RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 PRPF18Q99633 342 aaKnown RBP13.69□□□□□ -0.22
BRCA1-209ENST00000470026 COQ10BQ9H8M1 238 aa13.69□□□□□ -0.22
BRCA1-209ENST00000470026 ZNF408Q9H9D4 720 aa13.69□□□□□ -0.22
BRCA1-209ENST00000470026 POLR3BQ9NW08 1133 aaPredicted RBP13.69□□□□□ -0.22
BRCA1-209ENST00000470026 TMEM248Q9NWD8 314 aa13.69□□□□□ -0.22
BRCA1-209ENST00000470026 APPL1Q9UKG1 709 aa13.69□□□□□ -0.22
BRCA1-209ENST00000470026 FIS1Q9Y3D6 152 aa13.69□□□□□ -0.22
BRCA1-209ENST00000470026 IGLV3-10A0A075B6K4 115 aa13.69□□□□□ -0.22
BRCA1-209ENST00000470026 A0A1B0GVG6 124 aa13.69□□□□□ -0.22
BRCA1-209ENST00000470026 MYADML2A6NDP7 307 aa13.69□□□□□ -0.22
BRCA1-209ENST00000470026 ATXN1LP0C7T5 689 aaKnown RBP13.69□□□□□ -0.22
BRCA1-209ENST00000470026 PSMC3P17980 439 aa13.69□□□□□ -0.22
BRCA1-209ENST00000470026 FDXRP22570 491 aa13.69□□□□□ -0.22
BRCA1-209ENST00000470026 CD86P42081 329 aa13.69□□□□□ -0.22
BRCA1-209ENST00000470026 RPS6KA3P51812 740 aa13.69□□□□□ -0.22
BRCA1-209ENST00000470026 HERVK_113P63132 956 aa13.69□□□□□ -0.22
BRCA1-209ENST00000470026 TIAL1Q01085 375 aaKnown RBP eCLIP13.69□□□□□ -0.22
BRCA1-209ENST00000470026 MAP7Q14244 749 aa13.69□□□□□ -0.22
BRCA1-209ENST00000470026 PAN2Q504Q3 1202 aaKnown RBP13.69□□□□□ -0.22
BRCA1-209ENST00000470026 HMBOX1Q6NT76 420 aa13.69□□□□□ -0.22
BRCA1-209ENST00000470026 HERC6Q8IVU3 1022 aa13.69□□□□□ -0.22
BRCA1-209ENST00000470026 ANKFN1Q8N957 763 aa13.69□□□□□ -0.22
BRCA1-209ENST00000470026 ZFP28Q8NHY6 868 aa13.69□□□□□ -0.22
BRCA1-209ENST00000470026 ARRDC2Q8TBH0 407 aa13.69□□□□□ -0.22
BRCA1-209ENST00000470026 LRTOMTQ8WZ04 291 aa13.69□□□□□ -0.22
BRCA1-209ENST00000470026 PTERQ96BW5 349 aa13.69□□□□□ -0.22
BRCA1-209ENST00000470026 NMD3Q96D46 503 aaKnown RBP13.69□□□□□ -0.22
BRCA1-209ENST00000470026 PHF21BQ96EK2 531 aa13.69□□□□□ -0.22
BRCA1-209ENST00000470026 HMCESQ96FZ2 354 aa13.69□□□□□ -0.22
BRCA1-209ENST00000470026 ASB2Q96Q27 587 aa13.69□□□□□ -0.22
BRCA1-209ENST00000470026 CYP2S1Q96SQ9 504 aa13.69□□□□□ -0.22
BRCA1-209ENST00000470026 ERVK-6Q9BXR3 956 aa13.69□□□□□ -0.22
BRCA1-209ENST00000470026 NT5MQ9NPB1 228 aa13.69□□□□□ -0.22
BRCA1-209ENST00000470026 ARMC1Q9NVT9 282 aa13.69□□□□□ -0.22
BRCA1-209ENST00000470026 ABCD2Q9UBJ2 740 aa13.69□□□□□ -0.22
BRCA1-209ENST00000470026 CPA4Q9UI42 421 aa13.69□□□□□ -0.22
BRCA1-209ENST00000470026 A0A0U1RQF3 1178 aa13.68□□□□□ -0.22
BRCA1-209ENST00000470026 A0A1W2PQH9 124 aa13.68□□□□□ -0.22
BRCA1-209ENST00000470026 J3KR12 359 aa13.68□□□□□ -0.22
BRCA1-209ENST00000470026 LDB2O43679 373 aa13.68□□□□□ -0.22
BRCA1-209ENST00000470026 MGEA5O60502 916 aa13.68□□□□□ -0.22
BRCA1-209ENST00000470026 SRP72O76094 671 aaKnown RBP13.68□□□□□ -0.22
BRCA1-209ENST00000470026 POMCP01189 267 aa13.68□□□□□ -0.22
BRCA1-209ENST00000470026 MYCNP04198 464 aaPredicted RBP13.68□□□□□ -0.22
BRCA1-209ENST00000470026 ALDOCP09972 364 aaKnown RBP13.68□□□□□ -0.22
BRCA1-209ENST00000470026 HOXB8P17481 243 aaPredicted RBP13.68□□□□□ -0.22
BRCA1-209ENST00000470026 YWHAQP27348 245 aa13.68□□□□□ -0.22
BRCA1-209ENST00000470026 SLC10A7Q0GE19 358 aa13.68□□□□□ -0.22
BRCA1-209ENST00000470026 RALGDSQ12967 914 aa13.68□□□□□ -0.22
BRCA1-209ENST00000470026 PABPC1LQ4VXU2 614 aaKnown RBP13.68□□□□□ -0.22
BRCA1-209ENST00000470026 GPR158Q5T848 1215 aa13.68□□□□□ -0.22
BRCA1-209ENST00000470026 MARC1Q5VT66 337 aa13.68□□□□□ -0.22
BRCA1-209ENST00000470026 IYDQ6PHW0 289 aa13.68□□□□□ -0.22
BRCA1-209ENST00000470026 PTAR1Q7Z6K3 402 aaPredicted RBP13.68□□□□□ -0.22
BRCA1-209ENST00000470026 CLYBLQ8N0X4 340 aa13.68□□□□□ -0.22
BRCA1-209ENST00000470026 GPR150Q8NGU9 434 aa13.68□□□□□ -0.22
BRCA1-209ENST00000470026 HDAC10Q969S8 669 aa13.68□□□□□ -0.22
BRCA1-209ENST00000470026 ZUFSPQ96AP4 578 aa13.68□□□□□ -0.22
BRCA1-209ENST00000470026 C19orf60Q96EN9 201 aa13.68□□□□□ -0.22
BRCA1-209ENST00000470026 C3orf30Q96M34 536 aa13.68□□□□□ -0.22
BRCA1-209ENST00000470026 MTG1Q9BT17 334 aaPredicted RBP13.68□□□□□ -0.22
BRCA1-209ENST00000470026 GRIP2Q9C0E4 1043 aa13.68□□□□□ -0.22
BRCA1-209ENST00000470026 ALG9Q9H6U8 611 aa13.68□□□□□ -0.22
BRCA1-209ENST00000470026 POPDC3Q9HBV1 291 aa13.68□□□□□ -0.22
BRCA1-209ENST00000470026 MARCH4Q9P2E8 410 aaPredicted RBP13.68□□□□□ -0.22
BRCA1-209ENST00000470026 SCML2Q9UQR0 700 aa13.68□□□□□ -0.22
BRCA1-209ENST00000470026 MTF2Q9Y483 593 aaPredicted RBP13.68□□□□□ -0.22
BRCA1-209ENST00000470026 ARHGEF37A1IGU5 675 aa13.67□□□□□ -0.22
BRCA1-209ENST00000470026 TNPO2O14787 897 aaKnown RBP13.67□□□□□ -0.22
BRCA1-209ENST00000470026 INPPL1O15357 1258 aa13.67□□□□□ -0.22
BRCA1-209ENST00000470026 MOCS2O96007 188 aaPredicted RBP13.67□□□□□ -0.22
BRCA1-209ENST00000470026 ASLP04424 464 aa13.67□□□□□ -0.22
BRCA1-209ENST00000470026 ITGB1P05556 798 aa13.67□□□□□ -0.22
BRCA1-209ENST00000470026 HAPLN1P10915 354 aaPredicted RBP13.67□□□□□ -0.22
BRCA1-209ENST00000470026 SLC2A3P11169 496 aa13.67□□□□□ -0.22
BRCA1-209ENST00000470026 BMP2P12643 396 aa13.67□□□□□ -0.22
BRCA1-209ENST00000470026 CD1DP15813 335 aa13.67□□□□□ -0.22
BRCA1-209ENST00000470026 GRIK1P39086 918 aa13.67□□□□□ -0.22
BRCA1-209ENST00000470026 DSC2Q02487 901 aa13.67□□□□□ -0.22
BRCA1-209ENST00000470026 BTG3Q14201 252 aaPredicted RBP13.67□□□□□ -0.22
BRCA1-209ENST00000470026 SIRPB2Q5JXA9 342 aa13.67□□□□□ -0.22
BRCA1-209ENST00000470026 RETREG3Q86VR2 466 aa13.67□□□□□ -0.22
BRCA1-209ENST00000470026 SPATA2LQ8IUW3 424 aaPredicted RBP13.67□□□□□ -0.22
BRCA1-209ENST00000470026 PHYKPLQ8IUZ5 450 aa13.67□□□□□ -0.22
BRCA1-209ENST00000470026 OR9I1Q8NGQ6 314 aa13.67□□□□□ -0.22
BRCA1-209ENST00000470026 SH3RF2Q8TEC5 729 aa13.67□□□□□ -0.22
BRCA1-209ENST00000470026 CNOT6Q9ULM6 557 aaKnown RBP13.67□□□□□ -0.22
BRCA1-209ENST00000470026 GLTPD2A6NH11 291 aa13.67□□□□□ -0.22
BRCA1-209ENST00000470026 DUSP11O75319 330 aaKnown RBP13.67□□□□□ -0.22
BRCA1-209ENST00000470026 SUPT7LO94864 414 aa13.67□□□□□ -0.22
BRCA1-209ENST00000470026 RPLP2P05387 115 aaKnown RBP13.67□□□□□ -0.22
BRCA1-209ENST00000470026 CTSHP09668 335 aa13.67□□□□□ -0.22
BRCA1-209ENST00000470026 ALDH3B2P48448 385 aa13.67□□□□□ -0.22
BRCA1-209ENST00000470026 MAXP61244 160 aa13.67□□□□□ -0.22
BRCA1-209ENST00000470026 SH3BP2P78314 561 aa13.67□□□□□ -0.22
BRCA1-209ENST00000470026 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.67□□□□□ -0.22
BRCA1-209ENST00000470026 MS4A13Q5J8X5 152 aa13.67□□□□□ -0.22
BRCA1-209ENST00000470026 CLEC6AQ6EIG7 209 aa13.67□□□□□ -0.22
BRCA1-209ENST00000470026 PPP4R4Q6NUP7 873 aa13.67□□□□□ -0.22
BRCA1-209ENST00000470026 ZNF549Q6P9A3 640 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms