RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 KLHL8Q9P2G9 620 aaPredicted RBP9.13□□□□□ -0.95
VCP-206ENST00000480327 ZNF148Q9UQR1 794 aa9.13□□□□□ -0.95
VCP-206ENST00000480327 NCKAP1Q9Y2A7 1128 aa9.13□□□□□ -0.95
VCP-206ENST00000480327 ATP8A1Q9Y2Q0 1164 aa9.13□□□□□ -0.95
VCP-206ENST00000480327 PCDHGC4Q9Y5F7 938 aa9.13□□□□□ -0.95
VCP-206ENST00000480327 SAR1BQ9Y6B6 198 aa9.13□□□□□ -0.95
VCP-206ENST00000480327 FAM47DPA6NHR8 397 aa9.12□□□□□ -0.95
VCP-206ENST00000480327 C16orf96A6NNT2 1141 aa9.12□□□□□ -0.95
VCP-206ENST00000480327 PGRMC1O00264 195 aaKnown RBP9.12□□□□□ -0.95
VCP-206ENST00000480327 MTSS1O43312 755 aa9.12□□□□□ -0.95
VCP-206ENST00000480327 C1QL1O75973 258 aa9.12□□□□□ -0.95
VCP-206ENST00000480327 ZIC2O95409 532 aaPredicted RBP9.12□□□□□ -0.95
VCP-206ENST00000480327 PRB1P04280 392 aa9.12□□□□□ -0.95
VCP-206ENST00000480327 PRKCGP05129 697 aa9.12□□□□□ -0.95
VCP-206ENST00000480327 TCP1P17987 556 aaKnown RBP9.12□□□□□ -0.95
VCP-206ENST00000480327 NFKB1P19838 968 aa9.12□□□□□ -0.95
VCP-206ENST00000480327 CR2P20023 1033 aa9.12□□□□□ -0.95
VCP-206ENST00000480327 ITPKBP27987 946 aa9.12□□□□□ -0.95
VCP-206ENST00000480327 DRD3P35462 400 aa9.12□□□□□ -0.95
VCP-206ENST00000480327 CD86P42081 329 aa9.12□□□□□ -0.95
VCP-206ENST00000480327 KCNJ1P48048 391 aa9.12□□□□□ -0.95
VCP-206ENST00000480327 GDF10P55107 478 aa9.12□□□□□ -0.95
VCP-206ENST00000480327 AP1S1P61966 158 aa9.12□□□□□ -0.95
VCP-206ENST00000480327 PPP2CBP62714 309 aa9.12□□□□□ -0.95
VCP-206ENST00000480327 RACK1P63244 317 aaKnown RBP9.12□□□□□ -0.95
VCP-206ENST00000480327 PPP2CAP67775 309 aa9.12□□□□□ -0.95
VCP-206ENST00000480327 SEMG2Q02383 582 aa9.12□□□□□ -0.95
VCP-206ENST00000480327 NSUN2Q08J23 767 aaKnown RBP eCLIP9.12□□□□□ -0.95
VCP-206ENST00000480327 IHHQ14623 411 aa9.12□□□□□ -0.95
VCP-206ENST00000480327 SUZ12Q15022 739 aaKnown RBP9.12□□□□□ -0.95
VCP-206ENST00000480327 ZNF805Q5CZA5 627 aa9.12□□□□□ -0.95
VCP-206ENST00000480327 CFAP58Q5T655 872 aa9.12□□□□□ -0.95
VCP-206ENST00000480327 FBXL19Q6PCT2 694 aa9.12□□□□□ -0.95
VCP-206ENST00000480327 NYAP1Q6ZVC0 841 aa9.12□□□□□ -0.95
VCP-206ENST00000480327 PARS2Q7L3T8 475 aaKnown RBP9.12□□□□□ -0.95
VCP-206ENST00000480327 KDELC2Q7Z4H8 507 aa9.12□□□□□ -0.95
VCP-206ENST00000480327 PRUNE1Q86TP1 453 aa9.12□□□□□ -0.95
VCP-206ENST00000480327 PDCD7Q8N8D1 485 aaKnown RBP9.12□□□□□ -0.95
VCP-206ENST00000480327 PRELID2Q8N945 189 aa9.12□□□□□ -0.95
VCP-206ENST00000480327 FAM71DQ8N9W8 422 aa9.12□□□□□ -0.95
VCP-206ENST00000480327 SPATA22Q8NHS9 363 aa9.12□□□□□ -0.95
VCP-206ENST00000480327 SLC35B2Q8TB61 432 aa9.12□□□□□ -0.95
VCP-206ENST00000480327 ARRDC2Q8TBH0 407 aa9.12□□□□□ -0.95
VCP-206ENST00000480327 CCDC110Q8TBZ0 833 aa9.12□□□□□ -0.95
VCP-206ENST00000480327 MAIP1Q8WWC4 291 aa9.12□□□□□ -0.95
VCP-206ENST00000480327 FATE1Q969F0 183 aa9.12□□□□□ -0.95
VCP-206ENST00000480327 RBM15Q96T37 977 aaKnown RBP eCLIP9.12□□□□□ -0.95
VCP-206ENST00000480327 ELF4Q99607 663 aaPredicted RBP9.12□□□□□ -0.95
VCP-206ENST00000480327 FERMT1Q9BQL6 677 aa9.12□□□□□ -0.95
VCP-206ENST00000480327 SUV39H2Q9H5I1 410 aa9.12□□□□□ -0.95
VCP-206ENST00000480327 ATP13A3Q9H7F0 1226 aa9.12□□□□□ -0.95
VCP-206ENST00000480327 USP29Q9HBJ7 922 aa9.12□□□□□ -0.95
VCP-206ENST00000480327 GLOD4Q9HC38 313 aa9.12□□□□□ -0.95
VCP-206ENST00000480327 HAUS2Q9NVX0 235 aa9.12□□□□□ -0.95
VCP-206ENST00000480327 STK10O94804 968 aaKnown RBP9.11□□□□□ -0.95
VCP-206ENST00000480327 IFNB1P01574 187 aa9.11□□□□□ -0.95
VCP-206ENST00000480327 MMP2P08253 660 aa9.11□□□□□ -0.95
VCP-206ENST00000480327 ETS1P14921 441 aa9.11□□□□□ -0.95
VCP-206ENST00000480327 PRLRP16471 622 aa9.11□□□□□ -0.95
VCP-206ENST00000480327 ITIH2P19823 946 aa9.11□□□□□ -0.95
VCP-206ENST00000480327 XPAP23025 273 aaPredicted RBP9.11□□□□□ -0.95
VCP-206ENST00000480327 ITGB7P26010 798 aa9.11□□□□□ -0.95
VCP-206ENST00000480327 SERPINA4P29622 427 aa9.11□□□□□ -0.95
VCP-206ENST00000480327 CD68P34810 354 aaPredicted RBP9.11□□□□□ -0.95
VCP-206ENST00000480327 DEKP35659 375 aaKnown RBP9.11□□□□□ -0.95
VCP-206ENST00000480327 CSNK1DP48730 415 aa9.11□□□□□ -0.95
VCP-206ENST00000480327 ACADVLP49748 655 aa9.11□□□□□ -0.95
VCP-206ENST00000480327 SKOR1P84550 965 aa9.11□□□□□ -0.95
VCP-206ENST00000480327 TRAF2Q12933 501 aa9.11□□□□□ -0.95
VCP-206ENST00000480327 BNIP3Q12983 259 aa9.11□□□□□ -0.95
VCP-206ENST00000480327 PCSK7Q16549 785 aa9.11□□□□□ -0.95
VCP-206ENST00000480327 CCNG2Q16589 344 aa9.11□□□□□ -0.95
VCP-206ENST00000480327 ANKRD20A2Q5SQ80 823 aa9.11□□□□□ -0.95
VCP-206ENST00000480327 ANKRD20A1Q5TYW2 823 aa9.11□□□□□ -0.95
VCP-206ENST00000480327 ANKRD20A3Q5VUR7 823 aa9.11□□□□□ -0.95
VCP-206ENST00000480327 ERN2Q76MJ5 926 aaKnown RBP9.11□□□□□ -0.95
VCP-206ENST00000480327 GSTA5Q7RTV2 222 aa9.11□□□□□ -0.95
VCP-206ENST00000480327 TTC7BQ86TV6 843 aa9.11□□□□□ -0.95
VCP-206ENST00000480327 ZSCAN30Q86W11 494 aa9.11□□□□□ -0.95
VCP-206ENST00000480327 TMPRSS12Q86WS5 348 aa9.11□□□□□ -0.95
VCP-206ENST00000480327 ZSWIM9Q86XI8 627 aa9.11□□□□□ -0.95
VCP-206ENST00000480327 SPATS2Q86XZ4 545 aaKnown RBP9.11□□□□□ -0.95
VCP-206ENST00000480327 OR14C36Q8NHC7 312 aa9.11□□□□□ -0.95
VCP-206ENST00000480327 ACTRT1Q8TDG2 376 aa9.11□□□□□ -0.95
VCP-206ENST00000480327 FAM131CQ96AQ9 280 aa9.11□□□□□ -0.95
VCP-206ENST00000480327 PPP1R16AQ96I34 528 aa9.11□□□□□ -0.95
VCP-206ENST00000480327 TEKT5Q96M29 485 aa9.11□□□□□ -0.95
VCP-206ENST00000480327 TUBGCP5Q96RT8 1024 aa9.11□□□□□ -0.95
VCP-206ENST00000480327 OSBPL1AQ9BXW6 950 aa9.11□□□□□ -0.95
VCP-206ENST00000480327 CPEB1Q9BZB8 566 aaKnown RBP9.11□□□□□ -0.95
VCP-206ENST00000480327 FTSJ1Q9UET6 329 aa9.11□□□□□ -0.95
VCP-206ENST00000480327 AMACRQ9UHK6 382 aa9.11□□□□□ -0.95
VCP-206ENST00000480327 RSPH14Q9UHP6 348 aa9.11□□□□□ -0.95
VCP-206ENST00000480327 GGT7Q9UJ14 662 aa9.11□□□□□ -0.95
VCP-206ENST00000480327 SCML1Q9UN30 329 aa9.11□□□□□ -0.95
VCP-206ENST00000480327 ITM2BQ9Y287 266 aa9.11□□□□□ -0.95
VCP-206ENST00000480327 RAI2Q9Y5P3 530 aa9.11□□□□□ -0.95
VCP-206ENST00000480327 FLNBO75369 2602 aaKnown RBP9.1□□□□□ -0.95
VCP-206ENST00000480327 KIF26BQ2KJY2 2108 aa9.1□□□□□ -0.95
VCP-206ENST00000480327 TBC1D3DA0A087WVF3 549 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms