RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 PIH1D2Q8WWB5 315 aa14.26□□□□□ -0.13
VAMP4-203ENST00000474047 ADGRE3Q9BY15 652 aa14.26□□□□□ -0.13
VAMP4-203ENST00000474047 OSBPL8Q9BZF1 889 aa14.26□□□□□ -0.13
VAMP4-203ENST00000474047 GRPEL1Q9HAV7 217 aa14.26□□□□□ -0.13
VAMP4-203ENST00000474047 PCDH9Q9HC56 1237 aa14.26□□□□□ -0.13
VAMP4-203ENST00000474047 KCTD5Q9NXV2 234 aa14.26□□□□□ -0.13
VAMP4-203ENST00000474047 GOLGA6AQ9NYA3 693 aa14.26□□□□□ -0.13
VAMP4-203ENST00000474047 GUCA1BQ9UMX6 200 aa14.26□□□□□ -0.13
VAMP4-203ENST00000474047 ADGRG1Q9Y653 693 aa14.26□□□□□ -0.13
VAMP4-203ENST00000474047 MIF4GDA9UHW6 222 aaKnown RBP14.25□□□□□ -0.13
VAMP4-203ENST00000474047 FFAR2O15552 330 aa14.25□□□□□ -0.13
VAMP4-203ENST00000474047 HEXIM1O94992 359 aaKnown RBP14.25□□□□□ -0.13
VAMP4-203ENST00000474047 TRIM16O95361 564 aa14.25□□□□□ -0.13
VAMP4-203ENST00000474047 FTCDO95954 541 aa14.25□□□□□ -0.13
VAMP4-203ENST00000474047 ALPIP09923 528 aa14.25□□□□□ -0.13
VAMP4-203ENST00000474047 FTH1P19P0C7X4 201 aa14.25□□□□□ -0.13
VAMP4-203ENST00000474047 ALPPL2P10696 532 aa14.25□□□□□ -0.13
VAMP4-203ENST00000474047 JUNDP17535 347 aa14.25□□□□□ -0.13
VAMP4-203ENST00000474047 DGKAP23743 735 aa14.25□□□□□ -0.13
VAMP4-203ENST00000474047 TNNT3P45378 269 aaPredicted RBP14.25□□□□□ -0.13
VAMP4-203ENST00000474047 PEX5P50542 639 aa14.25□□□□□ -0.13
VAMP4-203ENST00000474047 AGERQ15109 404 aa14.25□□□□□ -0.13
VAMP4-203ENST00000474047 CNGA3Q16281 694 aa14.25□□□□□ -0.13
VAMP4-203ENST00000474047 CCDC70Q6NSX1 233 aa14.25□□□□□ -0.13
VAMP4-203ENST00000474047 KDM7AQ6ZMT4 941 aa14.25□□□□□ -0.13
VAMP4-203ENST00000474047 BBS12Q6ZW61 710 aa14.25□□□□□ -0.13
VAMP4-203ENST00000474047 GLRX5Q86SX6 157 aa14.25□□□□□ -0.13
VAMP4-203ENST00000474047 CNTD1Q8N815 330 aa14.25□□□□□ -0.13
VAMP4-203ENST00000474047 BTN2A2Q8WVV5 523 aa14.25□□□□□ -0.13
VAMP4-203ENST00000474047 NUS1Q96E22 293 aa14.25□□□□□ -0.13
VAMP4-203ENST00000474047 CNDP2Q96KP4 475 aaKnown RBP14.25□□□□□ -0.13
VAMP4-203ENST00000474047 RBM15Q96T37 977 aaKnown RBP eCLIP14.25□□□□□ -0.13
VAMP4-203ENST00000474047 APOOQ9BUR5 198 aa14.25□□□□□ -0.13
VAMP4-203ENST00000474047 TDRD1Q9BXT4 1180 aaKnown RBP14.25□□□□□ -0.13
VAMP4-203ENST00000474047 SLC13A1Q9BZW2 595 aa14.25□□□□□ -0.13
VAMP4-203ENST00000474047 ANGPTL2Q9UKU9 493 aa14.25□□□□□ -0.13
VAMP4-203ENST00000474047 DNPEPQ9ULA0 475 aa14.25□□□□□ -0.13
VAMP4-203ENST00000474047 DCHS1Q96JQ0 3298 aa14.25□□□□□ -0.13
VAMP4-203ENST00000474047 LRRK1Q38SD2 2015 aa14.25□□□□□ -0.13
VAMP4-203ENST00000474047 A0A0U1RQJ8 604 aa14.24□□□□□ -0.13
VAMP4-203ENST00000474047 NPIPB15A6NHN6 443 aaPredicted RBP14.24□□□□□ -0.13
VAMP4-203ENST00000474047 HACD1B0YJ81 288 aa14.24□□□□□ -0.13
VAMP4-203ENST00000474047 APOC4-APOC2K7ER74 178 aa14.24□□□□□ -0.13
VAMP4-203ENST00000474047 CACNB4O00305 520 aaPredicted RBP14.24□□□□□ -0.13
VAMP4-203ENST00000474047 TJP3O95049 919 aa14.24□□□□□ -0.13
VAMP4-203ENST00000474047 APOC2P02655 101 aa14.24□□□□□ -0.13
VAMP4-203ENST00000474047 CSF2P04141 144 aa14.24□□□□□ -0.13
VAMP4-203ENST00000474047 HNF1BP35680 557 aa14.24□□□□□ -0.13
VAMP4-203ENST00000474047 RPL26P61254 145 aaKnown RBP14.24□□□□□ -0.13
VAMP4-203ENST00000474047 PPARDQ03181 441 aa14.24□□□□□ -0.13
VAMP4-203ENST00000474047 ADCY2Q08462 1091 aa14.24□□□□□ -0.13
VAMP4-203ENST00000474047 MTM1Q13496 603 aa14.24□□□□□ -0.13
VAMP4-203ENST00000474047 PRKD1Q15139 912 aaPredicted RBP14.24□□□□□ -0.13
VAMP4-203ENST00000474047 TEX44Q53QW1 395 aa14.24□□□□□ -0.13
VAMP4-203ENST00000474047 ENPP7Q6UWV6 458 aa14.24□□□□□ -0.13
VAMP4-203ENST00000474047 KDELC2Q7Z4H8 507 aa14.24□□□□□ -0.13
VAMP4-203ENST00000474047 LRRC8AQ8IWT6 810 aa14.24□□□□□ -0.13
VAMP4-203ENST00000474047 PNPLA1Q8N8W4 532 aa14.24□□□□□ -0.13
VAMP4-203ENST00000474047 SLC25A51Q9H1U9 297 aa14.24□□□□□ -0.13
VAMP4-203ENST00000474047 GLOD4Q9HC38 313 aa14.24□□□□□ -0.13
VAMP4-203ENST00000474047 KLHL8Q9P2G9 620 aaPredicted RBP14.24□□□□□ -0.13
VAMP4-203ENST00000474047 RPL26L1Q9UNX3 145 aaKnown RBP14.24□□□□□ -0.13
VAMP4-203ENST00000474047 EFR3BQ9Y2G0 817 aa14.24□□□□□ -0.13
VAMP4-203ENST00000474047 OR1A2Q9Y585 309 aa14.24□□□□□ -0.13
VAMP4-203ENST00000474047 A0A0J9YYE9 177 aa14.24□□□□□ -0.13
VAMP4-203ENST00000474047 GOLGA6L9A6NEM1 432 aa14.24□□□□□ -0.13
VAMP4-203ENST00000474047 PSMD11O00231 422 aa14.24□□□□□ -0.13
VAMP4-203ENST00000474047 ENC1O14682 589 aa14.24□□□□□ -0.13
VAMP4-203ENST00000474047 FZD6O60353 706 aa14.24□□□□□ -0.13
VAMP4-203ENST00000474047 PIAS2O75928 621 aa14.24□□□□□ -0.13
VAMP4-203ENST00000474047 TRBC1P01850 177 aa14.24□□□□□ -0.13
VAMP4-203ENST00000474047 CCDC175P0C221 793 aa14.24□□□□□ -0.13
VAMP4-203ENST00000474047 ATXN1LP0C7T5 689 aaKnown RBP14.24□□□□□ -0.13
VAMP4-203ENST00000474047 NME1P15531 152 aaKnown RBP14.24□□□□□ -0.13
VAMP4-203ENST00000474047 PTPN3P26045 913 aa14.24□□□□□ -0.13
VAMP4-203ENST00000474047 BLKP51451 505 aa14.24□□□□□ -0.13
VAMP4-203ENST00000474047 SKOR1P84550 965 aa14.24□□□□□ -0.13
VAMP4-203ENST00000474047 XRCC4Q13426 336 aa14.24□□□□□ -0.13
VAMP4-203ENST00000474047 PCSK7Q16549 785 aa14.24□□□□□ -0.13
VAMP4-203ENST00000474047 MACC1Q6ZN28 852 aa14.24□□□□□ -0.13
VAMP4-203ENST00000474047 PID1Q7Z2X4 250 aa14.24□□□□□ -0.13
VAMP4-203ENST00000474047 RD3Q7Z3Z2 195 aa14.24□□□□□ -0.13
VAMP4-203ENST00000474047 HSD11B1LQ7Z5J1 315 aa14.24□□□□□ -0.13
VAMP4-203ENST00000474047 TSPAN33Q86UF1 283 aa14.24□□□□□ -0.13
VAMP4-203ENST00000474047 BAHD1Q8TBE0 780 aaPredicted RBP14.24□□□□□ -0.13
VAMP4-203ENST00000474047 ANP32BQ92688 251 aaKnown RBP14.24□□□□□ -0.13
VAMP4-203ENST00000474047 MCCC1Q96RQ3 725 aaPredicted RBP14.24□□□□□ -0.13
VAMP4-203ENST00000474047 MLPHQ9BV36 600 aaPredicted RBP14.24□□□□□ -0.13
VAMP4-203ENST00000474047 GPR27Q9NS67 375 aa14.24□□□□□ -0.13
VAMP4-203ENST00000474047 UCKL1Q9NWZ5 548 aa14.24□□□□□ -0.13
VAMP4-203ENST00000474047 SPASTQ9UBP0 616 aa14.24□□□□□ -0.13
VAMP4-203ENST00000474047 PACSIN2Q9UNF0 486 aaPredicted RBP14.24□□□□□ -0.13
VAMP4-203ENST00000474047 PPIL1Q9Y3C6 166 aa14.24□□□□□ -0.13
VAMP4-203ENST00000474047 PYGMP11217 842 aa14.23□□□□□ -0.13
VAMP4-203ENST00000474047 CTSEP14091 401 aa14.23□□□□□ -0.13
VAMP4-203ENST00000474047 ZNF30P17039 623 aa14.23□□□□□ -0.13
VAMP4-203ENST00000474047 KELP23276 732 aa14.23□□□□□ -0.13
VAMP4-203ENST00000474047 PMLP29590 882 aa14.23□□□□□ -0.13
VAMP4-203ENST00000474047 ETV3P41162 512 aa14.23□□□□□ -0.13
VAMP4-203ENST00000474047 ZNF211Q13398 564 aaPredicted RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms