RNA–Protein interactions for RNA: ENST00000477558.1

VPS45-207, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,425 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-207ENST00000477558 UBXN2BQ14CS0 331 aa5.46□□□□□ -1.54
VPS45-207ENST00000477558 VEPH1Q14D04 833 aa5.46□□□□□ -1.54
VPS45-207ENST00000477558 MLC1Q15049 377 aa5.46□□□□□ -1.54
VPS45-207ENST00000477558 USP39Q53GS9 565 aaKnown RBP5.46□□□□□ -1.54
VPS45-207ENST00000477558 STXBP5Q5T5C0 1151 aa5.46□□□□□ -1.54
VPS45-207ENST00000477558 ATXN7L2Q5T6C5 722 aaPredicted RBP5.46□□□□□ -1.54
VPS45-207ENST00000477558 KLHDC7AQ5VTJ3 777 aa5.46□□□□□ -1.54
VPS45-207ENST00000477558 SDHAF4Q5VUM1 108 aa5.46□□□□□ -1.54
VPS45-207ENST00000477558 GJB7Q6PEY0 223 aa5.46□□□□□ -1.54
VPS45-207ENST00000477558 TMEM270Q6UE05 265 aa5.46□□□□□ -1.54
VPS45-207ENST00000477558 LCLAT1Q6UWP7 414 aa5.46□□□□□ -1.54
VPS45-207ENST00000477558 DENND5BQ6ZUT9 1274 aa5.46□□□□□ -1.54
VPS45-207ENST00000477558 HTR3DQ70Z44 454 aa5.46□□□□□ -1.54
VPS45-207ENST00000477558 C14orf80Q86SX3 495 aa5.46□□□□□ -1.54
VPS45-207ENST00000477558 PLXDC1Q8IUK5 500 aa5.46□□□□□ -1.54
VPS45-207ENST00000477558 FAM71AQ8IYT1 594 aa5.46□□□□□ -1.54
VPS45-207ENST00000477558 SCML4Q8N228 414 aa5.46□□□□□ -1.54
VPS45-207ENST00000477558 ELMOD1Q8N336 334 aa5.46□□□□□ -1.54
VPS45-207ENST00000477558 ZNF276Q8N554 614 aa5.46□□□□□ -1.54
VPS45-207ENST00000477558 AOPEPQ8N6M6 819 aa5.46□□□□□ -1.54
VPS45-207ENST00000477558 ANKRD52Q8NB46 1076 aa5.46□□□□□ -1.54
VPS45-207ENST00000477558 STKLD1Q8NE28 680 aa5.46□□□□□ -1.54
VPS45-207ENST00000477558 OLIG1Q8TAK6 271 aa5.46□□□□□ -1.54
VPS45-207ENST00000477558 SLC35F5Q8WV83 523 aa5.46□□□□□ -1.54
VPS45-207ENST00000477558 OVCA2Q8WZ82 227 aa5.46□□□□□ -1.54
VPS45-207ENST00000477558 TFAP2BQ92481 460 aa5.46□□□□□ -1.54
VPS45-207ENST00000477558 ELSPBP1Q96BH3 223 aa5.46□□□□□ -1.54
VPS45-207ENST00000477558 RSPRY1Q96DX4 576 aa5.46□□□□□ -1.54
VPS45-207ENST00000477558 CLIP3Q96DZ5 547 aa5.46□□□□□ -1.54
VPS45-207ENST00000477558 RPGRIP1Q96KN7 1286 aa5.46□□□□□ -1.54
VPS45-207ENST00000477558 KCNK16Q96T55 309 aa5.46□□□□□ -1.54
VPS45-207ENST00000477558 CRACR2AQ9BSW2 395 aa5.46□□□□□ -1.54
VPS45-207ENST00000477558 DUSP16Q9BY84 665 aa5.46□□□□□ -1.54
VPS45-207ENST00000477558 TTYH3Q9C0H2 523 aa5.46□□□□□ -1.54
VPS45-207ENST00000477558 NAT10Q9H0A0 1025 aaKnown RBP5.46□□□□□ -1.54
VPS45-207ENST00000477558 SLC2A4RGQ9NR83 387 aa5.46□□□□□ -1.54
VPS45-207ENST00000477558 FAM49BQ9NUQ9 324 aa5.46□□□□□ -1.54
VPS45-207ENST00000477558 FBXO34Q9NWN3 711 aa5.46□□□□□ -1.54
VPS45-207ENST00000477558 TAB2Q9NYJ8 693 aa5.46□□□□□ -1.54
VPS45-207ENST00000477558 UXTQ9UBK9 157 aaPredicted RBP5.46□□□□□ -1.54
VPS45-207ENST00000477558 KIAA1257Q9ULG3 409 aa5.46□□□□□ -1.54
VPS45-207ENST00000477558 DUSP12Q9UNI6 340 aa5.46□□□□□ -1.54
VPS45-207ENST00000477558 TSC22D4Q9Y3Q8 395 aa5.46□□□□□ -1.54
VPS45-207ENST00000477558 PCDHA3Q9Y5H8 950 aa5.46□□□□□ -1.54
VPS45-207ENST00000477558 FRYLO94915 3013 aa5.46□□□□□ -1.54
VPS45-207ENST00000477558 SHISA7A6NL88 538 aa5.45□□□□□ -1.54
VPS45-207ENST00000477558 DRGXA6NNA5 263 aa5.45□□□□□ -1.54
VPS45-207ENST00000477558 F8VZ95 297 aa5.45□□□□□ -1.54
VPS45-207ENST00000477558 XPO1O14980 1071 aaKnown RBP5.45□□□□□ -1.54
VPS45-207ENST00000477558 DCXO43602 365 aa5.45□□□□□ -1.54
VPS45-207ENST00000477558 SETSIPP0DME0 302 aa5.45□□□□□ -1.54
VPS45-207ENST00000477558 SLC6A2P23975 617 aa5.45□□□□□ -1.54
VPS45-207ENST00000477558 ACRV1P26436 265 aa5.45□□□□□ -1.54
VPS45-207ENST00000477558 GABRR2P28476 465 aa5.45□□□□□ -1.54
VPS45-207ENST00000477558 CDH5P33151 784 aaPredicted RBP5.45□□□□□ -1.54
VPS45-207ENST00000477558 PPP3CCP48454 512 aa5.45□□□□□ -1.54
VPS45-207ENST00000477558 PGFP49763 221 aa5.45□□□□□ -1.54
VPS45-207ENST00000477558 BCAT1P54687 386 aa5.45□□□□□ -1.54
VPS45-207ENST00000477558 ZXDBP98169 803 aa5.45□□□□□ -1.54
VPS45-207ENST00000477558 LRMPQ12912 555 aa5.45□□□□□ -1.54
VPS45-207ENST00000477558 TEAD2Q15562 447 aa5.45□□□□□ -1.54
VPS45-207ENST00000477558 CNGA2Q16280 664 aa5.45□□□□□ -1.54
VPS45-207ENST00000477558 HSP90AA4PQ58FG1 418 aa5.45□□□□□ -1.54
VPS45-207ENST00000477558 FAM78AQ5JUQ0 283 aa5.45□□□□□ -1.54
VPS45-207ENST00000477558 CYP4A22Q5TCH4 519 aa5.45□□□□□ -1.54
VPS45-207ENST00000477558 NAIF1Q69YI7 327 aaPredicted RBP5.45□□□□□ -1.54
VPS45-207ENST00000477558 PM20D1Q6GTS8 502 aa5.45□□□□□ -1.54
VPS45-207ENST00000477558 CXorf57Q6NSI4 855 aaKnown RBP5.45□□□□□ -1.54
VPS45-207ENST00000477558 DRICH1Q6PGQ1 229 aaPredicted RBP5.45□□□□□ -1.54
VPS45-207ENST00000477558 PARM1Q6UWI2 310 aa5.45□□□□□ -1.54
VPS45-207ENST00000477558 SEM1Q6ZVN7 128 aa5.45□□□□□ -1.54
VPS45-207ENST00000477558 MTSS1LQ765P7 747 aa5.45□□□□□ -1.54
VPS45-207ENST00000477558 RRAGAQ7L523 313 aa5.45□□□□□ -1.54
VPS45-207ENST00000477558 CCDC186Q7Z3E2 898 aa5.45□□□□□ -1.54
VPS45-207ENST00000477558 GGNQ86UU5 652 aa5.45□□□□□ -1.54
VPS45-207ENST00000477558 MON1AQ86VX9 555 aa5.45□□□□□ -1.54
VPS45-207ENST00000477558 C1orf210Q8IVY1 113 aa5.45□□□□□ -1.54
VPS45-207ENST00000477558 WDR75Q8IWA0 830 aaKnown RBP5.45□□□□□ -1.54
VPS45-207ENST00000477558 NUP93Q8N1F7 819 aa5.45□□□□□ -1.54
VPS45-207ENST00000477558 MYO1HQ8N1T3 1032 aa5.45□□□□□ -1.54
VPS45-207ENST00000477558 C3orf20Q8ND61 904 aa5.45□□□□□ -1.54
VPS45-207ENST00000477558 OR10H5Q8NGA6 315 aa5.45□□□□□ -1.54
VPS45-207ENST00000477558 ZFP28Q8NHY6 868 aa5.45□□□□□ -1.54
VPS45-207ENST00000477558 SCAMP5Q8TAC9 235 aa5.45□□□□□ -1.54
VPS45-207ENST00000477558 IL17DQ8TAD2 202 aa5.45□□□□□ -1.54
VPS45-207ENST00000477558 PPP1R35Q8TAP8 253 aa5.45□□□□□ -1.54
VPS45-207ENST00000477558 SMARCD2Q92925 531 aa5.45□□□□□ -1.54
VPS45-207ENST00000477558 LRRC3BQ96PB8 259 aa5.45□□□□□ -1.54
VPS45-207ENST00000477558 CDK5RAP1Q96SZ6 601 aaKnown RBP5.45□□□□□ -1.54
VPS45-207ENST00000477558 SYT11Q9BT88 431 aa5.45□□□□□ -1.54
VPS45-207ENST00000477558 NDC1Q9BTX1 674 aa5.45□□□□□ -1.54
VPS45-207ENST00000477558 SLC46A2Q9BY10 475 aa5.45□□□□□ -1.54
VPS45-207ENST00000477558 C11orf54Q9H0W9 315 aaPredicted RBP5.45□□□□□ -1.54
VPS45-207ENST00000477558 TASP1Q9H6P5 420 aa5.45□□□□□ -1.54
VPS45-207ENST00000477558 TRPV5Q9NQA5 729 aa5.45□□□□□ -1.54
VPS45-207ENST00000477558 EHD2Q9NZN4 543 aa5.45□□□□□ -1.54
VPS45-207ENST00000477558 CALCOCO1Q9P1Z2 691 aa5.45□□□□□ -1.54
VPS45-207ENST00000477558 MUTYHQ9UIF7 546 aa5.45□□□□□ -1.54
VPS45-207ENST00000477558 TSPAN16Q9UKR8 245 aa5.45□□□□□ -1.54
VPS45-207ENST00000477558 SORCS3Q9UPU3 1222 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms