RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 PACSIN1Q9BY11 444 aa10.83□□□□□ -0.68
SEC13-214ENST00000476597 KLQ9UEF7 1012 aa10.83□□□□□ -0.68
SEC13-214ENST00000476597 LCMT1Q9UIC8 334 aa10.83□□□□□ -0.68
SEC13-214ENST00000476597 PADI4Q9UM07 663 aa10.83□□□□□ -0.68
SEC13-214ENST00000476597 PPIL1Q9Y3C6 166 aa10.83□□□□□ -0.68
SEC13-214ENST00000476597 DGKBQ9Y6T7 804 aa10.83□□□□□ -0.68
SEC13-214ENST00000476597 KALRNO60229 2985 aa10.82□□□□□ -0.68
SEC13-214ENST00000476597 TMEM202A6NGA9 273 aa10.82□□□□□ -0.68
SEC13-214ENST00000476597 CACNB4O00305 520 aaPredicted RBP10.82□□□□□ -0.68
SEC13-214ENST00000476597 TNFRSF10CO14798 259 aa10.82□□□□□ -0.68
SEC13-214ENST00000476597 MATN3O15232 486 aa10.82□□□□□ -0.68
SEC13-214ENST00000476597 FZD6O60353 706 aa10.82□□□□□ -0.68
SEC13-214ENST00000476597 BRINP1O60477 761 aa10.82□□□□□ -0.68
SEC13-214ENST00000476597 USP12O75317 370 aa10.82□□□□□ -0.68
SEC13-214ENST00000476597 CSO75390 466 aaKnown RBP10.82□□□□□ -0.68
SEC13-214ENST00000476597 HEXIM1O94992 359 aaKnown RBP10.82□□□□□ -0.68
SEC13-214ENST00000476597 CPP00450 1065 aa10.82□□□□□ -0.68
SEC13-214ENST00000476597 KRT7P08729 469 aa10.82□□□□□ -0.68
SEC13-214ENST00000476597 CYP2A6P11509 494 aaPredicted RBP10.82□□□□□ -0.68
SEC13-214ENST00000476597 KELP23276 732 aa10.82□□□□□ -0.68
SEC13-214ENST00000476597 NFKBIAP25963 317 aa10.82□□□□□ -0.68
SEC13-214ENST00000476597 VIPR1P32241 457 aa10.82□□□□□ -0.68
SEC13-214ENST00000476597 ACTN2P35609 894 aa10.82□□□□□ -0.68
SEC13-214ENST00000476597 GARSP41250 739 aaKnown RBP10.82□□□□□ -0.68
SEC13-214ENST00000476597 LSSP48449 732 aa10.82□□□□□ -0.68
SEC13-214ENST00000476597 TAS2R40P59535 323 aa10.82□□□□□ -0.68
SEC13-214ENST00000476597 KIAA1024LP59773 190 aa10.82□□□□□ -0.68
SEC13-214ENST00000476597 GALNT2Q10471 571 aa10.82□□□□□ -0.68
SEC13-214ENST00000476597 TRAF2Q12933 501 aa10.82□□□□□ -0.68
SEC13-214ENST00000476597 TRIM14Q14142 442 aa10.82□□□□□ -0.68
SEC13-214ENST00000476597 ACOX1Q15067 660 aa10.82□□□□□ -0.68
SEC13-214ENST00000476597 PDK2Q15119 407 aa10.82□□□□□ -0.68
SEC13-214ENST00000476597 CNGA3Q16281 694 aa10.82□□□□□ -0.68
SEC13-214ENST00000476597 ANKRD20A8PQ5CZ79 823 aa10.82□□□□□ -0.68
SEC13-214ENST00000476597 KCTD16Q68DU8 428 aa10.82□□□□□ -0.68
SEC13-214ENST00000476597 NCBP2-AS2Q69YL0 99 aa10.82□□□□□ -0.68
SEC13-214ENST00000476597 PNCKQ6P2M8 343 aa10.82□□□□□ -0.68
SEC13-214ENST00000476597 OGFOD3Q6PK18 319 aa10.82□□□□□ -0.68
SEC13-214ENST00000476597 GKN2Q86XP6 184 aa10.82□□□□□ -0.68
SEC13-214ENST00000476597 MAP7D3Q8IWC1 876 aa10.82□□□□□ -0.68
SEC13-214ENST00000476597 LSMEM2Q8N112 164 aa10.82□□□□□ -0.68
SEC13-214ENST00000476597 PELI3Q8N2H9 469 aa10.82□□□□□ -0.68
SEC13-214ENST00000476597 OR56A4Q8NGH8 313 aa10.82□□□□□ -0.68
SEC13-214ENST00000476597 SNIP1Q8TAD8 396 aaKnown RBP10.82□□□□□ -0.68
SEC13-214ENST00000476597 WDR48Q8TAF3 677 aa10.82□□□□□ -0.68
SEC13-214ENST00000476597 PDCD6IPQ8WUM4 868 aaKnown RBP10.82□□□□□ -0.68
SEC13-214ENST00000476597 PIH1D2Q8WWB5 315 aa10.82□□□□□ -0.68
SEC13-214ENST00000476597 CTNNBL1Q8WYA6 563 aaPredicted RBP10.82□□□□□ -0.68
SEC13-214ENST00000476597 OR1E3Q8WZA6 343 aa10.82□□□□□ -0.68
SEC13-214ENST00000476597 MAML1Q92585 1016 aa10.82□□□□□ -0.68
SEC13-214ENST00000476597 NAT6Q93015 286 aa10.82□□□□□ -0.68
SEC13-214ENST00000476597 FATE1Q969F0 183 aa10.82□□□□□ -0.68
SEC13-214ENST00000476597 GRAMD1AQ96CP6 724 aa10.82□□□□□ -0.68
SEC13-214ENST00000476597 FAF2Q96CS3 445 aa10.82□□□□□ -0.68
SEC13-214ENST00000476597 TSGA13Q96PP4 275 aa10.82□□□□□ -0.68
SEC13-214ENST00000476597 RBM15Q96T37 977 aaKnown RBP eCLIP10.82□□□□□ -0.68
SEC13-214ENST00000476597 ZNF670Q9BS34 389 aa10.82□□□□□ -0.68
SEC13-214ENST00000476597 LGR4Q9BXB1 951 aa10.82□□□□□ -0.68
SEC13-214ENST00000476597 KCTD5Q9NXV2 234 aa10.82□□□□□ -0.68
SEC13-214ENST00000476597 GULP1Q9UBP9 304 aa10.82□□□□□ -0.68
SEC13-214ENST00000476597 DOLKQ9UPQ8 538 aa10.82□□□□□ -0.68
SEC13-214ENST00000476597 RAI2Q9Y5P3 530 aa10.82□□□□□ -0.68
SEC13-214ENST00000476597 ASXL3Q9C0F0 2248 aa10.82□□□□□ -0.68
SEC13-214ENST00000476597 PSMD11O00231 422 aa10.81□□□□□ -0.68
SEC13-214ENST00000476597 MFSD11O43934 449 aa10.81□□□□□ -0.68
SEC13-214ENST00000476597 TCEA3O75764 348 aa10.81□□□□□ -0.68
SEC13-214ENST00000476597 DXOO77932 396 aaKnown RBP10.81□□□□□ -0.68
SEC13-214ENST00000476597 PGLSO95336 258 aa10.81□□□□□ -0.68
SEC13-214ENST00000476597 MPOP05164 745 aa10.81□□□□□ -0.68
SEC13-214ENST00000476597 TMEM253P0C7T8 217 aa10.81□□□□□ -0.68
SEC13-214ENST00000476597 CES1P23141 567 aa10.81□□□□□ -0.68
SEC13-214ENST00000476597 CCNCP24863 283 aa10.81□□□□□ -0.68
SEC13-214ENST00000476597 ITPKBP27987 946 aa10.81□□□□□ -0.68
SEC13-214ENST00000476597 IHHQ14623 411 aa10.81□□□□□ -0.68
SEC13-214ENST00000476597 IFI16Q16666 785 aaKnown RBP10.81□□□□□ -0.68
SEC13-214ENST00000476597 TBC1D25Q3MII6 688 aa10.81□□□□□ -0.68
SEC13-214ENST00000476597 ARMC12Q5T9G4 340 aa10.81□□□□□ -0.68
SEC13-214ENST00000476597 CRTC1Q6UUV9 634 aa10.81□□□□□ -0.68
SEC13-214ENST00000476597 LRRC69Q6ZNQ3 347 aa10.81□□□□□ -0.68
SEC13-214ENST00000476597 TECPR1Q7Z6L1 1165 aa10.81□□□□□ -0.68
SEC13-214ENST00000476597 VSTM4Q8IW00 320 aa10.81□□□□□ -0.68
SEC13-214ENST00000476597 PQLC3Q8N755 202 aa10.81□□□□□ -0.68
SEC13-214ENST00000476597 ARL10Q8N8L6 244 aa10.81□□□□□ -0.68
SEC13-214ENST00000476597 PDXPQ96GD0 296 aa10.81□□□□□ -0.68
SEC13-214ENST00000476597 ZNF578Q96N58 590 aaPredicted RBP10.81□□□□□ -0.68
SEC13-214ENST00000476597 DCBLD2Q96PD2 775 aa10.81□□□□□ -0.68
SEC13-214ENST00000476597 MCCC1Q96RQ3 725 aaPredicted RBP10.81□□□□□ -0.68
SEC13-214ENST00000476597 CHP1Q99653 195 aa10.81□□□□□ -0.68
SEC13-214ENST00000476597 SEMA3CQ99985 751 aa10.81□□□□□ -0.68
SEC13-214ENST00000476597 CCDC3Q9BQI4 270 aa10.81□□□□□ -0.68
SEC13-214ENST00000476597 TEX101Q9BY14 249 aa10.81□□□□□ -0.68
SEC13-214ENST00000476597 POLR1EQ9GZS1 481 aaKnown RBP10.81□□□□□ -0.68
SEC13-214ENST00000476597 WDR26Q9H7D7 661 aa10.81□□□□□ -0.68
SEC13-214ENST00000476597 POLR1BQ9H9Y6 1135 aa10.81□□□□□ -0.68
SEC13-214ENST00000476597 FGF22Q9HCT0 170 aa10.81□□□□□ -0.68
SEC13-214ENST00000476597 NT5MQ9NPB1 228 aa10.81□□□□□ -0.68
SEC13-214ENST00000476597 MRPL40Q9NQ50 206 aaKnown RBP10.81□□□□□ -0.68
SEC13-214ENST00000476597 ZNHIT6Q9NWK9 470 aaKnown RBP10.81□□□□□ -0.68
SEC13-214ENST00000476597 AMACRQ9UHK6 382 aa10.81□□□□□ -0.68
SEC13-214ENST00000476597 GPR34Q9UPC5 381 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms