RNA–Protein interactions for RNA: ENST00000480420.5

CTPS1-209, Transcript of CTP synthase 1, humanhuman

TSL 3

Gene CTPS1, Length 750 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-209ENST00000480420 NOD2Q9HC29 1040 aa8.11□□□□□ -1.11
CTPS1-209ENST00000480420 PCDH18Q9HCL0 1135 aa8.11□□□□□ -1.11
CTPS1-209ENST00000480420 DKK4Q9UBT3 224 aa8.11□□□□□ -1.11
CTPS1-209ENST00000480420 B4GALT6Q9UBX8 382 aa8.11□□□□□ -1.11
CTPS1-209ENST00000480420 CD84Q9UIB8 345 aa8.11□□□□□ -1.11
CTPS1-209ENST00000480420 SALL4Q9UJQ4 1053 aa8.11□□□□□ -1.11
CTPS1-209ENST00000480420 PNMA8BQ9ULN7 279 aaPredicted RBP8.11□□□□□ -1.11
CTPS1-209ENST00000480420 RAI2Q9Y5P3 530 aa8.11□□□□□ -1.11
CTPS1-209ENST00000480420 UNC13CQ8NB66 2214 aa8.11□□□□□ -1.11
CTPS1-209ENST00000480420 LRP4O75096 1905 aa8.11□□□□□ -1.11
CTPS1-209ENST00000480420 LY6G6EA0A0G2JKS1 128 aa8.1□□□□□ -1.11
CTPS1-209ENST00000480420 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.1□□□□□ -1.11
CTPS1-209ENST00000480420 TMEM202A6NGA9 273 aa8.1□□□□□ -1.11
CTPS1-209ENST00000480420 KLK10O43240 276 aa8.1□□□□□ -1.11
CTPS1-209ENST00000480420 AKR1B10O60218 316 aa8.1□□□□□ -1.11
CTPS1-209ENST00000480420 GP1BAP07359 652 aa8.1□□□□□ -1.11
CTPS1-209ENST00000480420 CD48P09326 243 aa8.1□□□□□ -1.11
CTPS1-209ENST00000480420 TPM1P09493 284 aa8.1□□□□□ -1.11
CTPS1-209ENST00000480420 CYP2A6P11509 494 aaPredicted RBP8.1□□□□□ -1.11
CTPS1-209ENST00000480420 NFKBIAP25963 317 aa8.1□□□□□ -1.11
CTPS1-209ENST00000480420 PCK1P35558 622 aa8.1□□□□□ -1.11
CTPS1-209ENST00000480420 GNPDA1P46926 289 aa8.1□□□□□ -1.11
CTPS1-209ENST00000480420 HCAR3P49019 387 aa8.1□□□□□ -1.11
CTPS1-209ENST00000480420 PCBP4P57723 403 aaKnown RBP8.1□□□□□ -1.11
CTPS1-209ENST00000480420 RALGDSQ12967 914 aa8.1□□□□□ -1.11
CTPS1-209ENST00000480420 MTM1Q13496 603 aa8.1□□□□□ -1.11
CTPS1-209ENST00000480420 DPYSQ14117 519 aa8.1□□□□□ -1.11
CTPS1-209ENST00000480420 RFTN1Q14699 578 aaPredicted RBP8.1□□□□□ -1.11
CTPS1-209ENST00000480420 RTP5Q14D33 572 aa8.1□□□□□ -1.11
CTPS1-209ENST00000480420 ISXQ2M1V0 245 aa8.1□□□□□ -1.11
CTPS1-209ENST00000480420 TBC1D25Q3MII6 688 aa8.1□□□□□ -1.11
CTPS1-209ENST00000480420 ATP13A4Q4VNC1 1196 aa8.1□□□□□ -1.11
CTPS1-209ENST00000480420 BROXQ5VW32 411 aa8.1□□□□□ -1.11
CTPS1-209ENST00000480420 HGSNATQ68CP4 663 aa8.1□□□□□ -1.11
CTPS1-209ENST00000480420 RAET1GQ6H3X3 334 aa8.1□□□□□ -1.11
CTPS1-209ENST00000480420 LIPIQ6XZB0 460 aa8.1□□□□□ -1.11
CTPS1-209ENST00000480420 CYP4V2Q6ZWL3 525 aaPredicted RBP8.1□□□□□ -1.11
CTPS1-209ENST00000480420 POLNQ7Z5Q5 900 aa8.1□□□□□ -1.11
CTPS1-209ENST00000480420 CPNE8Q86YQ8 564 aa8.1□□□□□ -1.11
CTPS1-209ENST00000480420 PSTKQ8IV42 348 aaKnown RBP8.1□□□□□ -1.11
CTPS1-209ENST00000480420 SDR16C5Q8N3Y7 309 aa8.1□□□□□ -1.11
CTPS1-209ENST00000480420 PGBD5Q8N414 524 aa8.1□□□□□ -1.11
CTPS1-209ENST00000480420 FAM181AQ8N9Y4 354 aa8.1□□□□□ -1.11
CTPS1-209ENST00000480420 RNF214Q8ND24 703 aa8.1□□□□□ -1.11
CTPS1-209ENST00000480420 OR56A4Q8NGH8 313 aa8.1□□□□□ -1.11
CTPS1-209ENST00000480420 TPCN2Q8NHX9 752 aa8.1□□□□□ -1.11
CTPS1-209ENST00000480420 ZNF564Q8TBZ8 553 aaPredicted RBP8.1□□□□□ -1.11
CTPS1-209ENST00000480420 HCAR2Q8TDS4 363 aa8.1□□□□□ -1.11
CTPS1-209ENST00000480420 KCNE4Q8WWG9 221 aa8.1□□□□□ -1.11
CTPS1-209ENST00000480420 CTNNBL1Q8WYA6 563 aaPredicted RBP8.1□□□□□ -1.11
CTPS1-209ENST00000480420 OR1E3Q8WZA6 343 aa8.1□□□□□ -1.11
CTPS1-209ENST00000480420 NAT6Q93015 286 aa8.1□□□□□ -1.11
CTPS1-209ENST00000480420 FUBP1Q96AE4 644 aaKnown RBP8.1□□□□□ -1.11
CTPS1-209ENST00000480420 VOPP1Q96AW1 172 aa8.1□□□□□ -1.11
CTPS1-209ENST00000480420 NUS1Q96E22 293 aa8.1□□□□□ -1.11
CTPS1-209ENST00000480420 PDXPQ96GD0 296 aa8.1□□□□□ -1.11
CTPS1-209ENST00000480420 BBC3Q96PG8 261 aaPredicted RBP8.1□□□□□ -1.11
CTPS1-209ENST00000480420 GFM1Q96RP9 751 aaKnown RBP8.1□□□□□ -1.11
CTPS1-209ENST00000480420 SEMA3CQ99985 751 aa8.1□□□□□ -1.11
CTPS1-209ENST00000480420 FUCA2Q9BTY2 467 aa8.1□□□□□ -1.11
CTPS1-209ENST00000480420 XPO4Q9C0E2 1151 aaKnown RBP8.1□□□□□ -1.11
CTPS1-209ENST00000480420 WDR26Q9H7D7 661 aa8.1□□□□□ -1.11
CTPS1-209ENST00000480420 POLR1BQ9H9Y6 1135 aa8.1□□□□□ -1.11
CTPS1-209ENST00000480420 CARS2Q9HA77 564 aaKnown RBP8.1□□□□□ -1.11
CTPS1-209ENST00000480420 USP29Q9HBJ7 922 aa8.1□□□□□ -1.11
CTPS1-209ENST00000480420 GPR27Q9NS67 375 aa8.1□□□□□ -1.11
CTPS1-209ENST00000480420 ZNHIT6Q9NWK9 470 aaKnown RBP8.1□□□□□ -1.11
CTPS1-209ENST00000480420 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.1□□□□□ -1.11
CTPS1-209ENST00000480420 CAPN11Q9UMQ6 739 aa8.1□□□□□ -1.11
CTPS1-209ENST00000480420 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.1□□□□□ -1.112e-6■■□□□ 13.1
CTPS1-209ENST00000480420 U3KQA8 63 aa8.1□□□□□ -1.11
CTPS1-209ENST00000480420 ARHGEF17Q96PE2 2063 aaPredicted RBP8.09□□□□□ -1.11
CTPS1-209ENST00000480420 A0A1W2PQJ5 194 aa8.09□□□□□ -1.11
CTPS1-209ENST00000480420 TSPAN11A1L157 253 aa8.09□□□□□ -1.11
CTPS1-209ENST00000480420 PMS2P1A4D2B8 440 aa8.09□□□□□ -1.11
CTPS1-209ENST00000480420 TPP1O14773 563 aa8.09□□□□□ -1.11
CTPS1-209ENST00000480420 MFSD11O43934 449 aa8.09□□□□□ -1.11
CTPS1-209ENST00000480420 TNFSF15O95150 251 aa8.09□□□□□ -1.11
CTPS1-209ENST00000480420 ASMTLO95671 621 aa8.09□□□□□ -1.11
CTPS1-209ENST00000480420 SLC4A1P02730 911 aa8.09□□□□□ -1.11
CTPS1-209ENST00000480420 RPLP0P05388 317 aaKnown RBP8.09□□□□□ -1.11
CTPS1-209ENST00000480420 KRT10P13645 584 aa8.09□□□□□ -1.11
CTPS1-209ENST00000480420 KELP23276 732 aa8.09□□□□□ -1.11
CTPS1-209ENST00000480420 ALDH4A1P30038 563 aa8.09□□□□□ -1.11
CTPS1-209ENST00000480420 VIPR1P32241 457 aa8.09□□□□□ -1.11
CTPS1-209ENST00000480420 ETV3P41162 512 aa8.09□□□□□ -1.11
CTPS1-209ENST00000480420 LSSP48449 732 aa8.09□□□□□ -1.11
CTPS1-209ENST00000480420 CSNK1DP48730 415 aa8.09□□□□□ -1.11
CTPS1-209ENST00000480420 POLD2P49005 469 aa8.09□□□□□ -1.11
CTPS1-209ENST00000480420 PEX5P50542 639 aa8.09□□□□□ -1.11
CTPS1-209ENST00000480420 ZNF135P52742 658 aaPredicted RBP8.09□□□□□ -1.11
CTPS1-209ENST00000480420 CCL7P80098 99 aa8.09□□□□□ -1.11
CTPS1-209ENST00000480420 DSC2Q02487 901 aa8.09□□□□□ -1.11
CTPS1-209ENST00000480420 NSUN2Q08J23 767 aaKnown RBP eCLIP8.09□□□□□ -1.11
CTPS1-209ENST00000480420 MESDQ14696 234 aa8.09□□□□□ -1.11
CTPS1-209ENST00000480420 DPYSL2Q16555 572 aa8.09□□□□□ -1.11
CTPS1-209ENST00000480420 ZSCAN23Q3MJ62 389 aa8.09□□□□□ -1.11
CTPS1-209ENST00000480420 AMZ1Q400G9 498 aa8.09□□□□□ -1.11
CTPS1-209ENST00000480420 FIGNQ5HY92 759 aa8.09□□□□□ -1.11
CTPS1-209ENST00000480420 FAM182AQ5T1J6 154 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms