RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 RPL10P27635 214 aaKnown RBP10.98□□□□□ -0.65
C9orf3-214ENST00000473778 CCR1P32246 355 aa10.98□□□□□ -0.65
C9orf3-214ENST00000473778 CD86P42081 329 aa10.98□□□□□ -0.65
C9orf3-214ENST00000473778 SLC12A2P55011 1212 aa10.98□□□□□ -0.65
C9orf3-214ENST00000473778 INHBCP55103 352 aa10.98□□□□□ -0.65
C9orf3-214ENST00000473778 FOXA1P55317 472 aa10.98□□□□□ -0.65
C9orf3-214ENST00000473778 MAP2K5Q13163 448 aa10.98□□□□□ -0.65
C9orf3-214ENST00000473778 SLC14A2Q15849 920 aa10.98□□□□□ -0.65
C9orf3-214ENST00000473778 FAM83EQ2M2I3 478 aa10.98□□□□□ -0.65
C9orf3-214ENST00000473778 UGT3A2Q3SY77 523 aa10.98□□□□□ -0.65
C9orf3-214ENST00000473778 ALFQ53S48 1182 aa10.98□□□□□ -0.65
C9orf3-214ENST00000473778 HECTD2Q5U5R9 776 aa10.98□□□□□ -0.65
C9orf3-214ENST00000473778 LARP4Q71RC2 724 aaKnown RBP eCLIP10.98□□□□□ -0.65
C9orf3-214ENST00000473778 DGCR14Q96DF8 476 aaKnown RBP10.98□□□□□ -0.65
C9orf3-214ENST00000473778 CCDC97Q96F63 343 aaPredicted RBP10.98□□□□□ -0.65
C9orf3-214ENST00000473778 HMCESQ96FZ2 354 aa10.98□□□□□ -0.65
C9orf3-214ENST00000473778 MPP4Q96JB8 637 aa10.98□□□□□ -0.65
C9orf3-214ENST00000473778 NT5MQ9NPB1 228 aa10.98□□□□□ -0.65
C9orf3-214ENST00000473778 CRYL1Q9Y2S2 319 aa10.98□□□□□ -0.65
C9orf3-214ENST00000473778 AP4S1Q9Y587 144 aa10.98□□□□□ -0.65
C9orf3-214ENST00000473778 SCN10AQ9Y5Y9 1956 aa10.98□□□□□ -0.65
C9orf3-214ENST00000473778 CROCCQ5TZA2 2017 aa10.98□□□□□ -0.65
C9orf3-214ENST00000473778 A0A1W2PQH9 124 aa10.98□□□□□ -0.65
C9orf3-214ENST00000473778 FGF10O15520 208 aaPredicted RBP10.98□□□□□ -0.65
C9orf3-214ENST00000473778 SIX3O95343 332 aaPredicted RBP10.98□□□□□ -0.65
C9orf3-214ENST00000473778 ODC1P11926 461 aa10.98□□□□□ -0.65
C9orf3-214ENST00000473778 SH3BP2P78314 561 aa10.98□□□□□ -0.65
C9orf3-214ENST00000473778 RHDQ02161 417 aa10.98□□□□□ -0.65
C9orf3-214ENST00000473778 CACNB2Q08289 660 aaPredicted RBP10.98□□□□□ -0.65
C9orf3-214ENST00000473778 IKBKEQ14164 716 aa10.98□□□□□ -0.65
C9orf3-214ENST00000473778 BRMS1LQ5PSV4 323 aa10.98□□□□□ -0.65
C9orf3-214ENST00000473778 SCML4Q8N228 414 aa10.98□□□□□ -0.65
C9orf3-214ENST00000473778 PGBD5Q8N414 524 aa10.98□□□□□ -0.65
C9orf3-214ENST00000473778 OR52K2Q8NGK3 314 aa10.98□□□□□ -0.65
C9orf3-214ENST00000473778 EME1Q96AY2 570 aa10.98□□□□□ -0.65
C9orf3-214ENST00000473778 IMP4Q96G21 291 aaKnown RBP10.98□□□□□ -0.65
C9orf3-214ENST00000473778 CIB1Q99828 191 aa10.98□□□□□ -0.65
C9orf3-214ENST00000473778 YIPF2Q9BWQ6 316 aa10.98□□□□□ -0.65
C9orf3-214ENST00000473778 TRIM8Q9BZR9 551 aa10.98□□□□□ -0.65
C9orf3-214ENST00000473778 CATSPERBQ9H7T0 1116 aa10.98□□□□□ -0.65
C9orf3-214ENST00000473778 ARNT2Q9HBZ2 717 aa10.98□□□□□ -0.65
C9orf3-214ENST00000473778 TRAF6Q9Y4K3 522 aa10.98□□□□□ -0.65
C9orf3-214ENST00000473778 TCRBV3S1A0A5B6 114 aa10.97□□□□□ -0.65
C9orf3-214ENST00000473778 PFDN1O60925 122 aa10.97□□□□□ -0.65
C9orf3-214ENST00000473778 TRPA1O75762 1119 aa10.97□□□□□ -0.65
C9orf3-214ENST00000473778 TNFAIP8O95379 198 aa10.97□□□□□ -0.65
C9orf3-214ENST00000473778 S1PR4O95977 384 aa10.97□□□□□ -0.65
C9orf3-214ENST00000473778 CYP11A1P05108 521 aa10.97□□□□□ -0.65
C9orf3-214ENST00000473778 PAMP19021 973 aa10.97□□□□□ -0.65
C9orf3-214ENST00000473778 CYP2C18P33260 490 aa10.97□□□□□ -0.65
C9orf3-214ENST00000473778 GPR15P49685 360 aa10.97□□□□□ -0.65
C9orf3-214ENST00000473778 NME5P56597 212 aa10.97□□□□□ -0.65
C9orf3-214ENST00000473778 SQLEQ14534 574 aa10.97□□□□□ -0.65
C9orf3-214ENST00000473778 SEMA3AQ14563 771 aa10.97□□□□□ -0.65
C9orf3-214ENST00000473778 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.97□□□□□ -0.65
C9orf3-214ENST00000473778 UNC50Q53HI1 259 aa10.97□□□□□ -0.65
C9orf3-214ENST00000473778 ZNF678Q5SXM1 525 aa10.97□□□□□ -0.65
C9orf3-214ENST00000473778 ZNF549Q6P9A3 640 aa10.97□□□□□ -0.65
C9orf3-214ENST00000473778 CXCL17Q6UXB2 119 aa10.97□□□□□ -0.65
C9orf3-214ENST00000473778 HERC6Q8IVU3 1022 aa10.97□□□□□ -0.65
C9orf3-214ENST00000473778 ZNF683Q8IZ20 524 aa10.97□□□□□ -0.65
C9orf3-214ENST00000473778 MYO1HQ8N1T3 1032 aa10.97□□□□□ -0.65
C9orf3-214ENST00000473778 HDAC10Q969S8 669 aa10.97□□□□□ -0.65
C9orf3-214ENST00000473778 ZNF597Q96LX8 424 aa10.97□□□□□ -0.65
C9orf3-214ENST00000473778 RANBP9Q96S59 729 aa10.97□□□□□ -0.65
C9orf3-214ENST00000473778 PARK7Q99497 189 aaKnown RBP10.97□□□□□ -0.65
C9orf3-214ENST00000473778 SLX1AQ9BQ83 275 aa10.97□□□□□ -0.65
C9orf3-214ENST00000473778 SPAG4Q9NPE6 437 aa10.97□□□□□ -0.65
C9orf3-214ENST00000473778 ABCC13Q9NSE7 274 aa10.97□□□□□ -0.65
C9orf3-214ENST00000473778 TMEM181Q9P2C4 612 aa10.97□□□□□ -0.65
C9orf3-214ENST00000473778 HSFX1Q9UBD0 423 aa10.97□□□□□ -0.65
C9orf3-214ENST00000473778 VWA7Q9Y334 891 aa10.97□□□□□ -0.65
C9orf3-214ENST00000473778 DNAJC15Q9Y5T4 150 aa10.97□□□□□ -0.65
C9orf3-214ENST00000473778 MROH6A6NGR9 719 aa10.97□□□□□ -0.65
C9orf3-214ENST00000473778 SUPT7LO94864 414 aa10.97□□□□□ -0.65
C9orf3-214ENST00000473778 FAM58BPP0C7Q3 252 aa10.97□□□□□ -0.65
C9orf3-214ENST00000473778 PRSS56P0CW18 603 aa10.97□□□□□ -0.65
C9orf3-214ENST00000473778 CKMT2P17540 419 aa10.97□□□□□ -0.65
C9orf3-214ENST00000473778 CHRM3P20309 590 aa10.97□□□□□ -0.65
C9orf3-214ENST00000473778 RPL9P32969 192 aaKnown RBP10.97□□□□□ -0.65
C9orf3-214ENST00000473778 SERPINH1P50454 418 aaKnown RBP10.97□□□□□ -0.65
C9orf3-214ENST00000473778 MLLT6P55198 1093 aaPredicted RBP10.97□□□□□ -0.65
C9orf3-214ENST00000473778 ACAP2Q15057 778 aa10.97□□□□□ -0.65
C9orf3-214ENST00000473778 FBXO48Q5FWF7 155 aa10.97□□□□□ -0.65
C9orf3-214ENST00000473778 AGAP9Q5VTM2 703 aa10.97□□□□□ -0.65
C9orf3-214ENST00000473778 KIAA0408Q6ZU52 694 aa10.97□□□□□ -0.65
C9orf3-214ENST00000473778 LZTR1Q8N653 840 aa10.97□□□□□ -0.65
C9orf3-214ENST00000473778 RSPH1Q8WYR4 309 aa10.97□□□□□ -0.65
C9orf3-214ENST00000473778 LZICQ8WZA0 190 aa10.97□□□□□ -0.65
C9orf3-214ENST00000473778 EXT2Q93063 718 aa10.97□□□□□ -0.65
C9orf3-214ENST00000473778 PSMG2Q969U7 264 aa10.97□□□□□ -0.65
C9orf3-214ENST00000473778 TMIGD2Q96BF3 282 aa10.97□□□□□ -0.65
C9orf3-214ENST00000473778 NSUN5Q96P11 429 aaKnown RBP10.97□□□□□ -0.65
C9orf3-214ENST00000473778 SLC25A51Q9H1U9 297 aa10.97□□□□□ -0.65
C9orf3-214ENST00000473778 NOL11Q9H8H0 719 aaKnown RBP10.97□□□□□ -0.65
C9orf3-214ENST00000473778 DDX18Q9NVP1 670 aaKnown RBP10.97□□□□□ -0.65
C9orf3-214ENST00000473778 RHBDL2Q9NX52 303 aa10.97□□□□□ -0.65
C9orf3-214ENST00000473778 EPS15L1Q9UBC2 864 aa10.97□□□□□ -0.65
C9orf3-214ENST00000473778 GIT1Q9Y2X7 761 aa10.97□□□□□ -0.65
C9orf3-214ENST00000473778 TRPV2Q9Y5S1 764 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms