RNA–Protein interactions for RNA: ENST00000471193.1

FN1-217, Transcript of fibronectin 1, humanhuman

TSL 3

Gene FN1, Length 496 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-217ENST00000471193 HMGB4Q8WW32 186 aa11.65□□□□□ -0.54
FN1-217ENST00000471193 CAVIN3Q969G5 261 aa11.65□□□□□ -0.54
FN1-217ENST00000471193 HHIPQ96QV1 700 aa11.65□□□□□ -0.54
FN1-217ENST00000471193 EBNA1BP2Q99848 306 aaKnown RBP11.65□□□□□ -0.54
FN1-217ENST00000471193 KIFC1Q9BW19 673 aa11.65□□□□□ -0.54
FN1-217ENST00000471193 CDC42EP4Q9H3Q1 356 aaKnown RBP11.65□□□□□ -0.54
FN1-217ENST00000471193 SAMD15Q9P1V8 674 aa11.65□□□□□ -0.54
FN1-217ENST00000471193 USP36Q9P275 1121 aaKnown RBP11.65□□□□□ -0.54
FN1-217ENST00000471193 FZD4Q9ULV1 537 aa11.65□□□□□ -0.54
FN1-217ENST00000471193 ITM2BQ9Y287 266 aa11.65□□□□□ -0.54
FN1-217ENST00000471193 ARL5AQ9Y689 179 aa11.65□□□□□ -0.54
FN1-217ENST00000471193 MAD1L1Q9Y6D9 718 aa11.65□□□□□ -0.54
FN1-217ENST00000471193 TECTAO75443 2155 aa11.64□□□□□ -0.55
FN1-217ENST00000471193 C1orf232A0A0U1RR37 186 aa11.64□□□□□ -0.55
FN1-217ENST00000471193 FAM237BA0A1B0GVD1 139 aa11.64□□□□□ -0.55
FN1-217ENST00000471193 MROH6A6NGR9 719 aa11.64□□□□□ -0.55
FN1-217ENST00000471193 AURKAO14965 403 aa11.64□□□□□ -0.55
FN1-217ENST00000471193 SLC7A4O43246 635 aa11.64□□□□□ -0.55
FN1-217ENST00000471193 PI15O43692 258 aa11.64□□□□□ -0.55
FN1-217ENST00000471193 AP1G1O43747 822 aa11.64□□□□□ -0.55
FN1-217ENST00000471193 ERLIN1O75477 346 aa11.64□□□□□ -0.55
FN1-217ENST00000471193 RNASEH2AO75792 299 aaKnown RBP11.64□□□□□ -0.55
FN1-217ENST00000471193 ALDH1A2O94788 518 aa11.64□□□□□ -0.55
FN1-217ENST00000471193 APBB3O95704 486 aa11.64□□□□□ -0.55
FN1-217ENST00000471193 CRTAMO95727 393 aa11.64□□□□□ -0.55
FN1-217ENST00000471193 ACADMP11310 421 aa11.64□□□□□ -0.55
FN1-217ENST00000471193 ZNF30P17039 623 aa11.64□□□□□ -0.55
FN1-217ENST00000471193 CCR3P51677 355 aa11.64□□□□□ -0.55
FN1-217ENST00000471193 CLCN5P51795 746 aa11.64□□□□□ -0.55
FN1-217ENST00000471193 FAM193AP78312 1265 aa11.64□□□□□ -0.55
FN1-217ENST00000471193 CCDC15Q0P6D6 951 aa11.64□□□□□ -0.55
FN1-217ENST00000471193 LAMB3Q13751 1172 aa11.64□□□□□ -0.55
FN1-217ENST00000471193 CNGA3Q16281 694 aa11.64□□□□□ -0.55
FN1-217ENST00000471193 HP1BP3Q5SSJ5 553 aaPredicted RBP11.64□□□□□ -0.55
FN1-217ENST00000471193 STEAP4Q687X5 459 aa11.64□□□□□ -0.55
FN1-217ENST00000471193 LRRC66Q68CR7 880 aa11.64□□□□□ -0.55
FN1-217ENST00000471193 ANO7Q6IWH7 933 aa11.64□□□□□ -0.55
FN1-217ENST00000471193 CASC4Q6P4E1 433 aa11.64□□□□□ -0.55
FN1-217ENST00000471193 CRTC1Q6UUV9 634 aa11.64□□□□□ -0.55
FN1-217ENST00000471193 MAMSTRQ6ZN01 415 aa11.64□□□□□ -0.55
FN1-217ENST00000471193 KBTBD6Q86V97 674 aa11.64□□□□□ -0.55
FN1-217ENST00000471193 CCNJLQ8IV13 435 aa11.64□□□□□ -0.55
FN1-217ENST00000471193 PYROXD1Q8WU10 500 aa11.64□□□□□ -0.55
FN1-217ENST00000471193 PEX13Q92968 403 aa11.64□□□□□ -0.55
FN1-217ENST00000471193 C9orf72Q96LT7 481 aa11.64□□□□□ -0.55
FN1-217ENST00000471193 OMDQ99983 421 aa11.64□□□□□ -0.55
FN1-217ENST00000471193 TRIM56Q9BRZ2 755 aaKnown RBP11.64□□□□□ -0.55
FN1-217ENST00000471193 NAT9Q9BTE0 207 aa11.64□□□□□ -0.55
FN1-217ENST00000471193 PLAC1Q9HBJ0 212 aa11.64□□□□□ -0.55
FN1-217ENST00000471193 CD93Q9NPY3 652 aa11.64□□□□□ -0.55
FN1-217ENST00000471193 FBXL12Q9NXK8 326 aa11.64□□□□□ -0.55
FN1-217ENST00000471193 NINJ2Q9NZG7 142 aa11.64□□□□□ -0.55
FN1-217ENST00000471193 BCCIPQ9P287 314 aaKnown RBP eCLIP11.64□□□□□ -0.55
FN1-217ENST00000471193 GGT7Q9UJ14 662 aa11.64□□□□□ -0.55
FN1-217ENST00000471193 RIMKLBQ9ULI2 386 aa11.64□□□□□ -0.55
FN1-217ENST00000471193 FADS3Q9Y5Q0 445 aa11.64□□□□□ -0.55
FN1-217ENST00000471193 TRIOO75962 3097 aa11.63□□□□□ -0.55
FN1-217ENST00000471193 SCN8AQ9UQD0 1980 aa11.63□□□□□ -0.55
FN1-217ENST00000471193 A0A0U1RQS6 177 aa11.63□□□□□ -0.55
FN1-217ENST00000471193 MAGEB16A2A368 324 aa11.63□□□□□ -0.55
FN1-217ENST00000471193 C2orf81A6NN90 581 aa11.63□□□□□ -0.55
FN1-217ENST00000471193 H0Y858 1186 aa11.63□□□□□ -0.55
FN1-217ENST00000471193 K7ESF4 209 aa11.63□□□□□ -0.55
FN1-217ENST00000471193 PLRG1O43660 514 aaKnown RBP11.63□□□□□ -0.55
FN1-217ENST00000471193 USP1O94782 785 aa11.63□□□□□ -0.55
FN1-217ENST00000471193 TTC4O95801 387 aa11.63□□□□□ -0.55
FN1-217ENST00000471193 IGLV3-19P01714 112 aa11.63□□□□□ -0.55
FN1-217ENST00000471193 SLC4A1P02730 911 aa11.63□□□□□ -0.55
FN1-217ENST00000471193 C1SP09871 688 aa11.63□□□□□ -0.55
FN1-217ENST00000471193 H2AFXP16104 143 aaPredicted RBP11.63□□□□□ -0.55
FN1-217ENST00000471193 TSHRP16473 764 aa11.63□□□□□ -0.55
FN1-217ENST00000471193 PSMA3P25788 255 aa11.63□□□□□ -0.55
FN1-217ENST00000471193 HMGCLP35914 325 aa11.63□□□□□ -0.55
FN1-217ENST00000471193 STC1P52823 247 aa11.63□□□□□ -0.55
FN1-217ENST00000471193 PMS2P54278 862 aa11.63□□□□□ -0.55
FN1-217ENST00000471193 ADPRHP54922 357 aa11.63□□□□□ -0.55
FN1-217ENST00000471193 TAS2R38P59533 333 aa11.63□□□□□ -0.55
FN1-217ENST00000471193 PDE1BQ01064 536 aa11.63□□□□□ -0.55
FN1-217ENST00000471193 SEMG2Q02383 582 aa11.63□□□□□ -0.55
FN1-217ENST00000471193 ACVR1Q04771 509 aa11.63□□□□□ -0.55
FN1-217ENST00000471193 SFSWAPQ12872 951 aaKnown RBP11.63□□□□□ -0.55
FN1-217ENST00000471193 CRYMQ14894 314 aa11.63□□□□□ -0.55
FN1-217ENST00000471193 TMEM52BQ4KMG9 183 aa11.63□□□□□ -0.55
FN1-217ENST00000471193 UBAP2Q5T6F2 1119 aaKnown RBP11.63□□□□□ -0.55
FN1-217ENST00000471193 TSTD2Q5T7W7 516 aa11.63□□□□□ -0.55
FN1-217ENST00000471193 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.63□□□□□ -0.55
FN1-217ENST00000471193 UNC5AQ6ZN44 842 aa11.63□□□□□ -0.55
FN1-217ENST00000471193 NLRP9Q7RTR0 991 aa11.63□□□□□ -0.55
FN1-217ENST00000471193 TMEM135Q86UB9 458 aa11.63□□□□□ -0.55
FN1-217ENST00000471193 CAMKK1Q8N5S9 505 aa11.63□□□□□ -0.55
FN1-217ENST00000471193 OR13J1Q8NGT2 312 aa11.63□□□□□ -0.55
FN1-217ENST00000471193 HNRNPLLQ8WVV9 542 aaKnown RBP11.63□□□□□ -0.55
FN1-217ENST00000471193 PBXIP1Q96AQ6 731 aa11.63□□□□□ -0.55
FN1-217ENST00000471193 ZNF669Q96BR6 464 aaPredicted RBP11.63□□□□□ -0.55
FN1-217ENST00000471193 EID2BQ96D98 161 aa11.63□□□□□ -0.55
FN1-217ENST00000471193 CFAP36Q96G28 342 aa11.63□□□□□ -0.55
FN1-217ENST00000471193 ZNF778Q96MU6 729 aa11.63□□□□□ -0.55
FN1-217ENST00000471193 TTC25Q96NG3 672 aa11.63□□□□□ -0.55
FN1-217ENST00000471193 C19orf43Q9BQ61 176 aa11.63□□□□□ -0.55
FN1-217ENST00000471193 GPR63Q9BZJ6 419 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms