RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 NPIPB15A6NHN6 443 aaPredicted RBP17.98■□□□□ 0.47
UPF3A-203ENST00000474056 FZD6O60353 706 aa17.98■□□□□ 0.47
UPF3A-203ENST00000474056 CELA2BP08218 269 aaPredicted RBP17.98■□□□□ 0.47
UPF3A-203ENST00000474056 CYP2A6P11509 494 aaPredicted RBP17.98■□□□□ 0.47
UPF3A-203ENST00000474056 CCNB1P14635 433 aa17.98■□□□□ 0.47
UPF3A-203ENST00000474056 CTPS1P17812 591 aa17.98■□□□□ 0.47
UPF3A-203ENST00000474056 SLC1A1P43005 524 aa17.98■□□□□ 0.47
UPF3A-203ENST00000474056 ACOX1Q15067 660 aa17.98■□□□□ 0.47
UPF3A-203ENST00000474056 ALG11Q2TAA5 492 aa17.98■□□□□ 0.47
UPF3A-203ENST00000474056 FAM182AQ5T1J6 154 aa17.98■□□□□ 0.47
UPF3A-203ENST00000474056 LRRC38Q5VT99 294 aa17.98■□□□□ 0.47
UPF3A-203ENST00000474056 DENND2CQ68D51 928 aa17.98■□□□□ 0.47
UPF3A-203ENST00000474056 KCTD16Q68DU8 428 aa17.98■□□□□ 0.47
UPF3A-203ENST00000474056 VSIG1Q86XK7 387 aa17.98■□□□□ 0.47
UPF3A-203ENST00000474056 RHOT1Q8IXI2 618 aa17.98■□□□□ 0.47
UPF3A-203ENST00000474056 CCNYQ8ND76 341 aa17.98■□□□□ 0.47
UPF3A-203ENST00000474056 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.98■□□□□ 0.47
UPF3A-203ENST00000474056 RNF25Q96BH1 459 aaPredicted RBP17.98■□□□□ 0.47
UPF3A-203ENST00000474056 COQ10AQ96MF6 247 aa17.98■□□□□ 0.47
UPF3A-203ENST00000474056 SMIM14Q96QK8 99 aa17.98■□□□□ 0.47
UPF3A-203ENST00000474056 LGMNQ99538 433 aa17.98■□□□□ 0.47
UPF3A-203ENST00000474056 SLC13A1Q9BZW2 595 aa17.98■□□□□ 0.47
UPF3A-203ENST00000474056 CLPBQ9H078 707 aa17.98■□□□□ 0.47
UPF3A-203ENST00000474056 GOLPH3Q9H4A6 298 aa17.98■□□□□ 0.47
UPF3A-203ENST00000474056 A0A0U1RQS6 177 aa17.97■□□□□ 0.47
UPF3A-203ENST00000474056 TAF4O00268 1085 aa17.97■□□□□ 0.47
UPF3A-203ENST00000474056 APOL1O14791 398 aa17.97■□□□□ 0.47
UPF3A-203ENST00000474056 SPOPO43791 374 aa17.97■□□□□ 0.47
UPF3A-203ENST00000474056 HEXIM1O94992 359 aaKnown RBP17.97■□□□□ 0.47
UPF3A-203ENST00000474056 ALPIP09923 528 aa17.97■□□□□ 0.47
UPF3A-203ENST00000474056 JUPP14923 745 aa17.97■□□□□ 0.47
UPF3A-203ENST00000474056 TSHRP16473 764 aa17.97■□□□□ 0.47
UPF3A-203ENST00000474056 HTR1BP28222 390 aa17.97■□□□□ 0.47
UPF3A-203ENST00000474056 NOP2P46087 812 aaKnown RBP17.97■□□□□ 0.47
UPF3A-203ENST00000474056 HK3P52790 923 aa17.97■□□□□ 0.47
UPF3A-203ENST00000474056 INSM1Q01101 510 aaPredicted RBP17.97■□□□□ 0.47
UPF3A-203ENST00000474056 PPIDQ08752 370 aaKnown RBP17.97■□□□□ 0.47
UPF3A-203ENST00000474056 NIPAL4Q0D2K0 466 aa17.97■□□□□ 0.47
UPF3A-203ENST00000474056 ESRP1Q6NXG1 681 aaKnown RBP17.97■□□□□ 0.47
UPF3A-203ENST00000474056 ZCCHC8Q6NZY4 707 aaKnown RBP17.97■□□□□ 0.47
UPF3A-203ENST00000474056 MFSD7Q6UXD7 560 aa17.97■□□□□ 0.47
UPF3A-203ENST00000474056 NPNTQ6UXI9 565 aa17.97■□□□□ 0.47
UPF3A-203ENST00000474056 TSPAN33Q86UF1 283 aa17.97■□□□□ 0.47
UPF3A-203ENST00000474056 RFX6Q8HWS3 928 aa17.97■□□□□ 0.47
UPF3A-203ENST00000474056 HID1Q8IV36 788 aa17.97■□□□□ 0.47
UPF3A-203ENST00000474056 CCDC170Q8IYT3 715 aa17.97■□□□□ 0.47
UPF3A-203ENST00000474056 ARRDC2Q8TBH0 407 aa17.97■□□□□ 0.47
UPF3A-203ENST00000474056 FUBP1Q96AE4 644 aaKnown RBP17.97■□□□□ 0.47
UPF3A-203ENST00000474056 NUS1Q96E22 293 aa17.97■□□□□ 0.47
UPF3A-203ENST00000474056 SCRN2Q96FV2 425 aa17.97■□□□□ 0.47
UPF3A-203ENST00000474056 PDXPQ96GD0 296 aa17.97■□□□□ 0.47
UPF3A-203ENST00000474056 TBATAQ96M53 351 aa17.97■□□□□ 0.47
UPF3A-203ENST00000474056 WDR92Q96MX6 357 aa17.97■□□□□ 0.47
UPF3A-203ENST00000474056 ZNF830Q96NB3 372 aaPredicted RBP17.97■□□□□ 0.47
UPF3A-203ENST00000474056 MCCC1Q96RQ3 725 aaPredicted RBP17.97■□□□□ 0.47
UPF3A-203ENST00000474056 IL12RB2Q99665 862 aa17.97■□□□□ 0.47
UPF3A-203ENST00000474056 DDX56Q9NY93 547 aaKnown RBP17.97■□□□□ 0.47
UPF3A-203ENST00000474056 KLQ9UEF7 1012 aa17.97■□□□□ 0.47
UPF3A-203ENST00000474056 AMACRQ9UHK6 382 aa17.97■□□□□ 0.47
UPF3A-203ENST00000474056 PPIL1Q9Y3C6 166 aa17.97■□□□□ 0.47
UPF3A-203ENST00000474056 PCDHA13Q9Y5I0 950 aa17.97■□□□□ 0.47
UPF3A-203ENST00000474056 HEY1Q9Y5J3 304 aa17.97■□□□□ 0.47
UPF3A-203ENST00000474056 FREM2Q5SZK8 3169 aa17.97■□□□□ 0.47
UPF3A-203ENST00000474056 KIF26BQ2KJY2 2108 aa17.96■□□□□ 0.47
UPF3A-203ENST00000474056 SOWAHDA6NJG2 315 aa17.96■□□□□ 0.47
UPF3A-203ENST00000474056 KCNK1O00180 336 aa17.96■□□□□ 0.47
UPF3A-203ENST00000474056 NFKBIAP25963 317 aa17.96■□□□□ 0.47
UPF3A-203ENST00000474056 CYLC1P35663 651 aaPredicted RBP17.96■□□□□ 0.47
UPF3A-203ENST00000474056 HNF1BP35680 557 aa17.96■□□□□ 0.47
UPF3A-203ENST00000474056 BLKP51451 505 aa17.96■□□□□ 0.47
UPF3A-203ENST00000474056 HADHBP55084 474 aaKnown RBP17.96■□□□□ 0.47
UPF3A-203ENST00000474056 KIAA1024LP59773 190 aa17.96■□□□□ 0.47
UPF3A-203ENST00000474056 SRP54P61011 504 aaKnown RBP17.96■□□□□ 0.47
UPF3A-203ENST00000474056 ZBTB17Q13105 803 aa17.96■□□□□ 0.47
UPF3A-203ENST00000474056 TCEA2Q15560 299 aa17.96■□□□□ 0.47
UPF3A-203ENST00000474056 USP45Q70EL2 814 aa17.96■□□□□ 0.47
UPF3A-203ENST00000474056 RD3Q7Z3Z2 195 aa17.96■□□□□ 0.47
UPF3A-203ENST00000474056 HSD11B1LQ7Z5J1 315 aa17.96■□□□□ 0.47
UPF3A-203ENST00000474056 PROSER1Q86XN7 944 aa17.96■□□□□ 0.47
UPF3A-203ENST00000474056 CBARPQ8N350 705 aaPredicted RBP17.96■□□□□ 0.47
UPF3A-203ENST00000474056 TPCN2Q8NHX9 752 aa17.96■□□□□ 0.47
UPF3A-203ENST00000474056 TDRD1Q9BXT4 1180 aaKnown RBP17.96■□□□□ 0.47
UPF3A-203ENST00000474056 MAK16Q9BXY0 300 aaKnown RBP17.96■□□□□ 0.47
UPF3A-203ENST00000474056 CCDC86Q9H6F5 360 aaKnown RBP17.96■□□□□ 0.47
UPF3A-203ENST00000474056 SALL4Q9UJQ4 1053 aa17.96■□□□□ 0.47
UPF3A-203ENST00000474056 CHKBQ9Y259 395 aa17.96■□□□□ 0.47
UPF3A-203ENST00000474056 ALG6Q9Y672 507 aa17.96■□□□□ 0.47
UPF3A-203ENST00000474056 URB1O60287 2271 aaKnown RBP17.95■□□□□ 0.46
UPF3A-203ENST00000474056 TRABD2BA6NFA1 517 aa17.95■□□□□ 0.46
UPF3A-203ENST00000474056 TMEM202A6NGA9 273 aa17.95■□□□□ 0.46
UPF3A-203ENST00000474056 SRRM3A6NNA2 597 aaPredicted RBP17.95■□□□□ 0.46
UPF3A-203ENST00000474056 LMO7DNF2Z398 122 aa17.95■□□□□ 0.46
UPF3A-203ENST00000474056 CACNB4O00305 520 aaPredicted RBP17.95■□□□□ 0.46
UPF3A-203ENST00000474056 TPP1O14773 563 aa17.95■□□□□ 0.46
UPF3A-203ENST00000474056 RASGRP1O95267 797 aa17.95■□□□□ 0.46
UPF3A-203ENST00000474056 JCHAINP01591 159 aa17.95■□□□□ 0.46
UPF3A-203ENST00000474056 ANXA6P08133 673 aa17.95■□□□□ 0.46
UPF3A-203ENST00000474056 TRIM23P36406 574 aa17.95■□□□□ 0.46
UPF3A-203ENST00000474056 ETV3P41162 512 aa17.95■□□□□ 0.46
UPF3A-203ENST00000474056 DUSP3P51452 185 aaPredicted RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms