RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.5■□□□□ 0.71
COMMD1-208ENST00000472729 ZNF487B1APH4 448 aa19.49■□□□□ 0.71
COMMD1-208ENST00000472729 PPP1R12AO14974 1030 aaPredicted RBP19.49■□□□□ 0.71
COMMD1-208ENST00000472729 GP1BAP07359 652 aa19.49■□□□□ 0.71
COMMD1-208ENST00000472729 NAP1L1P55209 391 aaKnown RBP19.49■□□□□ 0.71
COMMD1-208ENST00000472729 AP1B1Q10567 949 aa19.49■□□□□ 0.71
COMMD1-208ENST00000472729 TRAF2Q12933 501 aa19.49■□□□□ 0.71
COMMD1-208ENST00000472729 RALGDSQ12967 914 aa19.49■□□□□ 0.71
COMMD1-208ENST00000472729 PDK1Q15118 436 aa19.49■□□□□ 0.71
COMMD1-208ENST00000472729 VSIG1Q86XK7 387 aa19.49■□□□□ 0.71
COMMD1-208ENST00000472729 GKN2Q86XP6 184 aa19.49■□□□□ 0.71
COMMD1-208ENST00000472729 MARCH9Q86YJ5 346 aa19.49■□□□□ 0.71
COMMD1-208ENST00000472729 TC2NQ8N9U0 490 aa19.49■□□□□ 0.71
COMMD1-208ENST00000472729 MAPK15Q8TD08 544 aa19.49■□□□□ 0.71
COMMD1-208ENST00000472729 SPOCK2Q92563 424 aa19.49■□□□□ 0.71
COMMD1-208ENST00000472729 FATE1Q969F0 183 aa19.49■□□□□ 0.71
COMMD1-208ENST00000472729 TSACCQ96A04 125 aaPredicted RBP19.49■□□□□ 0.71
COMMD1-208ENST00000472729 RNF25Q96BH1 459 aaPredicted RBP19.49■□□□□ 0.71
COMMD1-208ENST00000472729 SCRN2Q96FV2 425 aa19.49■□□□□ 0.71
COMMD1-208ENST00000472729 DTLQ9NZJ0 730 aa19.49■□□□□ 0.71
COMMD1-208ENST00000472729 DNPEPQ9ULA0 475 aa19.49■□□□□ 0.71
COMMD1-208ENST00000472729 AK5Q9Y6K8 562 aa19.49■□□□□ 0.71
COMMD1-208ENST00000472729 LMO7DNF2Z398 122 aa19.48■□□□□ 0.71
COMMD1-208ENST00000472729 TSHRP16473 764 aa19.48■□□□□ 0.71
COMMD1-208ENST00000472729 COMTP21964 271 aa19.48■□□□□ 0.71
COMMD1-208ENST00000472729 DYNLT1P63172 113 aa19.48■□□□□ 0.71
COMMD1-208ENST00000472729 CDKN3Q16667 212 aa19.48■□□□□ 0.71
COMMD1-208ENST00000472729 PNCKQ6P2M8 343 aa19.48■□□□□ 0.71
COMMD1-208ENST00000472729 SDR16C5Q8N3Y7 309 aa19.48■□□□□ 0.71
COMMD1-208ENST00000472729 PQLC3Q8N755 202 aa19.48■□□□□ 0.71
COMMD1-208ENST00000472729 OR56A4Q8NGH8 313 aa19.48■□□□□ 0.71
COMMD1-208ENST00000472729 MAML1Q92585 1016 aa19.48■□□□□ 0.71
COMMD1-208ENST00000472729 HDAC11Q96DB2 347 aa19.48■□□□□ 0.71
COMMD1-208ENST00000472729 NXPE2Q96DL1 559 aa19.48■□□□□ 0.71
COMMD1-208ENST00000472729 MRFAP1L1Q96HT8 127 aa19.48■□□□□ 0.71
COMMD1-208ENST00000472729 LRRC61Q9BV99 259 aa19.48■□□□□ 0.71
COMMD1-208ENST00000472729 PHPT1Q9NRX4 125 aaPredicted RBP19.48■□□□□ 0.71
COMMD1-208ENST00000472729 GULP1Q9UBP9 304 aa19.48■□□□□ 0.71
COMMD1-208ENST00000472729 PCDHA13Q9Y5I0 950 aa19.48■□□□□ 0.71
COMMD1-208ENST00000472729 PSMD11O00231 422 aa19.47■□□□□ 0.71
COMMD1-208ENST00000472729 YY2O15391 372 aa19.47■□□□□ 0.71
COMMD1-208ENST00000472729 HEXIM1O94992 359 aaKnown RBP19.47■□□□□ 0.71
COMMD1-208ENST00000472729 JCHAINP01591 159 aa19.47■□□□□ 0.71
COMMD1-208ENST00000472729 CTPS1P17812 591 aa19.47■□□□□ 0.71
COMMD1-208ENST00000472729 ZNF75DP51815 510 aa19.47■□□□□ 0.71
COMMD1-208ENST00000472729 DSC2Q02487 901 aa19.47■□□□□ 0.71
COMMD1-208ENST00000472729 TFDP2Q14188 446 aa19.47■□□□□ 0.71
COMMD1-208ENST00000472729 CNGA3Q16281 694 aa19.47■□□□□ 0.71
COMMD1-208ENST00000472729 LVRNQ6Q4G3 990 aa19.47■□□□□ 0.71
COMMD1-208ENST00000472729 PLA2G15Q8NCC3 412 aa19.47■□□□□ 0.71
COMMD1-208ENST00000472729 MDM1Q8TC05 714 aa19.47■□□□□ 0.71
COMMD1-208ENST00000472729 IFI44Q8TCB0 444 aa19.47■□□□□ 0.71
COMMD1-208ENST00000472729 NAT6Q93015 286 aa19.47■□□□□ 0.71
COMMD1-208ENST00000472729 PANX2Q96RD6 677 aa19.47■□□□□ 0.71
COMMD1-208ENST00000472729 LGMNQ99538 433 aa19.47■□□□□ 0.71
COMMD1-208ENST00000472729 ADGRE3Q9BY15 652 aa19.47■□□□□ 0.71
COMMD1-208ENST00000472729 BRD8Q9H0E9 1235 aa19.47■□□□□ 0.71
COMMD1-208ENST00000472729 TCEAL2Q9H3H9 227 aaPredicted RBP19.47■□□□□ 0.71
COMMD1-208ENST00000472729 SEPT10Q9P0V9 454 aa19.47■□□□□ 0.71
COMMD1-208ENST00000472729 HYOU1Q9Y4L1 999 aa19.47■□□□□ 0.71
COMMD1-208ENST00000472729 SRRM3A6NNA2 597 aaPredicted RBP19.46■□□□□ 0.71
COMMD1-208ENST00000472729 KCNK1O00180 336 aa19.46■□□□□ 0.71
COMMD1-208ENST00000472729 GCATO75600 419 aa19.46■□□□□ 0.71
COMMD1-208ENST00000472729 KRT37O76014 449 aa19.46■□□□□ 0.71
COMMD1-208ENST00000472729 MT-CO3P00414 261 aa19.46■□□□□ 0.71
COMMD1-208ENST00000472729 GIMD1P0DJR0 217 aa19.46■□□□□ 0.71
COMMD1-208ENST00000472729 MYF5P13349 255 aa19.46■□□□□ 0.71
COMMD1-208ENST00000472729 ETV3P41162 512 aa19.46■□□□□ 0.71
COMMD1-208ENST00000472729 TNNT3P45378 269 aaPredicted RBP19.46■□□□□ 0.71
COMMD1-208ENST00000472729 CLDN6P56747 220 aa19.46■□□□□ 0.71
COMMD1-208ENST00000472729 KIAA1024LP59773 190 aa19.46■□□□□ 0.71
COMMD1-208ENST00000472729 INSM1Q01101 510 aaPredicted RBP19.46■□□□□ 0.71
COMMD1-208ENST00000472729 CYP4F3Q08477 520 aa19.46■□□□□ 0.71
COMMD1-208ENST00000472729 TCEAL1Q15170 157 aa19.46■□□□□ 0.71
COMMD1-208ENST00000472729 TCEA2Q15560 299 aa19.46■□□□□ 0.71
COMMD1-208ENST00000472729 ALG11Q2TAA5 492 aa19.46■□□□□ 0.71
COMMD1-208ENST00000472729 C6orf132Q5T0Z8 1188 aa19.46■□□□□ 0.71
COMMD1-208ENST00000472729 RAET1GQ6H3X3 334 aa19.46■□□□□ 0.71
COMMD1-208ENST00000472729 EFL1Q7Z2Z2 1120 aaKnown RBP19.46■□□□□ 0.71
COMMD1-208ENST00000472729 PROSER1Q86XN7 944 aa19.46■□□□□ 0.71
COMMD1-208ENST00000472729 TMTC1Q8IUR5 882 aa19.46■□□□□ 0.71
COMMD1-208ENST00000472729 CCDC50Q8IVM0 306 aa19.46■□□□□ 0.71
COMMD1-208ENST00000472729 COQ10AQ96MF6 247 aa19.46■□□□□ 0.71
COMMD1-208ENST00000472729 RBSNQ9H1K0 784 aa19.46■□□□□ 0.71
COMMD1-208ENST00000472729 CHKBQ9Y259 395 aa19.46■□□□□ 0.71
COMMD1-208ENST00000472729 EPG5Q9HCE0 2579 aa19.46■□□□□ 0.71
COMMD1-208ENST00000472729 CHD5Q8TDI0 1954 aa19.45■□□□□ 0.7
COMMD1-208ENST00000472729 NPIPB15A6NHN6 443 aaPredicted RBP19.45■□□□□ 0.7
COMMD1-208ENST00000472729 TNFRSF10CO14798 259 aa19.45■□□□□ 0.7
COMMD1-208ENST00000472729 PSTPIP1O43586 416 aa19.45■□□□□ 0.7
COMMD1-208ENST00000472729 OPA1O60313 960 aa19.45■□□□□ 0.7
COMMD1-208ENST00000472729 HOXC4P09017 264 aaPredicted RBP19.45■□□□□ 0.7
COMMD1-208ENST00000472729 ZNF30P17039 623 aa19.45■□□□□ 0.7
COMMD1-208ENST00000472729 RPL26P61254 145 aaKnown RBP19.45■□□□□ 0.7
COMMD1-208ENST00000472729 PPIDQ08752 370 aaKnown RBP19.45■□□□□ 0.7
COMMD1-208ENST00000472729 SLC10A2Q12908 348 aaPredicted RBP19.45■□□□□ 0.7
COMMD1-208ENST00000472729 KAZNQ674X7 775 aa19.45■□□□□ 0.7
COMMD1-208ENST00000472729 SLC9A4Q6AI14 798 aa19.45■□□□□ 0.7
COMMD1-208ENST00000472729 CCDC70Q6NSX1 233 aa19.45■□□□□ 0.7
COMMD1-208ENST00000472729 TAF8Q7Z7C8 310 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms