RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 SCRN2Q96FV2 425 aa10.25□□□□□ -0.77
CCM2-208ENST00000476594 RBM41Q96IZ5 413 aaKnown RBP10.25□□□□□ -0.77
CCM2-208ENST00000476594 WDR92Q96MX6 357 aa10.25□□□□□ -0.77
CCM2-208ENST00000476594 APOOQ9BUR5 198 aa10.25□□□□□ -0.77
CCM2-208ENST00000476594 ABCG4Q9H172 646 aa10.25□□□□□ -0.77
CCM2-208ENST00000476594 CCDC86Q9H6F5 360 aaKnown RBP10.25□□□□□ -0.77
CCM2-208ENST00000476594 PHPT1Q9NRX4 125 aaPredicted RBP10.25□□□□□ -0.77
CCM2-208ENST00000476594 DTLQ9NZJ0 730 aa10.25□□□□□ -0.77
CCM2-208ENST00000476594 SALL4Q9UJQ4 1053 aa10.25□□□□□ -0.77
CCM2-208ENST00000476594 RPL26L1Q9UNX3 145 aaKnown RBP10.25□□□□□ -0.77
CCM2-208ENST00000476594 PCDHA13Q9Y5I0 950 aa10.25□□□□□ -0.77
CCM2-208ENST00000476594 HEY1Q9Y5J3 304 aa10.25□□□□□ -0.77
CCM2-208ENST00000476594 RAI2Q9Y5P3 530 aa10.25□□□□□ -0.77
CCM2-208ENST00000476594 DOCK9Q9BZ29 2069 aa10.24□□□□□ -0.77
CCM2-208ENST00000476594 LMO7DNF2Z398 122 aa10.24□□□□□ -0.77
CCM2-208ENST00000476594 K7ESM1 405 aa10.24□□□□□ -0.77
CCM2-208ENST00000476594 TNFRSF10CO14798 259 aa10.24□□□□□ -0.77
CCM2-208ENST00000476594 MTSS1O43312 755 aa10.24□□□□□ -0.77
CCM2-208ENST00000476594 ZNF189O75820 626 aaPredicted RBP10.24□□□□□ -0.77
CCM2-208ENST00000476594 HEXIM1O94992 359 aaKnown RBP10.24□□□□□ -0.77
CCM2-208ENST00000476594 TNFP01375 233 aa10.24□□□□□ -0.77
CCM2-208ENST00000476594 HOXC4P09017 264 aaPredicted RBP10.24□□□□□ -0.77
CCM2-208ENST00000476594 CKMT1AP12532 417 aa10.24□□□□□ -0.77
CCM2-208ENST00000476594 TNNT1P13805 278 aa10.24□□□□□ -0.77
CCM2-208ENST00000476594 ITIH2P19823 946 aa10.24□□□□□ -0.77
CCM2-208ENST00000476594 COMTP21964 271 aa10.24□□□□□ -0.77
CCM2-208ENST00000476594 HK3P52790 923 aa10.24□□□□□ -0.77
CCM2-208ENST00000476594 GBE1Q04446 702 aa10.24□□□□□ -0.77
CCM2-208ENST00000476594 PPIDQ08752 370 aaKnown RBP10.24□□□□□ -0.77
CCM2-208ENST00000476594 AP1B1Q10567 949 aa10.24□□□□□ -0.77
CCM2-208ENST00000476594 TRAF2Q12933 501 aa10.24□□□□□ -0.77
CCM2-208ENST00000476594 RALGDSQ12967 914 aa10.24□□□□□ -0.77
CCM2-208ENST00000476594 INPP5AQ14642 412 aa10.24□□□□□ -0.77
CCM2-208ENST00000476594 NR0B2Q15466 257 aa10.24□□□□□ -0.77
CCM2-208ENST00000476594 SLC9A4Q6AI14 798 aa10.24□□□□□ -0.77
CCM2-208ENST00000476594 CCDC70Q6NSX1 233 aa10.24□□□□□ -0.77
CCM2-208ENST00000476594 C11orf63Q6NUN7 778 aa10.24□□□□□ -0.77
CCM2-208ENST00000476594 LVRNQ6Q4G3 990 aa10.24□□□□□ -0.77
CCM2-208ENST00000476594 ENPP7Q6UWV6 458 aa10.24□□□□□ -0.77
CCM2-208ENST00000476594 DAAM2Q86T65 1068 aa10.24□□□□□ -0.77
CCM2-208ENST00000476594 ZSWIM9Q86XI8 627 aa10.24□□□□□ -0.77
CCM2-208ENST00000476594 HID1Q8IV36 788 aa10.24□□□□□ -0.77
CCM2-208ENST00000476594 CCDC50Q8IVM0 306 aa10.24□□□□□ -0.77
CCM2-208ENST00000476594 CACTIN-AS1Q8N1I8 211 aa10.24□□□□□ -0.77
CCM2-208ENST00000476594 SLC25A45Q8N413 288 aa10.24□□□□□ -0.77
CCM2-208ENST00000476594 PGBD5Q8N414 524 aa10.24□□□□□ -0.77
CCM2-208ENST00000476594 PQLC3Q8N755 202 aa10.24□□□□□ -0.77
CCM2-208ENST00000476594 OR6C4Q8NGE1 309 aa10.24□□□□□ -0.77
CCM2-208ENST00000476594 OR56A4Q8NGH8 313 aa10.24□□□□□ -0.77
CCM2-208ENST00000476594 CCHCR1Q8TD31 782 aa10.24□□□□□ -0.77
CCM2-208ENST00000476594 RAPGEF5Q92565 580 aa10.24□□□□□ -0.77
CCM2-208ENST00000476594 NXPE2Q96DL1 559 aa10.24□□□□□ -0.77
CCM2-208ENST00000476594 APOLD1Q96LR9 279 aa10.24□□□□□ -0.77
CCM2-208ENST00000476594 ADGRE3Q9BY15 652 aa10.24□□□□□ -0.77
CCM2-208ENST00000476594 MBNL1Q9NR56 388 aaKnown RBP10.24□□□□□ -0.77
CCM2-208ENST00000476594 UCKL1Q9NWZ5 548 aa10.24□□□□□ -0.77
CCM2-208ENST00000476594 MAP1BP46821 2468 aaKnown RBP10.24□□□□□ -0.77
CCM2-208ENST00000476594 ANKRD36A6QL64 1941 aa10.23□□□□□ -0.77
CCM2-208ENST00000476594 CACNA1BQ00975 2339 aa10.23□□□□□ -0.77
CCM2-208ENST00000476594 GOLGA6CA6NDK9 693 aa10.23□□□□□ -0.77
CCM2-208ENST00000476594 GOLGA6BA6NDN3 693 aa10.23□□□□□ -0.77
CCM2-208ENST00000476594 TRIM38O00635 465 aa10.23□□□□□ -0.77
CCM2-208ENST00000476594 ZRANB2O95218 330 aaKnown RBP eCLIP10.23□□□□□ -0.77
CCM2-208ENST00000476594 NDUFA10O95299 355 aa10.23□□□□□ -0.77
CCM2-208ENST00000476594 MAP3K6O95382 1288 aa10.23□□□□□ -0.77
CCM2-208ENST00000476594 PRKCGP05129 697 aa10.23□□□□□ -0.77
CCM2-208ENST00000476594 GOLGA6DP0CG33 693 aa10.23□□□□□ -0.77
CCM2-208ENST00000476594 TGM2P21980 687 aa10.23□□□□□ -0.77
CCM2-208ENST00000476594 TEAD1P28347 426 aa10.23□□□□□ -0.77
CCM2-208ENST00000476594 SRP54P61011 504 aaKnown RBP10.23□□□□□ -0.77
CCM2-208ENST00000476594 IFI35P80217 286 aaPredicted RBP10.23□□□□□ -0.77
CCM2-208ENST00000476594 EIF2B5Q13144 721 aaKnown RBP10.23□□□□□ -0.77
CCM2-208ENST00000476594 CNGA3Q16281 694 aa10.23□□□□□ -0.77
CCM2-208ENST00000476594 DEFB133Q30KQ1 61 aa10.23□□□□□ -0.77
CCM2-208ENST00000476594 TFDP3Q5H9I0 405 aa10.23□□□□□ -0.77
CCM2-208ENST00000476594 C6orf132Q5T0Z8 1188 aa10.23□□□□□ -0.77
CCM2-208ENST00000476594 HES3Q5TGS1 186 aa10.23□□□□□ -0.77
CCM2-208ENST00000476594 CCDC181Q5TID7 509 aa10.23□□□□□ -0.77
CCM2-208ENST00000476594 DENND2CQ68D51 928 aa10.23□□□□□ -0.77
CCM2-208ENST00000476594 RAET1GQ6H3X3 334 aa10.23□□□□□ -0.77
CCM2-208ENST00000476594 RD3Q7Z3Z2 195 aa10.23□□□□□ -0.77
CCM2-208ENST00000476594 PLD5Q8N7P1 536 aa10.23□□□□□ -0.77
CCM2-208ENST00000476594 P3H4Q92791 437 aa10.23□□□□□ -0.77
CCM2-208ENST00000476594 RNF25Q96BH1 459 aaPredicted RBP10.23□□□□□ -0.77
CCM2-208ENST00000476594 DTD2Q96FN9 168 aa10.23□□□□□ -0.77
CCM2-208ENST00000476594 DEPDC7Q96QD5 511 aa10.23□□□□□ -0.77
CCM2-208ENST00000476594 MCCC1Q96RQ3 725 aaPredicted RBP10.23□□□□□ -0.77
CCM2-208ENST00000476594 SRPK1Q96SB4 655 aaKnown RBP10.23□□□□□ -0.77
CCM2-208ENST00000476594 TDRD1Q9BXT4 1180 aaKnown RBP10.23□□□□□ -0.77
CCM2-208ENST00000476594 RBSNQ9H1K0 784 aa10.23□□□□□ -0.77
CCM2-208ENST00000476594 PCDH9Q9HC56 1237 aa10.23□□□□□ -0.77
CCM2-208ENST00000476594 GOLGA6AQ9NYA3 693 aa10.23□□□□□ -0.77
CCM2-208ENST00000476594 IMPACTQ9P2X3 320 aa10.23□□□□□ -0.77
CCM2-208ENST00000476594 MOSPD1Q9UJG1 213 aa10.23□□□□□ -0.77
CCM2-208ENST00000476594 CLCA2Q9UQC9 943 aa10.23□□□□□ -0.77
CCM2-208ENST00000476594 PPIL1Q9Y3C6 166 aa10.23□□□□□ -0.77
CCM2-208ENST00000476594 OR1A2Q9Y585 309 aa10.23□□□□□ -0.77
CCM2-208ENST00000476594 ALG6Q9Y672 507 aa10.23□□□□□ -0.77
CCM2-208ENST00000476594 EPN1Q9Y6I3 576 aaPredicted RBP10.23□□□□□ -0.77
CCM2-208ENST00000476594 DGKBQ9Y6T7 804 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms