RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 GFM1Q96RP9 751 aaKnown RBP15.3■□□□□ 0.04
LIMS3-203ENST00000480744 RBM15Q96T37 977 aaKnown RBP eCLIP15.3■□□□□ 0.04
LIMS3-203ENST00000480744 ISCUQ9H1K1 167 aa15.3■□□□□ 0.04
LIMS3-203ENST00000480744 SUDS3Q9H7L9 328 aaPredicted RBP15.3■□□□□ 0.04
LIMS3-203ENST00000480744 FGF22Q9HCT0 170 aa15.3■□□□□ 0.04
LIMS3-203ENST00000480744 ETNK2Q9NVF9 386 aa15.3■□□□□ 0.04
LIMS3-203ENST00000480744 WDR70Q9NW82 654 aa15.3■□□□□ 0.04
LIMS3-203ENST00000480744 RABGEF1Q9UJ41 708 aa15.3■□□□□ 0.04
LIMS3-203ENST00000480744 PCDHGC4Q9Y5F7 938 aa15.3■□□□□ 0.04
LIMS3-203ENST00000480744 CCDC187A0A096LP49 1063 aa15.29■□□□□ 0.04
LIMS3-203ENST00000480744 SYCE3A1L190 88 aa15.29■□□□□ 0.04
LIMS3-203ENST00000480744 TNFSF15O95150 251 aa15.29■□□□□ 0.04
LIMS3-203ENST00000480744 CPP00450 1065 aa15.29■□□□□ 0.04
LIMS3-203ENST00000480744 PDX1P52945 283 aa15.29■□□□□ 0.04
LIMS3-203ENST00000480744 UCNP55089 124 aa15.29■□□□□ 0.04
LIMS3-203ENST00000480744 CCL7P80098 99 aa15.29■□□□□ 0.04
LIMS3-203ENST00000480744 NR1I3Q14994 352 aa15.29■□□□□ 0.04
LIMS3-203ENST00000480744 DPYSL2Q16555 572 aa15.29■□□□□ 0.04
LIMS3-203ENST00000480744 BOLA3Q53S33 107 aa15.29■□□□□ 0.04
LIMS3-203ENST00000480744 ARHGAP40Q5TG30 622 aa15.29■□□□□ 0.04
LIMS3-203ENST00000480744 POLNQ7Z5Q5 900 aa15.29■□□□□ 0.04
LIMS3-203ENST00000480744 B3GNT8Q7Z7M8 397 aa15.29■□□□□ 0.04
LIMS3-203ENST00000480744 BBS5Q8N3I7 341 aa15.29■□□□□ 0.04
LIMS3-203ENST00000480744 ARL14Q8N4G2 192 aa15.29■□□□□ 0.04
LIMS3-203ENST00000480744 ATPAF2Q8N5M1 289 aa15.29■□□□□ 0.04
LIMS3-203ENST00000480744 Q8N9G6 341 aaPredicted RBP15.29■□□□□ 0.04
LIMS3-203ENST00000480744 FAM46DQ8NEK8 389 aa15.29■□□□□ 0.04
LIMS3-203ENST00000480744 NSMCE1Q8WV22 266 aa15.29■□□□□ 0.04
LIMS3-203ENST00000480744 NUS1Q96E22 293 aa15.29■□□□□ 0.04
LIMS3-203ENST00000480744 CSPG4P5Q96PW8 444 aa15.29■□□□□ 0.04
LIMS3-203ENST00000480744 WDR26Q9H7D7 661 aa15.29■□□□□ 0.04
LIMS3-203ENST00000480744 CYP4F12Q9HCS2 524 aa15.29■□□□□ 0.04
LIMS3-203ENST00000480744 PCDHGA8Q9Y5G5 932 aa15.29■□□□□ 0.04
LIMS3-203ENST00000480744 DGKBQ9Y6T7 804 aa15.29■□□□□ 0.04
LIMS3-203ENST00000480744 SCN8AQ9UQD0 1980 aa15.29■□□□□ 0.04
LIMS3-203ENST00000480744 GOLGA6CA6NDK9 693 aa15.28■□□□□ 0.04
LIMS3-203ENST00000480744 GOLGA6BA6NDN3 693 aa15.28■□□□□ 0.04
LIMS3-203ENST00000480744 B4DGG1 531 aa15.28■□□□□ 0.04
LIMS3-203ENST00000480744 NTN3O00634 580 aaPredicted RBP15.28■□□□□ 0.04
LIMS3-203ENST00000480744 GOLGA6DP0CG33 693 aa15.28■□□□□ 0.04
LIMS3-203ENST00000480744 RARAP10276 462 aa15.28■□□□□ 0.04
LIMS3-203ENST00000480744 GM2AP17900 193 aa15.28■□□□□ 0.04
LIMS3-203ENST00000480744 HSPA9P38646 679 aaKnown RBP15.28■□□□□ 0.04
LIMS3-203ENST00000480744 SSR1P43307 286 aaKnown RBP15.28■□□□□ 0.04
LIMS3-203ENST00000480744 MAXP61244 160 aa15.28■□□□□ 0.04
LIMS3-203ENST00000480744 TPM4P67936 248 aa15.28■□□□□ 0.04
LIMS3-203ENST00000480744 C19orf57Q0VDD7 668 aa15.28■□□□□ 0.04
LIMS3-203ENST00000480744 PIGHQ14442 188 aaPredicted RBP15.28■□□□□ 0.04
LIMS3-203ENST00000480744 KRT81Q14533 505 aa15.28■□□□□ 0.04
LIMS3-203ENST00000480744 IQCB1Q15051 598 aa15.28■□□□□ 0.04
LIMS3-203ENST00000480744 TXNRD3NBQ6F5E7 133 aa15.28■□□□□ 0.04
LIMS3-203ENST00000480744 PNCKQ6P2M8 343 aa15.28■□□□□ 0.04
LIMS3-203ENST00000480744 IGF2-ASQ6U949 168 aa15.28■□□□□ 0.04
LIMS3-203ENST00000480744 PELI3Q8N2H9 469 aa15.28■□□□□ 0.04
LIMS3-203ENST00000480744 PGBD5Q8N414 524 aa15.28■□□□□ 0.04
LIMS3-203ENST00000480744 PRR11Q96HE9 360 aaPredicted RBP15.28■□□□□ 0.04
LIMS3-203ENST00000480744 BTBD6Q96KE9 485 aa15.28■□□□□ 0.04
LIMS3-203ENST00000480744 NUDCD1Q96RS6 583 aa15.28■□□□□ 0.04
LIMS3-203ENST00000480744 LGR4Q9BXB1 951 aa15.28■□□□□ 0.04
LIMS3-203ENST00000480744 DPH1Q9BZG8 443 aa15.28■□□□□ 0.04
LIMS3-203ENST00000480744 FOXP3Q9BZS1 431 aa15.28■□□□□ 0.04
LIMS3-203ENST00000480744 TMEM168Q9H0V1 697 aa15.28■□□□□ 0.04
LIMS3-203ENST00000480744 THAP2Q9H0W7 228 aa15.28■□□□□ 0.04
LIMS3-203ENST00000480744 GOLGA6AQ9NYA3 693 aa15.28■□□□□ 0.04
LIMS3-203ENST00000480744 ANAPC7Q9UJX3 599 aa15.28■□□□□ 0.04
LIMS3-203ENST00000480744 GCN1Q92616 2671 aaKnown RBP15.28■□□□□ 0.04
LIMS3-203ENST00000480744 D6RAR5 112 aa15.27■□□□□ 0.04
LIMS3-203ENST00000480744 TK2O00142 265 aa15.27■□□□□ 0.04
LIMS3-203ENST00000480744 AGRPO00253 132 aa15.27■□□□□ 0.04
LIMS3-203ENST00000480744 SOCS5O75159 536 aa15.27■□□□□ 0.04
LIMS3-203ENST00000480744 PTMSP20962 102 aa15.27■□□□□ 0.04
LIMS3-203ENST00000480744 NFKBIAP25963 317 aa15.27■□□□□ 0.04
LIMS3-203ENST00000480744 VIPR1P32241 457 aa15.27■□□□□ 0.04
LIMS3-203ENST00000480744 SERPINB6P35237 376 aa15.27■□□□□ 0.04
LIMS3-203ENST00000480744 MMP13P45452 471 aa15.27■□□□□ 0.04
LIMS3-203ENST00000480744 NFKBIBQ15653 356 aa15.27■□□□□ 0.04
LIMS3-203ENST00000480744 CNGA3Q16281 694 aa15.27■□□□□ 0.04
LIMS3-203ENST00000480744 TAF1BQ53T94 588 aaPredicted RBP15.27■□□□□ 0.04
LIMS3-203ENST00000480744 FIGNQ5HY92 759 aa15.27■□□□□ 0.04
LIMS3-203ENST00000480744 HGSNATQ68CP4 663 aa15.27■□□□□ 0.04
LIMS3-203ENST00000480744 JAMLQ86YT9 394 aa15.27■□□□□ 0.04
LIMS3-203ENST00000480744 CCNJLQ8IV13 435 aa15.27■□□□□ 0.04
LIMS3-203ENST00000480744 SFTPA2Q8IWL1 248 aa15.27■□□□□ 0.04
LIMS3-203ENST00000480744 FBXO39Q8N4B4 442 aa15.27■□□□□ 0.04
LIMS3-203ENST00000480744 OR6C4Q8NGE1 309 aa15.27■□□□□ 0.04
LIMS3-203ENST00000480744 CCL4L1Q8NHW4 92 aa15.27■□□□□ 0.04
LIMS3-203ENST00000480744 CPLX3Q8WVH0 158 aa15.27■□□□□ 0.04
LIMS3-203ENST00000480744 CCDC97Q96F63 343 aaPredicted RBP15.27■□□□□ 0.04
LIMS3-203ENST00000480744 COQ10AQ96MF6 247 aa15.27■□□□□ 0.04
LIMS3-203ENST00000480744 NUP85Q9BW27 656 aa15.27■□□□□ 0.04
LIMS3-203ENST00000480744 STRADBQ9C0K7 418 aa15.27■□□□□ 0.04
LIMS3-203ENST00000480744 LRRN3Q9H3W5 708 aa15.27■□□□□ 0.04
LIMS3-203ENST00000480744 DPEP2Q9H4A9 486 aa15.27■□□□□ 0.04
LIMS3-203ENST00000480744 NOD2Q9HC29 1040 aa15.27■□□□□ 0.04
LIMS3-203ENST00000480744 PCDH18Q9HCL0 1135 aa15.27■□□□□ 0.04
LIMS3-203ENST00000480744 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.27■□□□□ 0.04
LIMS3-203ENST00000480744 IP6K2Q9UHH9 426 aa15.27■□□□□ 0.04
LIMS3-203ENST00000480744 ZFC3H1O60293 1989 aaKnown RBP15.27■□□□□ 0.03
LIMS3-203ENST00000480744 MGAQ8IWI9 3026 aa15.27■□□□□ 0.03
LIMS3-203ENST00000480744 A0A1W2PQ67 120 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms