RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 CEP70Q8NHQ1 597 aa8.04□□□□□ -1.12
SMC4-212ENST00000470240 FAM45AQ8TCE6 357 aa8.04□□□□□ -1.12
SMC4-212ENST00000470240 SPPL2BQ8TCT7 592 aa8.04□□□□□ -1.12
SMC4-212ENST00000470240 AGR3Q8TD06 166 aa8.04□□□□□ -1.12
SMC4-212ENST00000470240 DLG3Q92796 817 aa8.04□□□□□ -1.12
SMC4-212ENST00000470240 PEX13Q92968 403 aa8.04□□□□□ -1.12
SMC4-212ENST00000470240 IMP4Q96G21 291 aaKnown RBP8.04□□□□□ -1.12
SMC4-212ENST00000470240 RPRD1AQ96P16 312 aaPredicted RBP8.04□□□□□ -1.12
SMC4-212ENST00000470240 TMEM209Q96SK2 561 aa8.04□□□□□ -1.12
SMC4-212ENST00000470240 ECSITQ9BQ95 431 aa8.04□□□□□ -1.12
SMC4-212ENST00000470240 MCMBPQ9BTE3 642 aa8.04□□□□□ -1.12
SMC4-212ENST00000470240 TRMOQ9BU70 441 aa8.04□□□□□ -1.12
SMC4-212ENST00000470240 POLR1EQ9GZS1 481 aaKnown RBP8.04□□□□□ -1.12
SMC4-212ENST00000470240 CCDC68Q9H2F9 335 aa8.04□□□□□ -1.12
SMC4-212ENST00000470240 POMKQ9H5K3 350 aa8.04□□□□□ -1.12
SMC4-212ENST00000470240 EFCAB1Q9HAE3 211 aa8.04□□□□□ -1.12
SMC4-212ENST00000470240 TREX1Q9NSU2 369 aa8.04□□□□□ -1.12
SMC4-212ENST00000470240 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.04□□□□□ -1.12
SMC4-212ENST00000470240 NEU3Q9UQ49 428 aa8.04□□□□□ -1.12
SMC4-212ENST00000470240 NUP205Q92621 2012 aa8.03□□□□□ -1.12
SMC4-212ENST00000470240 A0A088AWK7 358 aa8.03□□□□□ -1.12
SMC4-212ENST00000470240 LOC100653049A0A140TA62 436 aa8.03□□□□□ -1.12
SMC4-212ENST00000470240 SLC12A8A0AV02 714 aa8.03□□□□□ -1.12
SMC4-212ENST00000470240 F5H5T6 163 aa8.03□□□□□ -1.12
SMC4-212ENST00000470240 ZNF195O14628 629 aa8.03□□□□□ -1.12
SMC4-212ENST00000470240 AIM2O14862 343 aa8.03□□□□□ -1.12
SMC4-212ENST00000470240 GPC4O75487 556 aa8.03□□□□□ -1.12
SMC4-212ENST00000470240 KRT34O76011 436 aa8.03□□□□□ -1.12
SMC4-212ENST00000470240 IPO13O94829 963 aaKnown RBP8.03□□□□□ -1.12
SMC4-212ENST00000470240 TFEBP19484 476 aa8.03□□□□□ -1.12
SMC4-212ENST00000470240 ITGAXP20702 1163 aa8.03□□□□□ -1.12
SMC4-212ENST00000470240 OGNP20774 298 aaKnown RBP8.03□□□□□ -1.12
SMC4-212ENST00000470240 CALRP27797 417 aaKnown RBP8.03□□□□□ -1.12
SMC4-212ENST00000470240 OR1E1P30953 314 aa8.03□□□□□ -1.12
SMC4-212ENST00000470240 CPOXP36551 454 aa8.03□□□□□ -1.12
SMC4-212ENST00000470240 CD86P42081 329 aa8.03□□□□□ -1.12
SMC4-212ENST00000470240 LEPRP48357 1165 aaKnown RBP8.03□□□□□ -1.12
SMC4-212ENST00000470240 ARCN1P48444 511 aaKnown RBP8.03□□□□□ -1.12
SMC4-212ENST00000470240 IRX1P78414 480 aaPredicted RBP8.03□□□□□ -1.12
SMC4-212ENST00000470240 RING1Q06587 406 aa8.03□□□□□ -1.12
SMC4-212ENST00000470240 DSC1Q08554 894 aa8.03□□□□□ -1.12
SMC4-212ENST00000470240 EFEMP1Q12805 493 aa8.03□□□□□ -1.12
SMC4-212ENST00000470240 STX5Q13190 355 aa8.03□□□□□ -1.12
SMC4-212ENST00000470240 CSHL1Q14406 222 aa8.03□□□□□ -1.12
SMC4-212ENST00000470240 SQLEQ14534 574 aa8.03□□□□□ -1.12
SMC4-212ENST00000470240 RFTN1Q14699 578 aaPredicted RBP8.03□□□□□ -1.12
SMC4-212ENST00000470240 POLD3Q15054 466 aaPredicted RBP8.03□□□□□ -1.12
SMC4-212ENST00000470240 ACAP2Q15057 778 aa8.03□□□□□ -1.12
SMC4-212ENST00000470240 CNGA3Q16281 694 aa8.03□□□□□ -1.12
SMC4-212ENST00000470240 PDCD2Q16342 344 aaPredicted RBP8.03□□□□□ -1.12
SMC4-212ENST00000470240 MMEL1Q495T6 779 aa8.03□□□□□ -1.12
SMC4-212ENST00000470240 SLC9B1Q4ZJI4 515 aa8.03□□□□□ -1.12
SMC4-212ENST00000470240 MS4A13Q5J8X5 152 aa8.03□□□□□ -1.12
SMC4-212ENST00000470240 C10orf120Q5SQS8 335 aa8.03□□□□□ -1.12
SMC4-212ENST00000470240 RARS2Q5T160 578 aaKnown RBP8.03□□□□□ -1.12
SMC4-212ENST00000470240 VWA5B1Q5TIE3 1220 aa8.03□□□□□ -1.12
SMC4-212ENST00000470240 KDELC1Q6UW63 502 aa8.03□□□□□ -1.12
SMC4-212ENST00000470240 IZUMO2Q6UXV1 221 aa8.03□□□□□ -1.12
SMC4-212ENST00000470240 RANBP10Q6VN20 620 aa8.03□□□□□ -1.12
SMC4-212ENST00000470240 NAPRTQ6XQN6 538 aa8.03□□□□□ -1.12
SMC4-212ENST00000470240 MAVSQ7Z434 540 aa8.03□□□□□ -1.12
SMC4-212ENST00000470240 SCD5Q86SK9 330 aa8.03□□□□□ -1.12
SMC4-212ENST00000470240 SAPCD2Q86UD0 394 aa8.03□□□□□ -1.12
SMC4-212ENST00000470240 SNX32Q86XE0 403 aa8.03□□□□□ -1.12
SMC4-212ENST00000470240 TMEM126BQ8IUX1 230 aa8.03□□□□□ -1.12
SMC4-212ENST00000470240 DENND6AQ8IWF6 608 aa8.03□□□□□ -1.12
SMC4-212ENST00000470240 ST13P4Q8IZP2 240 aaPredicted RBP8.03□□□□□ -1.12
SMC4-212ENST00000470240 PGAM4Q8N0Y7 254 aa8.03□□□□□ -1.12
SMC4-212ENST00000470240 KLHDC9Q8NEP7 349 aa8.03□□□□□ -1.12
SMC4-212ENST00000470240 RIN3Q8TB24 985 aa8.03□□□□□ -1.12
SMC4-212ENST00000470240 ZSCAN18Q8TBC5 510 aaPredicted RBP8.03□□□□□ -1.12
SMC4-212ENST00000470240 DPF3Q92784 378 aa8.03□□□□□ -1.12
SMC4-212ENST00000470240 PPP2R3CQ969Q6 453 aa8.03□□□□□ -1.12
SMC4-212ENST00000470240 NXNL1Q96CM4 212 aa8.03□□□□□ -1.12
SMC4-212ENST00000470240 CCDC124Q96CT7 223 aaKnown RBP8.03□□□□□ -1.12
SMC4-212ENST00000470240 SPDL1Q96EA4 605 aa8.03□□□□□ -1.12
SMC4-212ENST00000470240 FEM1CQ96JP0 617 aa8.03□□□□□ -1.12
SMC4-212ENST00000470240 CLPTM1LQ96KA5 538 aa8.03□□□□□ -1.12
SMC4-212ENST00000470240 CEP295NLQ96MC4 621 aa8.03□□□□□ -1.12
SMC4-212ENST00000470240 ZNF599Q96NL3 588 aa8.03□□□□□ -1.12
SMC4-212ENST00000470240 C1QTNF1Q9BXJ1 281 aa8.03□□□□□ -1.12
SMC4-212ENST00000470240 MRPL9Q9BYD2 267 aaKnown RBP8.03□□□□□ -1.12
SMC4-212ENST00000470240 MRPL1Q9BYD6 325 aaKnown RBP8.03□□□□□ -1.12
SMC4-212ENST00000470240 SEZ6LQ9BYH1 1024 aa8.03□□□□□ -1.12
SMC4-212ENST00000470240 NUF2Q9BZD4 464 aa8.03□□□□□ -1.12
SMC4-212ENST00000470240 KLHL4Q9C0H6 718 aa8.03□□□□□ -1.12
SMC4-212ENST00000470240 FAM192AQ9GZU8 254 aa8.03□□□□□ -1.12
SMC4-212ENST00000470240 NACA2Q9H009 215 aa8.03□□□□□ -1.12
SMC4-212ENST00000470240 MFSD1Q9H3U5 465 aa8.03□□□□□ -1.12
SMC4-212ENST00000470240 PFDN4Q9NQP4 134 aa8.03□□□□□ -1.12
SMC4-212ENST00000470240 PRDM5Q9NQX1 630 aaPredicted RBP8.03□□□□□ -1.12
SMC4-212ENST00000470240 MPP6Q9NZW5 540 aa8.03□□□□□ -1.12
SMC4-212ENST00000470240 MARK1Q9P0L2 795 aa8.03□□□□□ -1.12
SMC4-212ENST00000470240 MARCH2Q9P0N8 246 aa8.03□□□□□ -1.12
SMC4-212ENST00000470240 C6orf203Q9P0P8 240 aaPredicted RBP8.03□□□□□ -1.12
SMC4-212ENST00000470240 GMIPQ9P107 970 aa8.03□□□□□ -1.12
SMC4-212ENST00000470240 VPS28Q9UK41 221 aa8.03□□□□□ -1.12
SMC4-212ENST00000470240 LRFN2Q9ULH4 789 aa8.03□□□□□ -1.12
SMC4-212ENST00000470240 PRG3Q9Y2Y8 225 aaPredicted RBP8.03□□□□□ -1.12
SMC4-212ENST00000470240 FRMPD3Q5JV73 1810 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms