	UTY	O14607	1347 aa		4.99	□□□□□ -1.61
PTPN12-211	ENST00000481154	TAF1	P21675	1872 aa		4.99	□□□□□ -1.61
PTPN12-211	ENST00000481154		A0A1B0GVM2	712 aa		4.99	□□□□□ -1.61
PTPN12-211	ENST00000481154	EIF3CL	B5ME19	914 aa	Known RBP	4.99	□□□□□ -1.61
PTPN12-211	ENST00000481154		J3KR12	359 aa		4.99	□□□□□ -1.61
PTPN12-211	ENST00000481154	USO1	O60763	962 aa	Known RBP	4.99	□□□□□ -1.61
PTPN12-211	ENST00000481154	CCNDBP1	O95273	360 aa		4.99	□□□□□ -1.61
PTPN12-211	ENST00000481154	VNN2	O95498	520 aa		4.99	□□□□□ -1.61
PTPN12-211	ENST00000481154	GLUD1	P00367	558 aa		4.99	□□□□□ -1.61
PTPN12-211	ENST00000481154	PIGA	P37287	484 aa		4.99	□□□□□ -1.61
PTPN12-211	ENST00000481154	GLUD2	P49448	558 aa		4.99	□□□□□ -1.61
PTPN12-211	ENST00000481154	RRP1	P56182	461 aa	Known RBP	4.99	□□□□□ -1.61
PTPN12-211	ENST00000481154	DCAF7	P61962	342 aa		4.99	□□□□□ -1.61
PTPN12-211	ENST00000481154	TRAF2	Q12933	501 aa		4.99	□□□□□ -1.61
PTPN12-211	ENST00000481154	IZUMO4	Q1ZYL8	232 aa		4.99	□□□□□ -1.61
PTPN12-211	ENST00000481154	LCE1E	Q5T753	118 aa		4.99	□□□□□ -1.61
PTPN12-211	ENST00000481154	FBXO46	Q6PJ61	603 aa	Predicted RBP	4.99	□□□□□ -1.61
PTPN12-211	ENST00000481154	CCDC129	Q6ZRS4	1044 aa		4.99	□□□□□ -1.61
PTPN12-211	ENST00000481154		Q6ZTC4	211 aa		4.99	□□□□□ -1.61
PTPN12-211	ENST00000481154	LINGO2	Q7L985	606 aa		4.99	□□□□□ -1.61
PTPN12-211	ENST00000481154	PXK	Q7Z7A4	578 aa		4.99	□□□□□ -1.61
PTPN12-211	ENST00000481154	AADAT	Q8N5Z0	425 aa		4.99	□□□□□ -1.61
PTPN12-211	ENST00000481154	ANKRD52	Q8NB46	1076 aa		4.99	□□□□□ -1.61
PTPN12-211	ENST00000481154	PSPC1	Q8WXF1	523 aa	Known RBP	4.99	□□□□□ -1.61
PTPN12-211	ENST00000481154	SMARCE1	Q969G3	411 aa		4.99	□□□□□ -1.61
PTPN12-211	ENST00000481154	FAM149B1	Q96BN6	582 aa		4.99	□□□□□ -1.61
PTPN12-211	ENST00000481154	PERP	Q96FX8	193 aa		4.99	□□□□□ -1.61
PTPN12-211	ENST00000481154	ZNF570	Q96NI8	536 aa		4.99	□□□□□ -1.61
PTPN12-211	ENST00000481154	STRA6	Q9BX79	667 aa		4.99	□□□□□ -1.61
PTPN12-211	ENST00000481154	SCPEP1	Q9HB40	452 aa		4.99	□□□□□ -1.61
PTPN12-211	ENST00000481154	ASAH2	Q9NR71	780 aa		4.99	□□□□□ -1.61
PTPN12-211	ENST00000481154	LIMA1	Q9UHB6	759 aa	Known RBP	4.99	□□□□□ -1.61
PTPN12-211	ENST00000481154	PNMA2	Q9UL42	364 aa		4.99	□□□□□ -1.61
PTPN12-211	ENST00000481154	SLC45A1	Q9Y2W3	748 aa		4.99	□□□□□ -1.61
PTPN12-211	ENST00000481154	AAR2	Q9Y312	384 aa	Known RBP	4.99	□□□□□ -1.61
PTPN12-211	ENST00000481154	CLEC18A	A5D8T8	446 aa		4.98	□□□□□ -1.61
PTPN12-211	ENST00000481154	PGPEP1L	A6NFU8	196 aa		4.98	□□□□□ -1.61
PTPN12-211	ENST00000481154	PAGE4	O60829	102 aa		4.98	□□□□□ -1.61
PTPN12-211	ENST00000481154	CD58	P19256	250 aa		4.98	□□□□□ -1.61
PTPN12-211	ENST00000481154	GPT	P24298	496 aa		4.98	□□□□□ -1.61
PTPN12-211	ENST00000481154	ITGB8	P26012	769 aa		4.98	□□□□□ -1.61
PTPN12-211	ENST00000481154	RPL3	P39023	403 aa	Known RBP	4.98	□□□□□ -1.61
PTPN12-211	ENST00000481154	PBX3	P40426	434 aa		4.98	□□□□□ -1.61
PTPN12-211	ENST00000481154	PIP4K2A	P48426	406 aa	Predicted RBP	4.98	□□□□□ -1.61
PTPN12-211	ENST00000481154	MXI1	P50539	228 aa		4.98	□□□□□ -1.61
PTPN12-211	ENST00000481154	MAPRE1	Q15691	268 aa	Known RBP	4.98	□□□□□ -1.61
PTPN12-211	ENST00000481154	COL28A1	Q2UY09	1125 aa		4.98	□□□□□ -1.61
PTPN12-211	ENST00000481154	DPCR1	Q3MIW9	517 aa		4.98	□□□□□ -1.61
PTPN12-211	ENST00000481154	TDRD12	Q587J7	1177 aa	Known RBP	4.98	□□□□□ -1.61
PTPN12-211	ENST00000481154	KLHL24	Q6TFL4	600 aa		4.98	□□□□□ -1.61
PTPN12-211	ENST00000481154	SHF	Q7M4L6	423 aa		4.98	□□□□□ -1.61
PTPN12-211	ENST00000481154	ADSSL1	Q8N142	457 aa		4.98	□□□□□ -1.61
PTPN12-211	ENST00000481154	ZBTB2	Q8N680	514 aa		4.98	□□□□□ -1.61
PTPN12-211	ENST00000481154	SCCPDH	Q8NBX0	429 aa		4.98	□□□□□ -1.61
PTPN12-211	ENST00000481154	CLEC18C	Q8NCF0	446 aa		4.98	□□□□□ -1.61
PTPN12-211	ENST00000481154	OR14A16	Q8NHC5	309 aa		4.98	□□□□□ -1.61
PTPN12-211	ENST00000481154	HUS1B	Q8NHY5	278 aa		4.98	□□□□□ -1.61
PTPN12-211	ENST00000481154	NEK9	Q8TD19	979 aa		4.98	□□□□□ -1.61
PTPN12-211	ENST00000481154	SLITRK1	Q96PX8	696 aa		4.98	□□□□□ -1.61
PTPN12-211	ENST00000481154	MAP7D2	Q96T17	732 aa		4.98	□□□□□ -1.61
PTPN12-211	ENST00000481154	TM6SF1	Q9BZW5	370 aa		4.98	□□□□□ -1.61
PTPN12-211	ENST00000481154	C6orf106	Q9H6K1	298 aa	Predicted RBP	4.98	□□□□□ -1.61
PTPN12-211	ENST00000481154	KIF9	Q9HAQ2	790 aa		4.98	□□□□□ -1.61
PTPN12-211	ENST00000481154	KRT84	Q9NSB2	600 aa		4.98	□□□□□ -1.61
PTPN12-211	ENST00000481154	DIAPH3	Q9NSV4	1193 aa		4.98	□□□□□ -1.61
PTPN12-211	ENST00000481154	PAM16	Q9Y3D7	125 aa		4.98	□□□□□ -1.61
PTPN12-211	ENST00000481154	PCDHGB1	Q9Y5G3	927 aa		4.98	□□□□□ -1.61
PTPN12-211	ENST00000481154	PSAT1	Q9Y617	370 aa		4.98	□□□□□ -1.61
PTPN12-211	ENST00000481154	KCNE2	Q9Y6J6	123 aa		4.98	□□□□□ -1.61
PTPN12-211	ENST00000481154	DYTN	A2CJ06	578 aa		4.97	□□□□□ -1.61
PTPN12-211	ENST00000481154	PI4KAP2	A4QPH2	592 aa		4.97	□□□□□ -1.61
PTPN12-211	ENST00000481154	WNT9B	O14905	357 aa		4.97	□□□□□ -1.61
PTPN12-211	ENST00000481154	DDX58	O95786	925 aa	Known RBP	4.97	□□□□□ -1.61
PTPN12-211	ENST00000481154	SCGB1D1	O95968	90 aa		4.97	□□□□□ -1.61
PTPN12-211	ENST00000481154	PRSS2	P07478	247 aa		4.97	□□□□□ -1.61
PTPN12-211	ENST00000481154	SET	Q01105	290 aa	Predicted RBP	4.97	□□□□□ -1.61
PTPN12-211	ENST00000481154	FRG1	Q14331	258 aa	Known RBP	4.97	□□□□□ -1.61
PTPN12-211	ENST00000481154	NEDD9	Q14511	834 aa		4.97	□□□□□ -1.61
PTPN12-211	ENST00000481154	RALBP1	Q15311	655 aa		4.97	□□□□□ -1.61
PTPN12-211	ENST00000481154	MMEL1	Q495T6	779 aa		4.97	□□□□□ -1.61
PTPN12-211	ENST00000481154	GPATCH4	Q5T3I0	446 aa	Known RBP	4.97	□□□□□ -1.61
PTPN12-211	ENST00000481154	SNX30	Q5VWJ9	437 aa		4.97	□□□□□ -1.61
PTPN12-211	ENST00000481154	TYW3	Q6IPR3	259 aa	Known RBP	4.97	□□□□□ -1.61
PTPN12-211	ENST00000481154	TSSK4	Q6SA08	328 aa		4.97	□□□□□ -1.61
PTPN12-211	ENST00000481154	PRSS57	Q6UWY2	283 aa		4.97	□□□□□ -1.61

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