RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 CCT8P50990 548 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 ATXN3P54252 364 aaPredicted RBP6.13□□□□□ -1.43
HERC4-209ENST00000473533 ZNF846Q147U1 533 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 XKR4Q5GH76 650 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 OTUD1Q5VV17 481 aaPredicted RBP6.13□□□□□ -1.43
HERC4-209ENST00000473533 ZNF772Q68DY9 489 aaPredicted RBP6.13□□□□□ -1.43
HERC4-209ENST00000473533 CNSTQ6PJW8 725 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 SAMD7Q7Z3H4 446 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 PTRH1Q86Y79 214 aaKnown RBP6.13□□□□□ -1.43
HERC4-209ENST00000473533 DCP1BQ8IZD4 617 aaKnown RBP6.13□□□□□ -1.43
HERC4-209ENST00000473533 RHEBL1Q8TAI7 183 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 SLCO4A1Q96BD0 722 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 SMARCD1Q96GM5 515 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 PLEKHA8Q96JA3 519 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 KCTD14Q9BQ13 255 aaPredicted RBP6.13□□□□□ -1.43
HERC4-209ENST00000473533 ULBP1Q9BZM6 244 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 UNKQ9C0B0 810 aaKnown RBP6.13□□□□□ -1.43
HERC4-209ENST00000473533 ING2Q9H160 280 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 TUT1Q9H6E5 874 aaKnown RBP6.13□□□□□ -1.43
HERC4-209ENST00000473533 WDR6Q9NNW5 1121 aaKnown RBP6.13□□□□□ -1.43
HERC4-209ENST00000473533 HMG20AQ9NP66 347 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 TREX1Q9NSU2 369 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 SCHIP1Q9P0W5 487 aaPredicted RBP6.13□□□□□ -1.43
HERC4-209ENST00000473533 CDH9Q9ULB4 789 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 VPS9D1Q9Y2B5 631 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 COQ6Q9Y2Z9 468 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 VWA7Q9Y334 891 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 ZNF711Q9Y462 761 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 SNX5Q9Y5X3 404 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 A0A0G2JLL6 359 aaPredicted RBP6.13□□□□□ -1.43
HERC4-209ENST00000473533 SMIM35A0A1B0GVV1 85 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 RBM47A0AV96 593 aaKnown RBP6.13□□□□□ -1.43
HERC4-209ENST00000473533 TTC24A2A3L6 582 aaPredicted RBP6.13□□□□□ -1.43
HERC4-209ENST00000473533 TRIM64BA6NI03 449 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 NR5A2O00482 541 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 AZIN1O14977 448 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 ATP6V1G1O75348 118 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 CPNE6O95741 557 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 FGFR3P22607 806 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 GRIK1P39086 918 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 ENTPD1P49961 510 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 SCNN1BP51168 640 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 RENBPP51606 427 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 TPD52P55327 224 aaPredicted RBP6.13□□□□□ -1.43
HERC4-209ENST00000473533 RALGDSQ12967 914 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 MTA1Q13330 715 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 GK3PQ14409 553 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 POU6F1Q14863 301 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 BTBD8Q5XKL5 378 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 OGFOD2Q6N063 350 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 HMBOX1Q6NT76 420 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 MRNIPQ6NTE8 343 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 TXNDC11Q6PKC3 985 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 CLEC20AQ6ZU45 233 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 PRRT2Q7Z6L0 340 aaPredicted RBP6.13□□□□□ -1.43
HERC4-209ENST00000473533 ZNF467Q7Z7K2 595 aaPredicted RBP6.13□□□□□ -1.43
HERC4-209ENST00000473533 GALNT13Q8IUC8 556 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 DDIASQ8IXT1 998 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 ZNF555Q8NEP9 628 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 CHPT1Q8WUD6 406 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 HSPBAP1Q96EW2 488 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 SLC29A1Q99808 456 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 APOL2Q9BQE5 337 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 BEGAINQ9BUH8 593 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 MFSD1Q9H3U5 465 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 RPF2Q9H7B2 306 aaKnown RBP6.13□□□□□ -1.43
HERC4-209ENST00000473533 GPN2Q9H9Y4 310 aaPredicted RBP6.13□□□□□ -1.43
HERC4-209ENST00000473533 SMOXQ9NWM0 555 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 FIS1Q9Y3D6 152 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 GJA3Q9Y6H8 435 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 FNDC1Q4ZHG4 1894 aaPredicted RBP6.13□□□□□ -1.43
HERC4-209ENST00000473533 SMIM28A0A1B0GU29 152 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 H3BMQ9 156 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 SOCS2O14508 198 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 TBC1D4O60343 1298 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 HNRNPLP14866 589 aaKnown RBP eCLIP6.13□□□□□ -1.433e-6■■□□□ 11.8
HERC4-209ENST00000473533 GPX3P22352 226 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 HTR1EP28566 365 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 RFC2P35250 354 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 ABCG1P45844 678 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 SERPINH1P50454 418 aaKnown RBP6.13□□□□□ -1.43
HERC4-209ENST00000473533 CTBP1Q13363 440 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 NFYCQ13952 458 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 MAPRE1Q15691 268 aaKnown RBP6.13□□□□□ -1.43
HERC4-209ENST00000473533 CYP51A1Q16850 503 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 RAB41Q5JT25 222 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 ZNF678Q5SXM1 525 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 TSTD2Q5T7W7 516 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 HECTD2Q5U5R9 776 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 FAM156AQ8NDB6 213 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 ADAM32Q8TC27 787 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 UBXN10Q96LJ8 280 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 COG8Q96MW5 612 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 OMDQ99983 421 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 OSBPL10Q9BXB5 764 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 SEZ6LQ9BYH1 1024 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 TKTL2Q9H0I9 626 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 SLC25A51Q9H1U9 297 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 GSTO2Q9H4Y5 243 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 TFB2MQ9H5Q4 396 aaKnown RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms