RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 IGF2RP11717 2491 aa11.49□□□□□ -0.57
CCM2-213ENST00000480658 MATN3O15232 486 aa11.48□□□□□ -0.57
CCM2-213ENST00000480658 YY2O15391 372 aa11.48□□□□□ -0.57
CCM2-213ENST00000480658 BUB1BO60566 1050 aaPredicted RBP11.48□□□□□ -0.57
CCM2-213ENST00000480658 PGLSO95336 258 aa11.48□□□□□ -0.57
CCM2-213ENST00000480658 AMPD1P23109 780 aa11.48□□□□□ -0.57
CCM2-213ENST00000480658 TRIM23P36406 574 aa11.48□□□□□ -0.57
CCM2-213ENST00000480658 LSSP48449 732 aa11.48□□□□□ -0.57
CCM2-213ENST00000480658 EPHB1P54762 984 aa11.48□□□□□ -0.57
CCM2-213ENST00000480658 DPTQ07507 201 aa11.48□□□□□ -0.57
CCM2-213ENST00000480658 SPIDRQ14159 915 aa11.48□□□□□ -0.57
CCM2-213ENST00000480658 DPYSL3Q14195 570 aa11.48□□□□□ -0.57
CCM2-213ENST00000480658 CDKN3Q16667 212 aa11.48□□□□□ -0.57
CCM2-213ENST00000480658 CLPPQ16740 277 aaPredicted RBP11.48□□□□□ -0.57
CCM2-213ENST00000480658 TBC1D25Q3MII6 688 aa11.48□□□□□ -0.57
CCM2-213ENST00000480658 ANKRD20A8PQ5CZ79 823 aa11.48□□□□□ -0.57
CCM2-213ENST00000480658 LRRC38Q5VT99 294 aa11.48□□□□□ -0.57
CCM2-213ENST00000480658 EFL1Q7Z2Z2 1120 aaKnown RBP11.48□□□□□ -0.57
CCM2-213ENST00000480658 HID1Q8IV36 788 aa11.48□□□□□ -0.57
CCM2-213ENST00000480658 ZNF248Q8NDW4 579 aa11.48□□□□□ -0.57
CCM2-213ENST00000480658 TMEM159Q96B96 161 aa11.48□□□□□ -0.57
CCM2-213ENST00000480658 FAF2Q96CS3 445 aa11.48□□□□□ -0.57
CCM2-213ENST00000480658 HDAC11Q96DB2 347 aa11.48□□□□□ -0.57
CCM2-213ENST00000480658 MCCC1Q96RQ3 725 aaPredicted RBP11.48□□□□□ -0.57
CCM2-213ENST00000480658 SRPK1Q96SB4 655 aaKnown RBP11.48□□□□□ -0.57
CCM2-213ENST00000480658 MAK16Q9BXY0 300 aaKnown RBP11.48□□□□□ -0.57
CCM2-213ENST00000480658 STRADBQ9C0K7 418 aa11.48□□□□□ -0.57
CCM2-213ENST00000480658 POLR1BQ9H9Y6 1135 aa11.48□□□□□ -0.57
CCM2-213ENST00000480658 NENFQ9UMX5 172 aa11.48□□□□□ -0.57
CCM2-213ENST00000480658 PCDHGA8Q9Y5G5 932 aa11.48□□□□□ -0.57
CCM2-213ENST00000480658 FREM2Q5SZK8 3169 aa11.47□□□□□ -0.57
CCM2-213ENST00000480658 AKAP13Q12802 2813 aa11.47□□□□□ -0.57
CCM2-213ENST00000480658 CPED1A4D0V7 1026 aa11.47□□□□□ -0.57
CCM2-213ENST00000480658 TAF4O00268 1085 aa11.47□□□□□ -0.57
CCM2-213ENST00000480658 PPP1R12AO14974 1030 aaPredicted RBP11.47□□□□□ -0.57
CCM2-213ENST00000480658 CSO75390 466 aaKnown RBP11.47□□□□□ -0.57
CCM2-213ENST00000480658 HEXIM1O94992 359 aaKnown RBP11.47□□□□□ -0.57
CCM2-213ENST00000480658 PEX11BO96011 259 aa11.47□□□□□ -0.57
CCM2-213ENST00000480658 RBMS1P29558 406 aaKnown RBP11.47□□□□□ -0.57
CCM2-213ENST00000480658 EIF2S3P41091 472 aaKnown RBP11.47□□□□□ -0.57
CCM2-213ENST00000480658 RGRP47804 291 aa11.47□□□□□ -0.57
CCM2-213ENST00000480658 ITKQ08881 620 aa11.47□□□□□ -0.57
CCM2-213ENST00000480658 ILF3Q12906 894 aaKnown RBP eCLIP11.47□□□□□ -0.57
CCM2-213ENST00000480658 RALGDSQ12967 914 aa11.47□□□□□ -0.57
CCM2-213ENST00000480658 ALG11Q2TAA5 492 aa11.47□□□□□ -0.57
CCM2-213ENST00000480658 BROXQ5VW32 411 aa11.47□□□□□ -0.57
CCM2-213ENST00000480658 PNCKQ6P2M8 343 aa11.47□□□□□ -0.57
CCM2-213ENST00000480658 KDM7AQ6ZMT4 941 aa11.47□□□□□ -0.57
CCM2-213ENST00000480658 ARHGAP36Q6ZRI8 547 aa11.47□□□□□ -0.57
CCM2-213ENST00000480658 ZNF765Q7L2R6 523 aa11.47□□□□□ -0.57
CCM2-213ENST00000480658 NLRP8Q86W28 1048 aa11.47□□□□□ -0.57
CCM2-213ENST00000480658 VSTM4Q8IW00 320 aa11.47□□□□□ -0.57
CCM2-213ENST00000480658 ARL14Q8N4G2 192 aa11.47□□□□□ -0.57
CCM2-213ENST00000480658 MAML1Q92585 1016 aa11.47□□□□□ -0.57
CCM2-213ENST00000480658 ADGRE3Q9BY15 652 aa11.47□□□□□ -0.57
CCM2-213ENST00000480658 GSDMCQ9BYG8 508 aa11.47□□□□□ -0.57
CCM2-213ENST00000480658 CDH19Q9H159 772 aa11.47□□□□□ -0.57
CCM2-213ENST00000480658 NOD2Q9HC29 1040 aa11.47□□□□□ -0.57
CCM2-213ENST00000480658 TRNAU1APQ9NX07 287 aaKnown RBP11.47□□□□□ -0.57
CCM2-213ENST00000480658 DDX56Q9NY93 547 aaKnown RBP11.47□□□□□ -0.57
CCM2-213ENST00000480658 B4GALT6Q9UBX8 382 aa11.47□□□□□ -0.57
CCM2-213ENST00000480658 KLF15Q9UIH9 416 aa11.47□□□□□ -0.57
CCM2-213ENST00000480658 PADI4Q9UM07 663 aa11.47□□□□□ -0.57
CCM2-213ENST00000480658 COQ6Q9Y2Z9 468 aa11.47□□□□□ -0.57
CCM2-213ENST00000480658 PPIL1Q9Y3C6 166 aa11.47□□□□□ -0.57
CCM2-213ENST00000480658 OR1A2Q9Y585 309 aa11.47□□□□□ -0.57
CCM2-213ENST00000480658 CABIN1Q9Y6J0 2220 aa11.47□□□□□ -0.57
CCM2-213ENST00000480658 PRSS38A1L453 326 aa11.46□□□□□ -0.57
CCM2-213ENST00000480658 RGSL1A5PLK6 1076 aa11.46□□□□□ -0.57
CCM2-213ENST00000480658 MUSKO15146 869 aa11.46□□□□□ -0.57
CCM2-213ENST00000480658 NUDT21O43809 227 aaKnown RBP11.46□□□□□ -0.57
CCM2-213ENST00000480658 MFSD11O43934 449 aa11.46□□□□□ -0.57
CCM2-213ENST00000480658 BRINP1O60477 761 aa11.46□□□□□ -0.57
CCM2-213ENST00000480658 MFAP3LO75121 409 aa11.46□□□□□ -0.57
CCM2-213ENST00000480658 USP12O75317 370 aa11.46□□□□□ -0.57
CCM2-213ENST00000480658 ZNF189O75820 626 aaPredicted RBP11.46□□□□□ -0.57
CCM2-213ENST00000480658 MTA2O94776 668 aa11.46□□□□□ -0.57
CCM2-213ENST00000480658 CCNB1P14635 433 aa11.46□□□□□ -0.57
CCM2-213ENST00000480658 GLB1P16278 677 aa11.46□□□□□ -0.57
CCM2-213ENST00000480658 TNNT3P45378 269 aaPredicted RBP11.46□□□□□ -0.57
CCM2-213ENST00000480658 SEMG2Q02383 582 aa11.46□□□□□ -0.57
CCM2-213ENST00000480658 LRP8Q14114 963 aa11.46□□□□□ -0.57
CCM2-213ENST00000480658 ISXQ2M1V0 245 aa11.46□□□□□ -0.57
CCM2-213ENST00000480658 NCBP2-AS2Q69YL0 99 aa11.46□□□□□ -0.57
CCM2-213ENST00000480658 GUSBP11Q6P575 273 aa11.46□□□□□ -0.57
CCM2-213ENST00000480658 ZSWIM9Q86XI8 627 aa11.46□□□□□ -0.57
CCM2-213ENST00000480658 SLC35F3Q8IY50 421 aa11.46□□□□□ -0.57
CCM2-213ENST00000480658 NRSN1Q8IZ57 195 aa11.46□□□□□ -0.57
CCM2-213ENST00000480658 RBFAQ8N0V3 343 aa11.46□□□□□ -0.57
CCM2-213ENST00000480658 AVL9Q8NBF6 648 aa11.46□□□□□ -0.57
CCM2-213ENST00000480658 WDR36Q8NI36 951 aaKnown RBP11.46□□□□□ -0.57
CCM2-213ENST00000480658 PCDH19Q8TAB3 1148 aa11.46□□□□□ -0.57
CCM2-213ENST00000480658 DTD2Q96FN9 168 aa11.46□□□□□ -0.57
CCM2-213ENST00000480658 COQ10AQ96MF6 247 aa11.46□□□□□ -0.57
CCM2-213ENST00000480658 TMEM74Q96NL1 305 aa11.46□□□□□ -0.57
CCM2-213ENST00000480658 SEMA3CQ99985 751 aa11.46□□□□□ -0.57
CCM2-213ENST00000480658 CCDC3Q9BQI4 270 aa11.46□□□□□ -0.57
CCM2-213ENST00000480658 DPH1Q9BZG8 443 aa11.46□□□□□ -0.57
CCM2-213ENST00000480658 NHEJ1Q9H9Q4 299 aaPredicted RBP11.46□□□□□ -0.57
CCM2-213ENST00000480658 NT5MQ9NPB1 228 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms