RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 TMEM170AQ8WVE7 144 aa4.26□□□□□ -1.73
CDC42BPA-212ENST00000478573 FAR1Q8WVX9 515 aa4.26□□□□□ -1.73
CDC42BPA-212ENST00000478573 KLHL29Q96CT2 875 aa4.26□□□□□ -1.73
CDC42BPA-212ENST00000478573 KIF1BPQ96EK5 621 aa4.26□□□□□ -1.73
CDC42BPA-212ENST00000478573 MPHOSPH8Q99549 860 aa4.26□□□□□ -1.73
CDC42BPA-212ENST00000478573 BARD1Q99728 777 aaKnown RBP4.26□□□□□ -1.73
CDC42BPA-212ENST00000478573 IFT27Q9BW83 186 aa4.26□□□□□ -1.73
CDC42BPA-212ENST00000478573 RANBP17Q9H2T7 1088 aaKnown RBP4.26□□□□□ -1.73
CDC42BPA-212ENST00000478573 MUC13Q9H3R2 512 aa4.26□□□□□ -1.73
CDC42BPA-212ENST00000478573 ENTPD7Q9NQZ7 604 aa4.26□□□□□ -1.73
CDC42BPA-212ENST00000478573 KRT84Q9NSB2 600 aa4.26□□□□□ -1.73
CDC42BPA-212ENST00000478573 IL1RAPL1Q9NZN1 696 aa4.26□□□□□ -1.73
CDC42BPA-212ENST00000478573 PEMTQ9UBM1 199 aa4.26□□□□□ -1.73
CDC42BPA-212ENST00000478573 HSPB7Q9UBY9 170 aa4.26□□□□□ -1.73
CDC42BPA-212ENST00000478573 SLC8A2Q9UPR5 921 aa4.26□□□□□ -1.73
CDC42BPA-212ENST00000478573 INSL5Q9Y5Q6 135 aa4.26□□□□□ -1.73
CDC42BPA-212ENST00000478573 MST1RQ04912 1400 aa4.26□□□□□ -1.73
CDC42BPA-212ENST00000478573 ADGRB1O14514 1584 aa4.26□□□□□ -1.73
CDC42BPA-212ENST00000478573 USP54Q70EL1 1684 aa4.26□□□□□ -1.73
CDC42BPA-212ENST00000478573 WNK3Q9BYP7 1800 aa4.25□□□□□ -1.73
CDC42BPA-212ENST00000478573 PHRF1Q9P1Y6 1649 aaKnown RBP4.25□□□□□ -1.73
CDC42BPA-212ENST00000478573 FSD2A1L4K1 749 aa4.25□□□□□ -1.73
CDC42BPA-212ENST00000478573 PABPN1LA6NDY0 278 aaKnown RBP4.25□□□□□ -1.73
CDC42BPA-212ENST00000478573 CXorf65A6NEN9 183 aa4.25□□□□□ -1.73
CDC42BPA-212ENST00000478573 LDLRAD4O15165 306 aa4.25□□□□□ -1.73
CDC42BPA-212ENST00000478573 TGFB1I1O43294 461 aa4.25□□□□□ -1.73
CDC42BPA-212ENST00000478573 ATG13O75143 517 aa4.25□□□□□ -1.73
CDC42BPA-212ENST00000478573 PTP4A3O75365 173 aa4.25□□□□□ -1.73
CDC42BPA-212ENST00000478573 NEURL1O76050 574 aa4.25□□□□□ -1.73
CDC42BPA-212ENST00000478573 SEC14L2O76054 403 aa4.25□□□□□ -1.73
CDC42BPA-212ENST00000478573 CCNDBP1O95273 360 aa4.25□□□□□ -1.73
CDC42BPA-212ENST00000478573 NFATC1O95644 943 aa4.25□□□□□ -1.73
CDC42BPA-212ENST00000478573 ACADMP11310 421 aa4.25□□□□□ -1.73
CDC42BPA-212ENST00000478573 CD72P21854 359 aa4.25□□□□□ -1.73
CDC42BPA-212ENST00000478573 RGS2P41220 211 aa4.25□□□□□ -1.73
CDC42BPA-212ENST00000478573 DRG2P55039 364 aaKnown RBP4.25□□□□□ -1.73
CDC42BPA-212ENST00000478573 ARF3P61204 181 aaPredicted RBP4.25□□□□□ -1.73
CDC42BPA-212ENST00000478573 ARF1P84077 181 aaKnown RBP4.25□□□□□ -1.73
CDC42BPA-212ENST00000478573 MEA1Q16626 185 aa4.25□□□□□ -1.73
CDC42BPA-212ENST00000478573 FBXO43Q4G163 708 aa4.25□□□□□ -1.73
CDC42BPA-212ENST00000478573 ZNF628Q5EBL2 1059 aa4.25□□□□□ -1.73
CDC42BPA-212ENST00000478573 PIK3CD-AS1Q5SR53 167 aa4.25□□□□□ -1.73
CDC42BPA-212ENST00000478573 ITPRIPL1Q6GPH6 555 aa4.25□□□□□ -1.73
CDC42BPA-212ENST00000478573 ISM2Q6H9L7 571 aa4.25□□□□□ -1.73
CDC42BPA-212ENST00000478573 CAPRIN2Q6IMN6 1127 aaKnown RBP4.25□□□□□ -1.73
CDC42BPA-212ENST00000478573 PDXDC1Q6P996 788 aa4.25□□□□□ -1.73
CDC42BPA-212ENST00000478573 IL20RBQ6UXL0 311 aa4.25□□□□□ -1.73
CDC42BPA-212ENST00000478573 PRSS45Q7RTY3 260 aa4.25□□□□□ -1.73
CDC42BPA-212ENST00000478573 CPLX4Q7Z7G2 160 aa4.25□□□□□ -1.73
CDC42BPA-212ENST00000478573 GHDCQ8N2G8 530 aa4.25□□□□□ -1.73
CDC42BPA-212ENST00000478573 KAT2AQ92830 837 aa4.25□□□□□ -1.73
CDC42BPA-212ENST00000478573 MED30Q96HR3 178 aa4.25□□□□□ -1.73
CDC42BPA-212ENST00000478573 MEIS3Q99687 375 aa4.25□□□□□ -1.73
CDC42BPA-212ENST00000478573 TMX4Q9H1E5 349 aaPredicted RBP4.25□□□□□ -1.73
CDC42BPA-212ENST00000478573 ACTR5Q9H9F9 607 aaPredicted RBP4.25□□□□□ -1.73
CDC42BPA-212ENST00000478573 DIAPH3Q9NSV4 1193 aa4.25□□□□□ -1.73
CDC42BPA-212ENST00000478573 NSMCE4AQ9NXX6 385 aa4.25□□□□□ -1.73
CDC42BPA-212ENST00000478573 SELENONQ9NZV5 590 aa4.25□□□□□ -1.73
CDC42BPA-212ENST00000478573 NLKQ9UBE8 527 aa4.25□□□□□ -1.73
CDC42BPA-212ENST00000478573 PIAS3Q9Y6X2 628 aa4.25□□□□□ -1.73
CDC42BPA-212ENST00000478573 NRAPQ86VF7 1730 aa4.24□□□□□ -1.73
CDC42BPA-212ENST00000478573 TEX13CA0A0J9YWL9 993 aa4.24□□□□□ -1.73
CDC42BPA-212ENST00000478573 ARHGAP10A1A4S6 786 aa4.24□□□□□ -1.73
CDC42BPA-212ENST00000478573 IFITM10A6NMD0 228 aa4.24□□□□□ -1.73
CDC42BPA-212ENST00000478573 MLYCDO95822 493 aa4.24□□□□□ -1.73
CDC42BPA-212ENST00000478573 GALTP07902 379 aa4.24□□□□□ -1.73
CDC42BPA-212ENST00000478573 CPOXP36551 454 aa4.24□□□□□ -1.73
CDC42BPA-212ENST00000478573 MLH1P40692 756 aa4.24□□□□□ -1.73
CDC42BPA-212ENST00000478573 ENTPD1P49961 510 aa4.24□□□□□ -1.73
CDC42BPA-212ENST00000478573 RARSP54136 660 aaKnown RBP4.24□□□□□ -1.73
CDC42BPA-212ENST00000478573 RPS3AP61247 264 aaKnown RBP4.24□□□□□ -1.73
CDC42BPA-212ENST00000478573 CYP4A11Q02928 519 aa4.24□□□□□ -1.73
CDC42BPA-212ENST00000478573 MAMLD1Q13495 774 aa4.24□□□□□ -1.73
CDC42BPA-212ENST00000478573 DCTN2Q13561 401 aaKnown RBP4.24□□□□□ -1.73
CDC42BPA-212ENST00000478573 NFATC4Q14934 902 aa4.24□□□□□ -1.73
CDC42BPA-212ENST00000478573 FAM205BPQ63HN1 556 aa4.24□□□□□ -1.73
CDC42BPA-212ENST00000478573 HMBOX1Q6NT76 420 aa4.24□□□□□ -1.73
CDC42BPA-212ENST00000478573 USP43Q70EL4 1123 aa4.24□□□□□ -1.73
CDC42BPA-212ENST00000478573 CYB5R4Q7L1T6 521 aa4.24□□□□□ -1.73
CDC42BPA-212ENST00000478573 TADA2BQ86TJ2 420 aa4.24□□□□□ -1.73
CDC42BPA-212ENST00000478573 FAM160B2Q86V87 743 aa4.24□□□□□ -1.73
CDC42BPA-212ENST00000478573 WDR5BQ86VZ2 330 aa4.24□□□□□ -1.73
CDC42BPA-212ENST00000478573 NR2C2APQ86WQ0 139 aa4.24□□□□□ -1.73
CDC42BPA-212ENST00000478573 SPATA2LQ8IUW3 424 aaPredicted RBP4.24□□□□□ -1.73
CDC42BPA-212ENST00000478573 DDIASQ8IXT1 998 aa4.24□□□□□ -1.73
CDC42BPA-212ENST00000478573 CCDC105Q8IYK2 499 aa4.24□□□□□ -1.73
CDC42BPA-212ENST00000478573 IQCF1Q8N6M8 205 aa4.24□□□□□ -1.73
CDC42BPA-212ENST00000478573 DNAAF1Q8NEP3 725 aa4.24□□□□□ -1.73
CDC42BPA-212ENST00000478573 KCNG4Q8TDN1 519 aa4.24□□□□□ -1.73
CDC42BPA-212ENST00000478573 TMEM174Q8WUU8 243 aa4.24□□□□□ -1.73
CDC42BPA-212ENST00000478573 NUDCD2Q8WVJ2 157 aa4.24□□□□□ -1.73
CDC42BPA-212ENST00000478573 KLHL15Q96M94 604 aa4.24□□□□□ -1.73
CDC42BPA-212ENST00000478573 TIGD1Q96MW7 591 aa4.24□□□□□ -1.73
CDC42BPA-212ENST00000478573 ITPAQ9BY32 194 aa4.24□□□□□ -1.73
CDC42BPA-212ENST00000478573 HIPK3Q9H422 1215 aa4.24□□□□□ -1.73
CDC42BPA-212ENST00000478573 SLC32A1Q9H598 525 aa4.24□□□□□ -1.73
CDC42BPA-212ENST00000478573 CXorf56Q9H5V9 222 aa4.24□□□□□ -1.73
CDC42BPA-212ENST00000478573 C20orf141Q9NUB4 165 aa4.24□□□□□ -1.73
CDC42BPA-212ENST00000478573 KIAA1456Q9P272 454 aa4.24□□□□□ -1.73
CDC42BPA-212ENST00000478573 CDH22Q9UJ99 828 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms