RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 FAM72BQ86X60 149 aa16.15■□□□□ 0.18
DDX56-210ENST00000479440 FAM129CQ86XR2 697 aa16.15■□□□□ 0.18
DDX56-210ENST00000479440 EMC1Q8N766 993 aa16.15■□□□□ 0.18
DDX56-210ENST00000479440 RTL3Q8N8U3 475 aaKnown RBP16.15■□□□□ 0.18
DDX56-210ENST00000479440 CCL4L1Q8NHW4 92 aa16.15■□□□□ 0.18
DDX56-210ENST00000479440 TEFMQ96QE5 360 aaKnown RBP16.15■□□□□ 0.18
DDX56-210ENST00000479440 SIX2Q9NPC8 291 aa16.15■□□□□ 0.18
DDX56-210ENST00000479440 UBA2Q9UBT2 640 aaPredicted RBP16.15■□□□□ 0.18
DDX56-210ENST00000479440 ZFC3H1O60293 1989 aaKnown RBP16.15■□□□□ 0.18
DDX56-210ENST00000479440 ANKRD36A6QL64 1941 aa16.14■□□□□ 0.17
DDX56-210ENST00000479440 FAM170AA1A519 330 aa16.14■□□□□ 0.17
DDX56-210ENST00000479440 B4E171 279 aa16.14■□□□□ 0.17
DDX56-210ENST00000479440 THRAP10827 490 aa16.14■□□□□ 0.17
DDX56-210ENST00000479440 SERPINA4P29622 427 aa16.14■□□□□ 0.17
DDX56-210ENST00000479440 TSPAN7P41732 249 aa16.14■□□□□ 0.17
DDX56-210ENST00000479440 MC1RQ01726 317 aa16.14■□□□□ 0.17
DDX56-210ENST00000479440 C15orf59Q2T9L4 293 aaPredicted RBP16.14■□□□□ 0.17
DDX56-210ENST00000479440 TAF3Q5VWG9 929 aa16.14■□□□□ 0.17
DDX56-210ENST00000479440 NLGN4XQ8N0W4 816 aa16.14■□□□□ 0.17
DDX56-210ENST00000479440 PAF1Q8N7H5 531 aa16.14■□□□□ 0.17
DDX56-210ENST00000479440 NETO2Q8NC67 525 aa16.14■□□□□ 0.17
DDX56-210ENST00000479440 NLGN4YQ8NFZ3 816 aaPredicted RBP16.14■□□□□ 0.17
DDX56-210ENST00000479440 APOBEC4Q8WW27 367 aaKnown RBP16.14■□□□□ 0.17
DDX56-210ENST00000479440 MIB2Q96AX9 1013 aa16.14■□□□□ 0.17
DDX56-210ENST00000479440 ATP13A3Q9H7F0 1226 aa16.14■□□□□ 0.17
DDX56-210ENST00000479440 CARS2Q9HA77 564 aaKnown RBP16.14■□□□□ 0.17
DDX56-210ENST00000479440 PLAAQ9Y263 795 aa16.14■□□□□ 0.17
DDX56-210ENST00000479440 RELNP78509 3460 aa16.14■□□□□ 0.17
DDX56-210ENST00000479440 LRRK1Q38SD2 2015 aa16.13■□□□□ 0.17
DDX56-210ENST00000479440 PRKCGP05129 697 aa16.13■□□□□ 0.17
DDX56-210ENST00000479440 MYCLP1P12525 358 aaPredicted RBP16.13■□□□□ 0.17
DDX56-210ENST00000479440 CD1CP29017 333 aa16.13■□□□□ 0.17
DDX56-210ENST00000479440 EPHB2P29323 1055 aa16.13■□□□□ 0.17
DDX56-210ENST00000479440 TRIM23P36406 574 aa16.13■□□□□ 0.17
DDX56-210ENST00000479440 MTIF2P46199 727 aaKnown RBP16.13■□□□□ 0.17
DDX56-210ENST00000479440 CD97P48960 835 aa16.13■□□□□ 0.17
DDX56-210ENST00000479440 NOMO3P69849 1222 aa16.13■□□□□ 0.17
DDX56-210ENST00000479440 KLRB1Q12918 225 aa16.13■□□□□ 0.17
DDX56-210ENST00000479440 RAPGEF1Q13905 1077 aa16.13■□□□□ 0.17
DDX56-210ENST00000479440 NAA35Q5VZE5 725 aa16.13■□□□□ 0.17
DDX56-210ENST00000479440 NRSN1Q8IZ57 195 aa16.13■□□□□ 0.17
DDX56-210ENST00000479440 RXFP2Q8WXD0 754 aa16.13■□□□□ 0.17
DDX56-210ENST00000479440 NTAN1Q96AB6 310 aa16.13■□□□□ 0.17
DDX56-210ENST00000479440 ABHD17AQ96GS6 310 aa16.13■□□□□ 0.17
DDX56-210ENST00000479440 SPATS2LQ9NUQ6 558 aaKnown RBP16.13■□□□□ 0.17
DDX56-210ENST00000479440 TAAR2Q9P1P5 351 aa16.13■□□□□ 0.17
DDX56-210ENST00000479440 RWDD2AQ9UIY3 292 aa16.13■□□□□ 0.17
DDX56-210ENST00000479440 PRR19A6NJB7 356 aa16.12■□□□□ 0.17
DDX56-210ENST00000479440 EFCAB7A8K855 629 aa16.12■□□□□ 0.17
DDX56-210ENST00000479440 RASA4BC9J798 803 aa16.12■□□□□ 0.17
DDX56-210ENST00000479440 NKX2-8O15522 239 aa16.12■□□□□ 0.17
DDX56-210ENST00000479440 RASA4O43374 803 aa16.12■□□□□ 0.17
DDX56-210ENST00000479440 DUX1O43812 170 aa16.12■□□□□ 0.17
DDX56-210ENST00000479440 ECEL1O95672 775 aa16.12■□□□□ 0.17
DDX56-210ENST00000479440 FGF1P05230 155 aa16.12■□□□□ 0.17
DDX56-210ENST00000479440 MAP4P27816 1152 aaKnown RBP16.12■□□□□ 0.17
DDX56-210ENST00000479440 PTPN9P43378 593 aa16.12■□□□□ 0.17
DDX56-210ENST00000479440 GPLD1P80108 840 aa16.12■□□□□ 0.17
DDX56-210ENST00000479440 RALGDSQ12967 914 aa16.12■□□□□ 0.17
DDX56-210ENST00000479440 CYTH1Q15438 398 aa16.12■□□□□ 0.17
DDX56-210ENST00000479440 CCDC14Q49A88 953 aa16.12■□□□□ 0.17
DDX56-210ENST00000479440 RAB6CQ53S08 254 aa16.12■□□□□ 0.17
DDX56-210ENST00000479440 PNCKQ6P2M8 343 aa16.12■□□□□ 0.17
DDX56-210ENST00000479440 LIPIQ6XZB0 460 aa16.12■□□□□ 0.17
DDX56-210ENST00000479440 ZSWIM9Q86XI8 627 aa16.12■□□□□ 0.17
DDX56-210ENST00000479440 CCDC185Q8N715 623 aa16.12■□□□□ 0.17
DDX56-210ENST00000479440 CPA5Q8WXQ8 436 aa16.12■□□□□ 0.17
DDX56-210ENST00000479440 LGR4Q9BXB1 951 aa16.12■□□□□ 0.17
DDX56-210ENST00000479440 KLC2Q9H0B6 622 aa16.12■□□□□ 0.17
DDX56-210ENST00000479440 RAB6CQ9H0N0 254 aa16.12■□□□□ 0.17
DDX56-210ENST00000479440 NOL6Q9H6R4 1146 aaKnown RBP16.12■□□□□ 0.17
DDX56-210ENST00000479440 SUDS3Q9H7L9 328 aaPredicted RBP16.12■□□□□ 0.17
DDX56-210ENST00000479440 CATSPERBQ9H7T0 1116 aa16.12■□□□□ 0.17
DDX56-210ENST00000479440 PHPT1Q9NRX4 125 aaPredicted RBP16.12■□□□□ 0.17
DDX56-210ENST00000479440 TRNAU1APQ9NX07 287 aaKnown RBP16.12■□□□□ 0.17
DDX56-210ENST00000479440 PILRAQ9UKJ1 303 aa16.12■□□□□ 0.17
DDX56-210ENST00000479440 IGHV1OR21-1A0A087WYE8 117 aa16.11■□□□□ 0.17
DDX56-210ENST00000479440 TEX33O43247 280 aa16.11■□□□□ 0.17
DDX56-210ENST00000479440 CSF2RBP32927 897 aa16.11■□□□□ 0.17
DDX56-210ENST00000479440 NOP2P46087 812 aaKnown RBP16.11■□□□□ 0.17
DDX56-210ENST00000479440 COPB1P53618 953 aaKnown RBP16.11■□□□□ 0.17
DDX56-210ENST00000479440 HDAC4P56524 1084 aa16.11■□□□□ 0.17
DDX56-210ENST00000479440 SQSTM1Q13501 440 aa16.11■□□□□ 0.17
DDX56-210ENST00000479440 ANKS6Q68DC2 871 aa16.11■□□□□ 0.17
DDX56-210ENST00000479440 DPPA4Q7L190 304 aa16.11■□□□□ 0.17
DDX56-210ENST00000479440 NRROSQ86YC3 692 aa16.11■□□□□ 0.17
DDX56-210ENST00000479440 CAMK1DQ8IU85 385 aa16.11■□□□□ 0.17
DDX56-210ENST00000479440 FAM172AQ8WUF8 416 aa16.11■□□□□ 0.17
DDX56-210ENST00000479440 STARD8Q92502 1023 aa16.11■□□□□ 0.17
DDX56-210ENST00000479440 ZPBPQ9BS86 351 aa16.11■□□□□ 0.17
DDX56-210ENST00000479440 KCNK4Q9NYG8 393 aa16.11■□□□□ 0.17
DDX56-210ENST00000479440 UNC13CQ8NB66 2214 aa16.11■□□□□ 0.17
DDX56-210ENST00000479440 C2CD4BA6NLJ0 364 aa16.1■□□□□ 0.17
DDX56-210ENST00000479440 ENO4A6NNW6 628 aa16.1■□□□□ 0.17
DDX56-210ENST00000479440 WASH4PA8MWX3 477 aa16.1■□□□□ 0.17
DDX56-210ENST00000479440 MTSS1O43312 755 aa16.1■□□□□ 0.17
DDX56-210ENST00000479440 ERCC5P28715 1186 aaPredicted RBP16.1■□□□□ 0.17
DDX56-210ENST00000479440 OAS2P29728 719 aaKnown RBP16.1■□□□□ 0.17
DDX56-210ENST00000479440 GNPDA1P46926 289 aa16.1■□□□□ 0.17
DDX56-210ENST00000479440 PPM1FP49593 454 aaPredicted RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms