RNA–Protein interactions for RNA: ENST00000472880.1

COL9A3-210, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-210ENST00000472880 A0A1B0GTH6 734 aa19.82■□□□□ 0.76
COL9A3-210ENST00000472880 TMEM202A6NGA9 273 aa19.82■□□□□ 0.76
COL9A3-210ENST00000472880 A8MX80 341 aa19.82■□□□□ 0.76
COL9A3-210ENST00000472880 ITGA2BP08514 1039 aa19.82■□□□□ 0.76
COL9A3-210ENST00000472880 SKILP12757 684 aa19.82■□□□□ 0.76
COL9A3-210ENST00000472880 HSPA9P38646 679 aaKnown RBP19.82■□□□□ 0.76
COL9A3-210ENST00000472880 CCL7P80098 99 aa19.82■□□□□ 0.76
COL9A3-210ENST00000472880 RHDQ02161 417 aa19.82■□□□□ 0.76
COL9A3-210ENST00000472880 SLC10A7Q0GE19 358 aa19.82■□□□□ 0.76
COL9A3-210ENST00000472880 DPYSL2Q16555 572 aa19.82■□□□□ 0.76
COL9A3-210ENST00000472880 TAF1BQ53T94 588 aaPredicted RBP19.82■□□□□ 0.76
COL9A3-210ENST00000472880 KCTD16Q68DU8 428 aa19.82■□□□□ 0.76
COL9A3-210ENST00000472880 TAF8Q7Z7C8 310 aa19.82■□□□□ 0.76
COL9A3-210ENST00000472880 CLEC14AQ86T13 490 aa19.82■□□□□ 0.76
COL9A3-210ENST00000472880 BBS5Q8N3I7 341 aa19.82■□□□□ 0.76
COL9A3-210ENST00000472880 PDCD6IPQ8WUM4 868 aaKnown RBP19.82■□□□□ 0.76
COL9A3-210ENST00000472880 HSPH1Q92598 858 aa19.82■□□□□ 0.76
COL9A3-210ENST00000472880 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.82■□□□□ 0.76
COL9A3-210ENST00000472880 B4GALT6Q9UBX8 382 aa19.82■□□□□ 0.76
COL9A3-210ENST00000472880 MOSPD1Q9UJG1 213 aa19.82■□□□□ 0.76
COL9A3-210ENST00000472880 A0A1W2PQ67 120 aa19.81■□□□□ 0.76
COL9A3-210ENST00000472880 TMX2-CTNND1H3BSU7 103 aa19.81■□□□□ 0.76
COL9A3-210ENST00000472880 TNFRSF10CO14798 259 aa19.81■□□□□ 0.76
COL9A3-210ENST00000472880 SOCS5O75159 536 aa19.81■□□□□ 0.76
COL9A3-210ENST00000472880 CPP00450 1065 aa19.81■□□□□ 0.76
COL9A3-210ENST00000472880 SERPINC1P01008 464 aa19.81■□□□□ 0.76
COL9A3-210ENST00000472880 HOXC4P09017 264 aaPredicted RBP19.81■□□□□ 0.76
COL9A3-210ENST00000472880 NFKBIAP25963 317 aa19.81■□□□□ 0.76
COL9A3-210ENST00000472880 IL1R2P27930 398 aa19.81■□□□□ 0.76
COL9A3-210ENST00000472880 ZNF165P49910 485 aa19.81■□□□□ 0.76
COL9A3-210ENST00000472880 SKOR1P84550 965 aa19.81■□□□□ 0.76
COL9A3-210ENST00000472880 VAC14Q08AM6 782 aa19.81■□□□□ 0.76
COL9A3-210ENST00000472880 EIF3IQ13347 325 aaKnown RBP19.81■□□□□ 0.76
COL9A3-210ENST00000472880 BOLA3Q53S33 107 aa19.81■□□□□ 0.76
COL9A3-210ENST00000472880 TDRD12Q587J7 1177 aaKnown RBP19.81■□□□□ 0.76
COL9A3-210ENST00000472880 CAVIN1Q6NZI2 390 aaKnown RBP19.81■□□□□ 0.76
COL9A3-210ENST00000472880 B3GNT8Q7Z7M8 397 aa19.81■□□□□ 0.76
COL9A3-210ENST00000472880 CCNJLQ8IV13 435 aa19.81■□□□□ 0.76
COL9A3-210ENST00000472880 ATPAF2Q8N5M1 289 aa19.81■□□□□ 0.76
COL9A3-210ENST00000472880 FAM46DQ8NEK8 389 aa19.81■□□□□ 0.76
COL9A3-210ENST00000472880 GPR156Q8NFN8 814 aa19.81■□□□□ 0.76
COL9A3-210ENST00000472880 NUS1Q96E22 293 aa19.81■□□□□ 0.76
COL9A3-210ENST00000472880 MRPL40Q9NQ50 206 aaKnown RBP19.81■□□□□ 0.76
COL9A3-210ENST00000472880 TTC24A2A3L6 582 aaPredicted RBP19.8■□□□□ 0.76
COL9A3-210ENST00000472880 B4DGG1 531 aa19.8■□□□□ 0.76
COL9A3-210ENST00000472880 PDE2AO00408 941 aaPredicted RBP19.8■□□□□ 0.76
COL9A3-210ENST00000472880 PLD2O14939 933 aa19.8■□□□□ 0.76
COL9A3-210ENST00000472880 GM2AP17900 193 aa19.8■□□□□ 0.76
COL9A3-210ENST00000472880 AMPD1P23109 780 aa19.8■□□□□ 0.76
COL9A3-210ENST00000472880 SERPINB6P35237 376 aa19.8■□□□□ 0.76
COL9A3-210ENST00000472880 TRIM23P36406 574 aa19.8■□□□□ 0.76
COL9A3-210ENST00000472880 INHBCP55103 352 aa19.8■□□□□ 0.76
COL9A3-210ENST00000472880 TSR1Q2NL82 804 aaKnown RBP19.8■□□□□ 0.76
COL9A3-210ENST00000472880 PNCKQ6P2M8 343 aa19.8■□□□□ 0.76
COL9A3-210ENST00000472880 RAB11FIP2Q7L804 512 aa19.8■□□□□ 0.76
COL9A3-210ENST00000472880 FBXO39Q8N4B4 442 aa19.8■□□□□ 0.76
COL9A3-210ENST00000472880 NSMCE1Q8WV22 266 aa19.8■□□□□ 0.76
COL9A3-210ENST00000472880 SPOCK2Q92563 424 aa19.8■□□□□ 0.76
COL9A3-210ENST00000472880 NSMCE3Q96MG7 304 aa19.8■□□□□ 0.76
COL9A3-210ENST00000472880 TMEM74Q96NL1 305 aa19.8■□□□□ 0.76
COL9A3-210ENST00000472880 NAP1L5Q96NT1 182 aaPredicted RBP19.8■□□□□ 0.76
COL9A3-210ENST00000472880 CSPG4P5Q96PW8 444 aa19.8■□□□□ 0.76
COL9A3-210ENST00000472880 NUDCD1Q96RS6 583 aa19.8■□□□□ 0.76
COL9A3-210ENST00000472880 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.8■□□□□ 0.76
COL9A3-210ENST00000472880 FOXP3Q9BZS1 431 aa19.8■□□□□ 0.76
COL9A3-210ENST00000472880 TMEM168Q9H0V1 697 aa19.8■□□□□ 0.76
COL9A3-210ENST00000472880 ISCUQ9H1K1 167 aa19.8■□□□□ 0.76
COL9A3-210ENST00000472880 LRRN3Q9H3W5 708 aa19.8■□□□□ 0.76
COL9A3-210ENST00000472880 CYP4F12Q9HCS2 524 aa19.8■□□□□ 0.76
COL9A3-210ENST00000472880 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.8■□□□□ 0.76
COL9A3-210ENST00000472880 PCDHGC4Q9Y5F7 938 aa19.8■□□□□ 0.76
COL9A3-210ENST00000472880 A0A1W2PQM1 296 aa19.79■□□□□ 0.76
COL9A3-210ENST00000472880 PRSS38A1L453 326 aa19.79■□□□□ 0.76
COL9A3-210ENST00000472880 HTRA2O43464 458 aaPredicted RBP19.79■□□□□ 0.76
COL9A3-210ENST00000472880 MYCLP1P12525 358 aaPredicted RBP19.79■□□□□ 0.76
COL9A3-210ENST00000472880 TCF4P15884 667 aa19.79■□□□□ 0.76
COL9A3-210ENST00000472880 GLB1P16278 677 aa19.79■□□□□ 0.76
COL9A3-210ENST00000472880 VIPR1P32241 457 aa19.79■□□□□ 0.76
COL9A3-210ENST00000472880 PIGHQ14442 188 aaPredicted RBP19.79■□□□□ 0.76
COL9A3-210ENST00000472880 CNGA3Q16281 694 aa19.79■□□□□ 0.76
COL9A3-210ENST00000472880 C14orf28Q4W4Y0 310 aa19.79■□□□□ 0.76
COL9A3-210ENST00000472880 CERCAMQ5T4B2 595 aa19.79■□□□□ 0.76
COL9A3-210ENST00000472880 POLNQ7Z5Q5 900 aa19.79■□□□□ 0.76
COL9A3-210ENST00000472880 JAMLQ86YT9 394 aa19.79■□□□□ 0.76
COL9A3-210ENST00000472880 Q8N9G6 341 aaPredicted RBP19.79■□□□□ 0.76
COL9A3-210ENST00000472880 COQ10AQ96MF6 247 aa19.79■□□□□ 0.76
COL9A3-210ENST00000472880 MGME1Q9BQP7 344 aa19.79■□□□□ 0.76
COL9A3-210ENST00000472880 LGR4Q9BXB1 951 aa19.79■□□□□ 0.76
COL9A3-210ENST00000472880 DPEP2Q9H4A9 486 aa19.79■□□□□ 0.76
COL9A3-210ENST00000472880 PHPT1Q9NRX4 125 aaPredicted RBP19.79■□□□□ 0.76
COL9A3-210ENST00000472880 ETNK2Q9NVF9 386 aa19.79■□□□□ 0.76
COL9A3-210ENST00000472880 KCTD5Q9NXV2 234 aa19.79■□□□□ 0.76
COL9A3-210ENST00000472880 NOBOXO60393 691 aa19.78■□□□□ 0.76
COL9A3-210ENST00000472880 PEX11BO96011 259 aa19.78■□□□□ 0.76
COL9A3-210ENST00000472880 CYP2A6P11509 494 aaPredicted RBP19.78■□□□□ 0.76
COL9A3-210ENST00000472880 CR2P20023 1033 aa19.78■□□□□ 0.76
COL9A3-210ENST00000472880 CCKBRP32239 447 aa19.78■□□□□ 0.76
COL9A3-210ENST00000472880 UGT1A5P35504 534 aa19.78■□□□□ 0.76
COL9A3-210ENST00000472880 CFHR1Q03591 330 aa19.78■□□□□ 0.76
COL9A3-210ENST00000472880 FIGNQ5HY92 759 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms