RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 RNF157Q96PX1 679 aa16.27■□□□□ 0.2
COL1A1-205ENST00000476387 IL12RB2Q99665 862 aa16.27■□□□□ 0.2
COL1A1-205ENST00000476387 MAK16Q9BXY0 300 aaKnown RBP16.27■□□□□ 0.2
COL1A1-205ENST00000476387 ABCG4Q9H172 646 aa16.27■□□□□ 0.2
COL1A1-205ENST00000476387 NT5MQ9NPB1 228 aa16.27■□□□□ 0.2
COL1A1-205ENST00000476387 MBNL1Q9NR56 388 aaKnown RBP16.27■□□□□ 0.2
COL1A1-205ENST00000476387 TTLL3Q9Y4R7 772 aa16.27■□□□□ 0.2
COL1A1-205ENST00000476387 TTC24A2A3L6 582 aaPredicted RBP16.26■□□□□ 0.19
COL1A1-205ENST00000476387 EME2A4GXA9 379 aaPredicted RBP16.26■□□□□ 0.19
COL1A1-205ENST00000476387 SOWAHDA6NJG2 315 aa16.26■□□□□ 0.19
COL1A1-205ENST00000476387 LMO7DNF2Z398 122 aa16.26■□□□□ 0.19
COL1A1-205ENST00000476387 APOL1O14791 398 aa16.26■□□□□ 0.19
COL1A1-205ENST00000476387 CPP00450 1065 aa16.26■□□□□ 0.19
COL1A1-205ENST00000476387 PRKCGP05129 697 aa16.26■□□□□ 0.19
COL1A1-205ENST00000476387 ELFN1P0C7U0 828 aa16.26■□□□□ 0.19
COL1A1-205ENST00000476387 CR2P20023 1033 aa16.26■□□□□ 0.19
COL1A1-205ENST00000476387 COMTP21964 271 aa16.26■□□□□ 0.19
COL1A1-205ENST00000476387 ACTN2P35609 894 aa16.26■□□□□ 0.19
COL1A1-205ENST00000476387 RPIAP49247 311 aa16.26■□□□□ 0.19
COL1A1-205ENST00000476387 LIG3P49916 1009 aa16.26■□□□□ 0.19
COL1A1-205ENST00000476387 HADHBP55084 474 aaKnown RBP16.26■□□□□ 0.19
COL1A1-205ENST00000476387 GBE1Q04446 702 aa16.26■□□□□ 0.19
COL1A1-205ENST00000476387 ITKQ08881 620 aa16.26■□□□□ 0.19
COL1A1-205ENST00000476387 LRRC14Q15048 493 aa16.26■□□□□ 0.19
COL1A1-205ENST00000476387 AGERQ15109 404 aa16.26■□□□□ 0.19
COL1A1-205ENST00000476387 IRF4Q15306 451 aa16.26■□□□□ 0.19
COL1A1-205ENST00000476387 NR0B2Q15466 257 aa16.26■□□□□ 0.19
COL1A1-205ENST00000476387 WSCD2Q2TBF2 565 aa16.26■□□□□ 0.19
COL1A1-205ENST00000476387 DEFB133Q30KQ1 61 aa16.26■□□□□ 0.19
COL1A1-205ENST00000476387 TBC1D25Q3MII6 688 aa16.26■□□□□ 0.19
COL1A1-205ENST00000476387 LRRC69Q6ZNQ3 347 aa16.26■□□□□ 0.19
COL1A1-205ENST00000476387 PGBD5Q8N414 524 aa16.26■□□□□ 0.19
COL1A1-205ENST00000476387 CCNYQ8ND76 341 aa16.26■□□□□ 0.19
COL1A1-205ENST00000476387 TPCN2Q8NHX9 752 aa16.26■□□□□ 0.19
COL1A1-205ENST00000476387 MAPK15Q8TD08 544 aa16.26■□□□□ 0.19
COL1A1-205ENST00000476387 GLMNQ92990 594 aa16.26■□□□□ 0.19
COL1A1-205ENST00000476387 BOCQ9BWV1 1114 aa16.26■□□□□ 0.19
COL1A1-205ENST00000476387 SLC13A1Q9BZW2 595 aa16.26■□□□□ 0.19
COL1A1-205ENST00000476387 POLR1EQ9GZS1 481 aaKnown RBP16.26■□□□□ 0.19
COL1A1-205ENST00000476387 NOD2Q9HC29 1040 aa16.26■□□□□ 0.19
COL1A1-205ENST00000476387 COQ6Q9Y2Z9 468 aa16.26■□□□□ 0.19
COL1A1-205ENST00000476387 HYOU1Q9Y4L1 999 aa16.26■□□□□ 0.19
COL1A1-205ENST00000476387 BAHCC1Q9P281 2608 aa16.26■□□□□ 0.19
COL1A1-205ENST00000476387 A0A0A6YYK5 440 aaPredicted RBP16.25■□□□□ 0.19
COL1A1-205ENST00000476387 CFAP69A5D8W1 941 aa16.25■□□□□ 0.19
COL1A1-205ENST00000476387 TRAFD1O14545 582 aaPredicted RBP16.25■□□□□ 0.19
COL1A1-205ENST00000476387 MATN3O15232 486 aa16.25■□□□□ 0.19
COL1A1-205ENST00000476387 PSTPIP1O43586 416 aa16.25■□□□□ 0.19
COL1A1-205ENST00000476387 NDUFA10O95299 355 aa16.25■□□□□ 0.19
COL1A1-205ENST00000476387 MYF5P13349 255 aa16.25■□□□□ 0.19
COL1A1-205ENST00000476387 ZFXP17010 805 aaPredicted RBP16.25■□□□□ 0.19
COL1A1-205ENST00000476387 CCNCP24863 283 aa16.25■□□□□ 0.19
COL1A1-205ENST00000476387 BLKP51451 505 aa16.25■□□□□ 0.19
COL1A1-205ENST00000476387 PPARDQ03181 441 aa16.25■□□□□ 0.19
COL1A1-205ENST00000476387 CDKN3Q16667 212 aa16.25■□□□□ 0.19
COL1A1-205ENST00000476387 PRRT3Q5FWE3 981 aa16.25■□□□□ 0.19
COL1A1-205ENST00000476387 RFX6Q8HWS3 928 aa16.25■□□□□ 0.19
COL1A1-205ENST00000476387 RBFAQ8N0V3 343 aa16.25■□□□□ 0.19
COL1A1-205ENST00000476387 FSTL5Q8N475 847 aaPredicted RBP16.25■□□□□ 0.19
COL1A1-205ENST00000476387 TEX26Q8N6G2 289 aa16.25■□□□□ 0.19
COL1A1-205ENST00000476387 FATE1Q969F0 183 aa16.25■□□□□ 0.19
COL1A1-205ENST00000476387 GRAMD1AQ96CP6 724 aa16.25■□□□□ 0.19
COL1A1-205ENST00000476387 HDAC11Q96DB2 347 aa16.25■□□□□ 0.19
COL1A1-205ENST00000476387 TSGA13Q96PP4 275 aa16.25■□□□□ 0.19
COL1A1-205ENST00000476387 LRRC61Q9BV99 259 aa16.25■□□□□ 0.19
COL1A1-205ENST00000476387 DTLQ9NZJ0 730 aa16.25■□□□□ 0.19
COL1A1-205ENST00000476387 AMACRQ9UHK6 382 aa16.25■□□□□ 0.19
COL1A1-205ENST00000476387 PNMA8BQ9ULN7 279 aaPredicted RBP16.25■□□□□ 0.19
COL1A1-205ENST00000476387 PCDHB1Q9Y5F3 818 aa16.25■□□□□ 0.19
COL1A1-205ENST00000476387 PCDHGC4Q9Y5F7 938 aa16.25■□□□□ 0.19
COL1A1-205ENST00000476387 HEY1Q9Y5J3 304 aa16.25■□□□□ 0.19
COL1A1-205ENST00000476387 EPN1Q9Y6I3 576 aaPredicted RBP16.25■□□□□ 0.19
COL1A1-205ENST00000476387 LRP4O75096 1905 aa16.25■□□□□ 0.19
COL1A1-205ENST00000476387 C3orf70A6NLC5 250 aaPredicted RBP16.24■□□□□ 0.19
COL1A1-205ENST00000476387 GOLGA6L6A8MZA4 724 aa16.24■□□□□ 0.19
COL1A1-205ENST00000476387 HTRA2O43464 458 aaPredicted RBP16.24■□□□□ 0.19
COL1A1-205ENST00000476387 CSO75390 466 aaKnown RBP16.24■□□□□ 0.19
COL1A1-205ENST00000476387 GCATO75600 419 aa16.24■□□□□ 0.19
COL1A1-205ENST00000476387 DXOO77932 396 aaKnown RBP16.24■□□□□ 0.19
COL1A1-205ENST00000476387 ANXA6P08133 673 aa16.24■□□□□ 0.19
COL1A1-205ENST00000476387 CCNB1P14635 433 aa16.24■□□□□ 0.19
COL1A1-205ENST00000476387 FECHP22830 423 aa16.24■□□□□ 0.19
COL1A1-205ENST00000476387 SOWAHCQ53LP3 525 aaPredicted RBP16.24■□□□□ 0.19
COL1A1-205ENST00000476387 C6orf132Q5T0Z8 1188 aa16.24■□□□□ 0.19
COL1A1-205ENST00000476387 ARMC12Q5T9G4 340 aa16.24■□□□□ 0.19
COL1A1-205ENST00000476387 FAXCQ5TGI0 409 aa16.24■□□□□ 0.19
COL1A1-205ENST00000476387 GUSBP11Q6P575 273 aa16.24■□□□□ 0.19
COL1A1-205ENST00000476387 DPPA4Q7L190 304 aa16.24■□□□□ 0.19
COL1A1-205ENST00000476387 EFL1Q7Z2Z2 1120 aaKnown RBP16.24■□□□□ 0.19
COL1A1-205ENST00000476387 CCDC13Q8IYE1 715 aa16.24■□□□□ 0.19
COL1A1-205ENST00000476387 LSMEM2Q8N112 164 aa16.24■□□□□ 0.19
COL1A1-205ENST00000476387 SDR16C5Q8N3Y7 309 aa16.24■□□□□ 0.19
COL1A1-205ENST00000476387 PLD5Q8N7P1 536 aa16.24■□□□□ 0.19
COL1A1-205ENST00000476387 ATL2Q8NHH9 583 aa16.24■□□□□ 0.19
COL1A1-205ENST00000476387 SPOCK2Q92563 424 aa16.24■□□□□ 0.19
COL1A1-205ENST00000476387 MAML1Q92585 1016 aa16.24■□□□□ 0.19
COL1A1-205ENST00000476387 NAT6Q93015 286 aa16.24■□□□□ 0.19
COL1A1-205ENST00000476387 RNF25Q96BH1 459 aaPredicted RBP16.24■□□□□ 0.19
COL1A1-205ENST00000476387 ZNF578Q96N58 590 aaPredicted RBP16.24■□□□□ 0.19
COL1A1-205ENST00000476387 SEMA3CQ99985 751 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms