RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 SERPINA4P29622 427 aa7.04□□□□□ -1.28
HDAC3-207ENST00000475549 ETV3P41162 512 aa7.04□□□□□ -1.28
HDAC3-207ENST00000475549 RPIAP49247 311 aa7.04□□□□□ -1.28
HDAC3-207ENST00000475549 BLKP51451 505 aa7.04□□□□□ -1.28
HDAC3-207ENST00000475549 ARSEP51690 589 aa7.04□□□□□ -1.28
HDAC3-207ENST00000475549 KIAA1024LP59773 190 aa7.04□□□□□ -1.28
HDAC3-207ENST00000475549 MAXP61244 160 aa7.04□□□□□ -1.28
HDAC3-207ENST00000475549 SLC25A11Q02978 314 aaKnown RBP7.04□□□□□ -1.28
HDAC3-207ENST00000475549 ZFP36L1Q07352 338 aaKnown RBP7.04□□□□□ -1.28
HDAC3-207ENST00000475549 BCL2L1Q07817 233 aa7.04□□□□□ -1.28
HDAC3-207ENST00000475549 TRAF2Q12933 501 aa7.04□□□□□ -1.28
HDAC3-207ENST00000475549 MMRN1Q13201 1228 aa7.04□□□□□ -1.28
HDAC3-207ENST00000475549 MTM1Q13496 603 aa7.04□□□□□ -1.28
HDAC3-207ENST00000475549 RFTN1Q14699 578 aaPredicted RBP7.04□□□□□ -1.28
HDAC3-207ENST00000475549 ATP13A4Q4VNC1 1196 aa7.04□□□□□ -1.28
HDAC3-207ENST00000475549 BOLA3Q53S33 107 aa7.04□□□□□ -1.28
HDAC3-207ENST00000475549 FAM182AQ5T1J6 154 aa7.04□□□□□ -1.28
HDAC3-207ENST00000475549 ARHGAP40Q5TG30 622 aa7.04□□□□□ -1.28
HDAC3-207ENST00000475549 ESRP1Q6NXG1 681 aaKnown RBP7.04□□□□□ -1.28
HDAC3-207ENST00000475549 PPP1R2P3Q6NXS1 205 aa7.04□□□□□ -1.28
HDAC3-207ENST00000475549 HSD11B1LQ7Z5J1 315 aa7.04□□□□□ -1.28
HDAC3-207ENST00000475549 CLEC14AQ86T13 490 aa7.04□□□□□ -1.28
HDAC3-207ENST00000475549 ZNF843Q8N446 348 aa7.04□□□□□ -1.28
HDAC3-207ENST00000475549 FAM46DQ8NEK8 389 aa7.04□□□□□ -1.28
HDAC3-207ENST00000475549 OR56A4Q8NGH8 313 aa7.04□□□□□ -1.28
HDAC3-207ENST00000475549 LRRN4Q8WUT4 740 aa7.04□□□□□ -1.28
HDAC3-207ENST00000475549 PIH1D2Q8WWB5 315 aa7.04□□□□□ -1.28
HDAC3-207ENST00000475549 KCNE4Q8WWG9 221 aa7.04□□□□□ -1.28
HDAC3-207ENST00000475549 HSPH1Q92598 858 aa7.04□□□□□ -1.28
HDAC3-207ENST00000475549 NAT6Q93015 286 aa7.04□□□□□ -1.28
HDAC3-207ENST00000475549 ZNF653Q96CK0 615 aa7.04□□□□□ -1.28
HDAC3-207ENST00000475549 WDR92Q96MX6 357 aa7.04□□□□□ -1.28
HDAC3-207ENST00000475549 ZNF599Q96NL3 588 aa7.04□□□□□ -1.28
HDAC3-207ENST00000475549 LGMNQ99538 433 aa7.04□□□□□ -1.28
HDAC3-207ENST00000475549 MGME1Q9BQP7 344 aa7.04□□□□□ -1.28
HDAC3-207ENST00000475549 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.04□□□□□ -1.28
HDAC3-207ENST00000475549 CINPQ9BW66 212 aaPredicted RBP7.04□□□□□ -1.28
HDAC3-207ENST00000475549 SEMA4CQ9C0C4 833 aa7.04□□□□□ -1.28
HDAC3-207ENST00000475549 NAT10Q9H0A0 1025 aaKnown RBP7.04□□□□□ -1.28
HDAC3-207ENST00000475549 THAP2Q9H0W7 228 aa7.04□□□□□ -1.28
HDAC3-207ENST00000475549 LRRN3Q9H3W5 708 aa7.04□□□□□ -1.28
HDAC3-207ENST00000475549 ATP13A3Q9H7F0 1226 aa7.04□□□□□ -1.28
HDAC3-207ENST00000475549 ZWILCHQ9H900 591 aa7.04□□□□□ -1.28
HDAC3-207ENST00000475549 PCDH18Q9HCL0 1135 aa7.04□□□□□ -1.28
HDAC3-207ENST00000475549 THSD1Q9NS62 852 aa7.04□□□□□ -1.28
HDAC3-207ENST00000475549 SPATS2LQ9NUQ6 558 aaKnown RBP7.04□□□□□ -1.28
HDAC3-207ENST00000475549 DONSONQ9NYP3 566 aa7.04□□□□□ -1.28
HDAC3-207ENST00000475549 KLQ9UEF7 1012 aa7.04□□□□□ -1.28
HDAC3-207ENST00000475549 ATXN7L1Q9ULK2 861 aaPredicted RBP7.04□□□□□ -1.28
HDAC3-207ENST00000475549 GPR34Q9UPC5 381 aa7.04□□□□□ -1.28
HDAC3-207ENST00000475549 RNF215Q9Y6U7 377 aa7.04□□□□□ -1.28
HDAC3-207ENST00000475549 CHD5Q8TDI0 1954 aa7.03□□□□□ -1.28
HDAC3-207ENST00000475549 NPIPB15A6NHN6 443 aaPredicted RBP7.03□□□□□ -1.28
HDAC3-207ENST00000475549 SMTNL1A8MU46 457 aa7.03□□□□□ -1.28
HDAC3-207ENST00000475549 D6RAR5 112 aa7.03□□□□□ -1.28
HDAC3-207ENST00000475549 GOLGA6L22H0YM25 854 aa7.03□□□□□ -1.28
HDAC3-207ENST00000475549 AGRPO00253 132 aa7.03□□□□□ -1.28
HDAC3-207ENST00000475549 TNFRSF10CO14798 259 aa7.03□□□□□ -1.28
HDAC3-207ENST00000475549 B4GAT1O43505 415 aa7.03□□□□□ -1.28
HDAC3-207ENST00000475549 FZD6O60353 706 aa7.03□□□□□ -1.28
HDAC3-207ENST00000475549 HEXIM1O94992 359 aaKnown RBP7.03□□□□□ -1.28
HDAC3-207ENST00000475549 ZIC2O95409 532 aaPredicted RBP7.03□□□□□ -1.28
HDAC3-207ENST00000475549 SOD1P00441 154 aa7.03□□□□□ -1.28
HDAC3-207ENST00000475549 CYP1A2P05177 515 aa7.03□□□□□ -1.28
HDAC3-207ENST00000475549 FGF1P05230 155 aa7.03□□□□□ -1.28
HDAC3-207ENST00000475549 ALPIP09923 528 aa7.03□□□□□ -1.28
HDAC3-207ENST00000475549 ELFN1P0C7U0 828 aa7.03□□□□□ -1.28
HDAC3-207ENST00000475549 MYBL1P10243 752 aa7.03□□□□□ -1.28
HDAC3-207ENST00000475549 KRT10P13645 584 aa7.03□□□□□ -1.28
HDAC3-207ENST00000475549 HTR1BP28222 390 aa7.03□□□□□ -1.28
HDAC3-207ENST00000475549 RBMS1P29558 406 aaKnown RBP7.03□□□□□ -1.28
HDAC3-207ENST00000475549 POLD2P49005 469 aa7.03□□□□□ -1.28
HDAC3-207ENST00000475549 RENBPP51606 427 aa7.03□□□□□ -1.28
HDAC3-207ENST00000475549 AP1S1P61966 158 aa7.03□□□□□ -1.28
HDAC3-207ENST00000475549 POLR2LP62875 67 aaKnown RBP7.03□□□□□ -1.28
HDAC3-207ENST00000475549 B4GALNT1Q00973 533 aa7.03□□□□□ -1.28
HDAC3-207ENST00000475549 PTSQ03393 145 aa7.03□□□□□ -1.28
HDAC3-207ENST00000475549 SRSF6Q13247 344 aaKnown RBP7.03□□□□□ -1.28
HDAC3-207ENST00000475549 CLN3Q13286 438 aa7.03□□□□□ -1.28
HDAC3-207ENST00000475549 SPIDRQ14159 915 aa7.03□□□□□ -1.28
HDAC3-207ENST00000475549 HLTFQ14527 1009 aaKnown RBP eCLIP7.03□□□□□ -1.28
HDAC3-207ENST00000475549 ACOX1Q15067 660 aa7.03□□□□□ -1.28
HDAC3-207ENST00000475549 TGIF1Q15583 401 aa7.03□□□□□ -1.28
HDAC3-207ENST00000475549 CNGA3Q16281 694 aa7.03□□□□□ -1.28
HDAC3-207ENST00000475549 FIGNQ5HY92 759 aa7.03□□□□□ -1.28
HDAC3-207ENST00000475549 CERCAMQ5T4B2 595 aa7.03□□□□□ -1.28
HDAC3-207ENST00000475549 CFAP58Q5T655 872 aa7.03□□□□□ -1.28
HDAC3-207ENST00000475549 TMCO4Q5TGY1 634 aa7.03□□□□□ -1.28
HDAC3-207ENST00000475549 CAVIN1Q6NZI2 390 aaKnown RBP7.03□□□□□ -1.28
HDAC3-207ENST00000475549 FOXR1Q6PIV2 292 aa7.03□□□□□ -1.28
HDAC3-207ENST00000475549 ZNF574Q6ZN55 896 aaPredicted RBP7.03□□□□□ -1.28
HDAC3-207ENST00000475549 Q6ZVL8 140 aa7.03□□□□□ -1.28
HDAC3-207ENST00000475549 TECPR1Q7Z6L1 1165 aa7.03□□□□□ -1.28
HDAC3-207ENST00000475549 TAF8Q7Z7C8 310 aa7.03□□□□□ -1.28
HDAC3-207ENST00000475549 TSPAN33Q86UF1 283 aa7.03□□□□□ -1.28
HDAC3-207ENST00000475549 LUZP1Q86V48 1076 aa7.03□□□□□ -1.28
HDAC3-207ENST00000475549 C17orf82Q86X59 251 aaPredicted RBP7.03□□□□□ -1.28
HDAC3-207ENST00000475549 GKN2Q86XP6 184 aa7.03□□□□□ -1.28
HDAC3-207ENST00000475549 SDR16C5Q8N3Y7 309 aa7.03□□□□□ -1.28
HDAC3-207ENST00000475549 LZTR1Q8N653 840 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms