RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 F9P00740 461 aa6.43□□□□□ -1.38
SMC5-203ENST00000475540 ABCD3P28288 659 aa6.43□□□□□ -1.38
SMC5-203ENST00000475540 RAD23BP54727 409 aa6.43□□□□□ -1.38
SMC5-203ENST00000475540 OASLQ15646 514 aaKnown RBP6.43□□□□□ -1.38
SMC5-203ENST00000475540 GSTA3Q16772 222 aa6.43□□□□□ -1.38
SMC5-203ENST00000475540 ATP13A5Q4VNC0 1218 aa6.43□□□□□ -1.38
SMC5-203ENST00000475540 FAM122CQ6P4D5 195 aa6.43□□□□□ -1.38
SMC5-203ENST00000475540 LCTLQ6UWM7 567 aa6.43□□□□□ -1.38
SMC5-203ENST00000475540 SLC46A3Q7Z3Q1 461 aa6.43□□□□□ -1.38
SMC5-203ENST00000475540 EXOC3L1Q86VI1 746 aa6.43□□□□□ -1.38
SMC5-203ENST00000475540 HEATR4Q86WZ0 1026 aa6.43□□□□□ -1.38
SMC5-203ENST00000475540 ARMC8Q8IUR7 673 aa6.43□□□□□ -1.38
SMC5-203ENST00000475540 SLC35F3Q8IY50 421 aa6.43□□□□□ -1.38
SMC5-203ENST00000475540 TSPYL6Q8N831 410 aa6.43□□□□□ -1.38
SMC5-203ENST00000475540 HUS1BQ8NHY5 278 aa6.43□□□□□ -1.38
SMC5-203ENST00000475540 NFKBIDQ8NI38 313 aa6.43□□□□□ -1.38
SMC5-203ENST00000475540 SLITRK1Q96PX8 696 aa6.43□□□□□ -1.38
SMC5-203ENST00000475540 C17orf75Q9HAS0 396 aa6.43□□□□□ -1.38
SMC5-203ENST00000475540 NOX4Q9NPH5 578 aa6.43□□□□□ -1.38
SMC5-203ENST00000475540 GPR108Q9NPR9 543 aa6.43□□□□□ -1.38
SMC5-203ENST00000475540 CNGB3Q9NQW8 809 aa6.43□□□□□ -1.38
SMC5-203ENST00000475540 ICAM5Q9UMF0 924 aa6.43□□□□□ -1.38
SMC5-203ENST00000475540 STON1Q9Y6Q2 735 aa6.43□□□□□ -1.38
SMC5-203ENST00000475540 SCINQ9Y6U3 715 aa6.43□□□□□ -1.38
SMC5-203ENST00000475540 USP17L23D6RBM5 183 aa6.42□□□□□ -1.38
SMC5-203ENST00000475540 SOCS6O14544 535 aa6.42□□□□□ -1.38
SMC5-203ENST00000475540 KDM4BO94953 1096 aa6.42□□□□□ -1.38
SMC5-203ENST00000475540 AFPP02771 609 aaKnown RBP6.42□□□□□ -1.38
SMC5-203ENST00000475540 CPOXP36551 454 aa6.42□□□□□ -1.38
SMC5-203ENST00000475540 CTCFP49711 727 aaPredicted RBP6.42□□□□□ -1.38
SMC5-203ENST00000475540 SORDQ00796 357 aa6.42□□□□□ -1.38
SMC5-203ENST00000475540 ZNF155Q12901 538 aaPredicted RBP6.42□□□□□ -1.38
SMC5-203ENST00000475540 SETMARQ53H47 684 aaPredicted RBP6.42□□□□□ -1.38
SMC5-203ENST00000475540 WBP2NLQ6ICG8 309 aa6.42□□□□□ -1.38
SMC5-203ENST00000475540 ANKRD54Q6NXT1 300 aa6.42□□□□□ -1.38
SMC5-203ENST00000475540 KRBA2Q6ZNG9 492 aa6.42□□□□□ -1.38
SMC5-203ENST00000475540 TAOK1Q7L7X3 1001 aa6.42□□□□□ -1.38
SMC5-203ENST00000475540 TANKQ92844 425 aa6.42□□□□□ -1.38
SMC5-203ENST00000475540 IL17FQ96PD4 163 aa6.42□□□□□ -1.38
SMC5-203ENST00000475540 GLIS2Q9BZE0 524 aaPredicted RBP6.42□□□□□ -1.38
SMC5-203ENST00000475540 NDST4Q9H3R1 872 aa6.42□□□□□ -1.38
SMC5-203ENST00000475540 C9orf78Q9NZ63 289 aaPredicted RBP6.42□□□□□ -1.38
SMC5-203ENST00000475540 SIX4Q9UIU6 781 aa6.42□□□□□ -1.38
SMC5-203ENST00000475540 PLRG1O43660 514 aaKnown RBP6.41□□□□□ -1.38
SMC5-203ENST00000475540 G6PDP11413 515 aa6.41□□□□□ -1.38
SMC5-203ENST00000475540 DDX5P17844 614 aaKnown RBP6.41□□□□□ -1.38
SMC5-203ENST00000475540 TNFAIP1Q13829 316 aa6.41□□□□□ -1.38
SMC5-203ENST00000475540 C2orf68Q2NKX9 166 aa6.41□□□□□ -1.38
SMC5-203ENST00000475540 METTL2BQ6P1Q9 378 aaKnown RBP6.41□□□□□ -1.38
SMC5-203ENST00000475540 WDR73Q6P4I2 378 aa6.41□□□□□ -1.38
SMC5-203ENST00000475540 UNQ6126/PRO20091Q6UXV3 157 aa6.41□□□□□ -1.38
SMC5-203ENST00000475540 CADM4Q8NFZ8 388 aa6.41□□□□□ -1.38
SMC5-203ENST00000475540 MAGEC3Q8TD91 643 aa6.41□□□□□ -1.38
SMC5-203ENST00000475540 RRP36Q96EU6 259 aaKnown RBP6.41□□□□□ -1.38
SMC5-203ENST00000475540 METTL2AQ96IZ6 378 aaKnown RBP6.41□□□□□ -1.38
SMC5-203ENST00000475540 SLC25A18Q9H1K4 315 aa6.41□□□□□ -1.38
SMC5-203ENST00000475540 ESRP2Q9H6T0 727 aaKnown RBP6.41□□□□□ -1.38
SMC5-203ENST00000475540 PRKRIP1Q9H875 184 aaPredicted RBP6.41□□□□□ -1.38
SMC5-203ENST00000475540 ZNF224Q9NZL3 707 aa6.41□□□□□ -1.38
SMC5-203ENST00000475540 ERVK-11Q9UQG0 969 aa6.41□□□□□ -1.38
SMC5-203ENST00000475540 A0A1W2PQM1 296 aa6.4□□□□□ -1.38
SMC5-203ENST00000475540 A6NLC8 198 aa6.4□□□□□ -1.38
SMC5-203ENST00000475540 HNRNPCL2B2RXH8 293 aa6.4□□□□□ -1.38
SMC5-203ENST00000475540 HOXB5P09067 269 aa6.4□□□□□ -1.38
SMC5-203ENST00000475540 EIF2S3P41091 472 aaKnown RBP6.4□□□□□ -1.38
SMC5-203ENST00000475540 METAP2P50579 478 aaKnown RBP eCLIP6.4□□□□□ -1.38
SMC5-203ENST00000475540 EIF3BP55884 814 aaKnown RBP6.4□□□□□ -1.38
SMC5-203ENST00000475540 POU5F1BQ06416 359 aa6.4□□□□□ -1.38
SMC5-203ENST00000475540 CTF1Q16619 201 aa6.4□□□□□ -1.38
SMC5-203ENST00000475540 ZNF718Q3SXZ3 478 aa6.4□□□□□ -1.38
SMC5-203ENST00000475540 ZNF672Q499Z4 452 aaPredicted RBP6.4□□□□□ -1.38
SMC5-203ENST00000475540 SLC45A4Q5BKX6 768 aa6.4□□□□□ -1.38
SMC5-203ENST00000475540 PAPPA-AS1Q5QFB9 102 aa6.4□□□□□ -1.38
SMC5-203ENST00000475540 ACAD10Q6JQN1 1059 aa6.4□□□□□ -1.38
SMC5-203ENST00000475540 WFIKKN2Q8TEU8 576 aa6.4□□□□□ -1.38
SMC5-203ENST00000475540 RND1Q92730 232 aa6.4□□□□□ -1.38
SMC5-203ENST00000475540 PABPC5Q96DU9 382 aaKnown RBP6.4□□□□□ -1.38
SMC5-203ENST00000475540 SH3GL2Q99962 352 aa6.4□□□□□ -1.38
SMC5-203ENST00000475540 HAUS8Q9BT25 410 aa6.4□□□□□ -1.38
SMC5-203ENST00000475540 TTC7AQ9ULT0 858 aaPredicted RBP6.4□□□□□ -1.38
SMC5-203ENST00000475540 CAMK2AQ9UQM7 478 aa6.4□□□□□ -1.38
SMC5-203ENST00000475540 VDAC3Q9Y277 283 aa6.4□□□□□ -1.38
SMC5-203ENST00000475540 TNFSF14O43557 240 aa6.39□□□□□ -1.39
SMC5-203ENST00000475540 BUB3O43684 328 aa6.39□□□□□ -1.39
SMC5-203ENST00000475540 RFPL2O75678 378 aa6.39□□□□□ -1.39
SMC5-203ENST00000475540 KRT36O76013 467 aa6.39□□□□□ -1.39
SMC5-203ENST00000475540 SEC31AO94979 1220 aaKnown RBP6.39□□□□□ -1.39
SMC5-203ENST00000475540 CYC1P08574 325 aa6.39□□□□□ -1.39
SMC5-203ENST00000475540 NAE1Q13564 534 aa6.39□□□□□ -1.39
SMC5-203ENST00000475540 KRT24Q2M2I5 525 aa6.39□□□□□ -1.39
SMC5-203ENST00000475540 INO80CQ6PI98 192 aaPredicted RBP6.39□□□□□ -1.39
SMC5-203ENST00000475540 SLC36A4Q6YBV0 504 aa6.39□□□□□ -1.39
SMC5-203ENST00000475540 CCNI2Q6ZMN8 369 aaPredicted RBP6.39□□□□□ -1.39
SMC5-203ENST00000475540 GSTA5Q7RTV2 222 aa6.39□□□□□ -1.39
SMC5-203ENST00000475540 SPATA6LQ8N4H0 392 aa6.39□□□□□ -1.39
SMC5-203ENST00000475540 NEK9Q8TD19 979 aa6.39□□□□□ -1.39
SMC5-203ENST00000475540 ZUFSPQ96AP4 578 aa6.39□□□□□ -1.39
SMC5-203ENST00000475540 FAM110AQ9BQ89 295 aa6.39□□□□□ -1.39
SMC5-203ENST00000475540 EIF2AK1Q9BQI3 630 aaKnown RBP6.39□□□□□ -1.39
SMC5-203ENST00000475540 TKTL2Q9H0I9 626 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms