RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 TERF1P54274 439 aa4.36□□□□□ -1.71
BRCA1-212ENST00000473961 PNLIPRP2P54317 469 aa4.36□□□□□ -1.71
BRCA1-212ENST00000473961 UBXN2AP68543 259 aa4.36□□□□□ -1.71
BRCA1-212ENST00000473961 MRPS34P82930 218 aaKnown RBP4.36□□□□□ -1.71
BRCA1-212ENST00000473961 SORDQ00796 357 aa4.36□□□□□ -1.71
BRCA1-212ENST00000473961 PCLAFQ15004 111 aa4.36□□□□□ -1.71
BRCA1-212ENST00000473961 TMEM119Q4V9L6 283 aa4.36□□□□□ -1.71
BRCA1-212ENST00000473961 SOWAHCQ53LP3 525 aaPredicted RBP4.36□□□□□ -1.71
BRCA1-212ENST00000473961 C1orf141Q5JVX7 400 aa4.36□□□□□ -1.71
BRCA1-212ENST00000473961 MEX3CQ5U5Q3 659 aaKnown RBP4.36□□□□□ -1.71
BRCA1-212ENST00000473961 KRT79Q5XKE5 535 aa4.36□□□□□ -1.71
BRCA1-212ENST00000473961 KIAA0930Q6ICG6 404 aaPredicted RBP4.36□□□□□ -1.71
BRCA1-212ENST00000473961 OLFML1Q6UWY5 402 aa4.36□□□□□ -1.71
BRCA1-212ENST00000473961 ZNF793Q6ZN11 406 aa4.36□□□□□ -1.71
BRCA1-212ENST00000473961 LINGO2Q7L985 606 aa4.36□□□□□ -1.71
BRCA1-212ENST00000473961 CHST3Q7LGC8 479 aa4.36□□□□□ -1.71
BRCA1-212ENST00000473961 CCDC186Q7Z3E2 898 aa4.36□□□□□ -1.71
BRCA1-212ENST00000473961 PALB2Q86YC2 1186 aa4.36□□□□□ -1.71
BRCA1-212ENST00000473961 ARID3BQ8IVW6 561 aaPredicted RBP4.36□□□□□ -1.71
BRCA1-212ENST00000473961 MCEMP1Q8IX19 187 aa4.36□□□□□ -1.71
BRCA1-212ENST00000473961 HORMAD2Q8N7B1 307 aa4.36□□□□□ -1.71
BRCA1-212ENST00000473961 SLC44A5Q8NCS7 719 aa4.36□□□□□ -1.71
BRCA1-212ENST00000473961 HUS1BQ8NHY5 278 aa4.36□□□□□ -1.71
BRCA1-212ENST00000473961 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.36□□□□□ -1.71
BRCA1-212ENST00000473961 HASPINQ8TF76 798 aa4.36□□□□□ -1.71
BRCA1-212ENST00000473961 ELMOD3Q96FG2 381 aa4.36□□□□□ -1.71
BRCA1-212ENST00000473961 ZNF570Q96NI8 536 aa4.36□□□□□ -1.71
BRCA1-212ENST00000473961 GCNAQ96QF7 691 aa4.36□□□□□ -1.71
BRCA1-212ENST00000473961 OR2A14Q96R47 310 aa4.36□□□□□ -1.71
BRCA1-212ENST00000473961 FIZ1Q96SL8 496 aa4.36□□□□□ -1.71
BRCA1-212ENST00000473961 ADPGKQ9BRR6 497 aa4.36□□□□□ -1.71
BRCA1-212ENST00000473961 WDR83Q9BRX9 315 aaKnown RBP4.36□□□□□ -1.71
BRCA1-212ENST00000473961 SEMA4CQ9C0C4 833 aa4.36□□□□□ -1.71
BRCA1-212ENST00000473961 RSPH9Q9H1X1 276 aaPredicted RBP4.36□□□□□ -1.71
BRCA1-212ENST00000473961 MLXIPLQ9NP71 852 aa4.36□□□□□ -1.71
BRCA1-212ENST00000473961 TMEM45AQ9NWC5 275 aa4.36□□□□□ -1.71
BRCA1-212ENST00000473961 UBA2Q9UBT2 640 aaPredicted RBP4.36□□□□□ -1.71
BRCA1-212ENST00000473961 CNOT8Q9UFF9 292 aaKnown RBP4.36□□□□□ -1.71
BRCA1-212ENST00000473961 PTRH2Q9Y3E5 179 aaKnown RBP4.36□□□□□ -1.71
BRCA1-212ENST00000473961 CMAHPQ9Y471 501 aa4.36□□□□□ -1.71
BRCA1-212ENST00000473961 LSM4Q9Y4Z0 139 aaKnown RBP4.36□□□□□ -1.71
BRCA1-212ENST00000473961 OR2A25A4D2G3 310 aa4.35□□□□□ -1.71
BRCA1-212ENST00000473961 GAGE12JA6NER3 117 aa4.35□□□□□ -1.71
BRCA1-212ENST00000473961 UBE2CO00762 179 aa4.35□□□□□ -1.71
BRCA1-212ENST00000473961 HSPB6O14558 160 aa4.35□□□□□ -1.71
BRCA1-212ENST00000473961 CLGNO14967 610 aa4.35□□□□□ -1.71
BRCA1-212ENST00000473961 IPO8O15397 1037 aaKnown RBP4.35□□□□□ -1.71
BRCA1-212ENST00000473961 GGPS1O95749 300 aa4.35□□□□□ -1.71
BRCA1-212ENST00000473961 HSPA4LO95757 839 aa4.35□□□□□ -1.71
BRCA1-212ENST00000473961 VDRP11473 427 aa4.35□□□□□ -1.71
BRCA1-212ENST00000473961 DDX5P17844 614 aaKnown RBP4.35□□□□□ -1.71
BRCA1-212ENST00000473961 ITGAXP20702 1163 aa4.35□□□□□ -1.71
BRCA1-212ENST00000473961 EDN2P20800 178 aa4.35□□□□□ -1.71
BRCA1-212ENST00000473961 AGAP20933 346 aa4.35□□□□□ -1.71
BRCA1-212ENST00000473961 GPTP24298 496 aa4.35□□□□□ -1.71
BRCA1-212ENST00000473961 RAD23AP54725 363 aa4.35□□□□□ -1.71
BRCA1-212ENST00000473961 RAD23BP54727 409 aa4.35□□□□□ -1.71
BRCA1-212ENST00000473961 INHBCP55103 352 aa4.35□□□□□ -1.71
BRCA1-212ENST00000473961 ID2Q02363 134 aa4.35□□□□□ -1.71
BRCA1-212ENST00000473961 FOXF2Q12947 444 aa4.35□□□□□ -1.71
BRCA1-212ENST00000473961 GRIK3Q13003 919 aa4.35□□□□□ -1.71
BRCA1-212ENST00000473961 NAE1Q13564 534 aa4.35□□□□□ -1.71
BRCA1-212ENST00000473961 KCNC3Q14003 757 aa4.35□□□□□ -1.71
BRCA1-212ENST00000473961 ESCO2Q56NI9 601 aa4.35□□□□□ -1.71
BRCA1-212ENST00000473961 C6orf10Q5SRN2 563 aa4.35□□□□□ -1.71
BRCA1-212ENST00000473961 PRAMEF19Q5SWL8 479 aa4.35□□□□□ -1.71
BRCA1-212ENST00000473961 HECTD3Q5T447 861 aa4.35□□□□□ -1.71
BRCA1-212ENST00000473961 ERMARDQ5T6L9 678 aa4.35□□□□□ -1.71
BRCA1-212ENST00000473961 STRIP1Q5VSL9 837 aa4.35□□□□□ -1.71
BRCA1-212ENST00000473961 ADALQ6DHV7 355 aa4.35□□□□□ -1.71
BRCA1-212ENST00000473961 HEPHL1Q6MZM0 1159 aa4.35□□□□□ -1.71
BRCA1-212ENST00000473961 LRRC8EQ6NSJ5 796 aa4.35□□□□□ -1.71
BRCA1-212ENST00000473961 ZNF627Q7L945 461 aa4.35□□□□□ -1.71
BRCA1-212ENST00000473961 BHLHA9Q7RTU4 235 aa4.35□□□□□ -1.71
BRCA1-212ENST00000473961 CACNA2D4Q7Z3S7 1137 aa4.35□□□□□ -1.71
BRCA1-212ENST00000473961 SLFN11Q7Z7L1 901 aa4.35□□□□□ -1.71
BRCA1-212ENST00000473961 PATL1Q86TB9 770 aaKnown RBP4.35□□□□□ -1.71
BRCA1-212ENST00000473961 GLCCI1Q86VQ1 547 aa4.35□□□□□ -1.71
BRCA1-212ENST00000473961 SFTPA2Q8IWL1 248 aa4.35□□□□□ -1.71
BRCA1-212ENST00000473961 FAM217AQ8IXS0 508 aa4.35□□□□□ -1.71
BRCA1-212ENST00000473961 MINDY1Q8N5J2 469 aa4.35□□□□□ -1.71
BRCA1-212ENST00000473961 PARP16Q8N5Y8 322 aa4.35□□□□□ -1.71
BRCA1-212ENST00000473961 GPR150Q8NGU9 434 aa4.35□□□□□ -1.71
BRCA1-212ENST00000473961 SNAPC3Q92966 411 aa4.35□□□□□ -1.71
BRCA1-212ENST00000473961 RMDN1Q96DB5 314 aa4.35□□□□□ -1.71
BRCA1-212ENST00000473961 MSI2Q96DH6 328 aaKnown RBP4.35□□□□□ -1.71
BRCA1-212ENST00000473961 RRNAD1Q96FB5 475 aaKnown RBP4.35□□□□□ -1.71
BRCA1-212ENST00000473961 RAB3IPQ96QF0 476 aaPredicted RBP4.35□□□□□ -1.71
BRCA1-212ENST00000473961 FAM110AQ9BQ89 295 aa4.35□□□□□ -1.71
BRCA1-212ENST00000473961 SCNM1Q9BWG6 230 aa4.35□□□□□ -1.71
BRCA1-212ENST00000473961 KLHL4Q9C0H6 718 aa4.35□□□□□ -1.71
BRCA1-212ENST00000473961 B3GNT4Q9C0J1 378 aa4.35□□□□□ -1.71
BRCA1-212ENST00000473961 ARGLU1Q9NWB6 273 aaPredicted RBP4.35□□□□□ -1.71
BRCA1-212ENST00000473961 FBXW11Q9UKB1 542 aa4.35□□□□□ -1.71
BRCA1-212ENST00000473961 CEPT1Q9Y6K0 416 aa4.35□□□□□ -1.71
BRCA1-212ENST00000473961 FAM90A8PA6NJQ4 464 aa4.34□□□□□ -1.71
BRCA1-212ENST00000473961 PSMA7O14818 248 aa4.34□□□□□ -1.71
BRCA1-212ENST00000473961 WNT1P04628 370 aa4.34□□□□□ -1.71
BRCA1-212ENST00000473961 PRKCGP05129 697 aa4.34□□□□□ -1.71
BRCA1-212ENST00000473961 CCDC175P0C221 793 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms