RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 VPS41P49754 854 aa17.78■□□□□ 0.44
MRPL28-208ENST00000469744 CCNHP51946 323 aaPredicted RBP17.78■□□□□ 0.44
MRPL28-208ENST00000469744 CDH6P55285 790 aa17.78■□□□□ 0.44
MRPL28-208ENST00000469744 GPS1Q13098 491 aa17.78■□□□□ 0.44
MRPL28-208ENST00000469744 CBLBQ13191 982 aa17.78■□□□□ 0.44
MRPL28-208ENST00000469744 DPYSL3Q14195 570 aa17.78■□□□□ 0.44
MRPL28-208ENST00000469744 POLD3Q15054 466 aaPredicted RBP17.78■□□□□ 0.44
MRPL28-208ENST00000469744 NOMO1Q15155 1222 aa17.78■□□□□ 0.44
MRPL28-208ENST00000469744 TRIP6Q15654 476 aaKnown RBP17.78■□□□□ 0.44
MRPL28-208ENST00000469744 DNAJC21Q5F1R6 531 aaKnown RBP17.78■□□□□ 0.44
MRPL28-208ENST00000469744 RNASEH2BQ5TBB1 312 aaKnown RBP17.78■□□□□ 0.44
MRPL28-208ENST00000469744 PCDH20Q8N6Y1 951 aaKnown RBP17.78■□□□□ 0.44
MRPL28-208ENST00000469744 RTL3Q8N8U3 475 aaKnown RBP17.78■□□□□ 0.44
MRPL28-208ENST00000469744 NETO2Q8NC67 525 aa17.78■□□□□ 0.44
MRPL28-208ENST00000469744 TMIEQ8NEW7 156 aa17.78■□□□□ 0.44
MRPL28-208ENST00000469744 FAF2Q96CS3 445 aa17.78■□□□□ 0.44
MRPL28-208ENST00000469744 RNF157Q96PX1 679 aa17.78■□□□□ 0.44
MRPL28-208ENST00000469744 MYOCQ99972 504 aa17.78■□□□□ 0.44
MRPL28-208ENST00000469744 CEP44Q9C0F1 390 aa17.78■□□□□ 0.44
MRPL28-208ENST00000469744 KLC2Q9H0B6 622 aa17.78■□□□□ 0.44
MRPL28-208ENST00000469744 MAGEH1Q9H213 219 aa17.78■□□□□ 0.44
MRPL28-208ENST00000469744 ZDHHC6Q9H6R6 413 aa17.78■□□□□ 0.44
MRPL28-208ENST00000469744 NINJ2Q9NZG7 142 aa17.78■□□□□ 0.44
MRPL28-208ENST00000469744 WASF3Q9UPY6 502 aa17.78■□□□□ 0.44
MRPL28-208ENST00000469744 CA5BQ9Y2D0 317 aa17.78■□□□□ 0.44
MRPL28-208ENST00000469744 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.77■□□□□ 0.44
MRPL28-208ENST00000469744 A0A1W2PR77 199 aa17.77■□□□□ 0.44
MRPL28-208ENST00000469744 CD48P09326 243 aa17.77■□□□□ 0.44
MRPL28-208ENST00000469744 LSP1P33241 339 aa17.77■□□□□ 0.44
MRPL28-208ENST00000469744 HNRNPH2P55795 449 aaKnown RBP17.77■□□□□ 0.44
MRPL28-208ENST00000469744 SLC20A2Q08357 652 aa17.77■□□□□ 0.44
MRPL28-208ENST00000469744 KRT81Q14533 505 aa17.77■□□□□ 0.44
MRPL28-208ENST00000469744 STAT4Q14765 748 aa17.77■□□□□ 0.44
MRPL28-208ENST00000469744 CARD16Q5EG05 197 aa17.77■□□□□ 0.44
MRPL28-208ENST00000469744 RYBPQ8N488 228 aaPredicted RBP17.77■□□□□ 0.44
MRPL28-208ENST00000469744 EPAS1Q99814 870 aa17.77■□□□□ 0.44
MRPL28-208ENST00000469744 CCDC77Q9BR77 488 aa17.77■□□□□ 0.44
MRPL28-208ENST00000469744 ZNF670Q9BS34 389 aa17.77■□□□□ 0.44
MRPL28-208ENST00000469744 SCNM1Q9BWG6 230 aa17.77■□□□□ 0.44
MRPL28-208ENST00000469744 EPN3Q9H201 632 aa17.77■□□□□ 0.44
MRPL28-208ENST00000469744 KDM4CQ9H3R0 1056 aa17.77■□□□□ 0.44
MRPL28-208ENST00000469744 PPCSQ9HAB8 311 aa17.77■□□□□ 0.44
MRPL28-208ENST00000469744 DYRK4Q9NR20 520 aa17.77■□□□□ 0.44
MRPL28-208ENST00000469744 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.77■□□□□ 0.44
MRPL28-208ENST00000469744 PCOLCE2Q9UKZ9 415 aa17.77■□□□□ 0.44
MRPL28-208ENST00000469744 CACNA1BQ00975 2339 aa17.77■□□□□ 0.43
MRPL28-208ENST00000469744 CFAP69A5D8W1 941 aa17.76■□□□□ 0.43
MRPL28-208ENST00000469744 RNGTTO60942 597 aaKnown RBP17.76■□□□□ 0.43
MRPL28-208ENST00000469744 CBFA2T3O75081 653 aa17.76■□□□□ 0.43
MRPL28-208ENST00000469744 HPDP32754 393 aaPredicted RBP17.76■□□□□ 0.43
MRPL28-208ENST00000469744 MAGEA4P43358 317 aa17.76■□□□□ 0.43
MRPL28-208ENST00000469744 CCT8P50990 548 aa17.76■□□□□ 0.43
MRPL28-208ENST00000469744 EIF3EP60228 445 aaKnown RBP17.76■□□□□ 0.43
MRPL28-208ENST00000469744 CA9Q16790 459 aa17.76■□□□□ 0.43
MRPL28-208ENST00000469744 ZNF423Q2M1K9 1284 aa17.76■□□□□ 0.43
MRPL28-208ENST00000469744 NAPEPLDQ6IQ20 393 aa17.76■□□□□ 0.43
MRPL28-208ENST00000469744 ERN2Q76MJ5 926 aaKnown RBP17.76■□□□□ 0.43
MRPL28-208ENST00000469744 PRPF39Q86UA1 669 aaKnown RBP17.76■□□□□ 0.43
MRPL28-208ENST00000469744 TRIM69Q86WT6 500 aa17.76■□□□□ 0.43
MRPL28-208ENST00000469744 PSTKQ8IV42 348 aaKnown RBP17.76■□□□□ 0.43
MRPL28-208ENST00000469744 RIBC1Q8N443 379 aaPredicted RBP17.76■□□□□ 0.43
MRPL28-208ENST00000469744 PNPLA1Q8N8W4 532 aa17.76■□□□□ 0.43
MRPL28-208ENST00000469744 HMCESQ96FZ2 354 aa17.76■□□□□ 0.43
MRPL28-208ENST00000469744 HEPHQ9BQS7 1158 aa17.76■□□□□ 0.43
MRPL28-208ENST00000469744 TMEM121Q9BTD3 319 aa17.76■□□□□ 0.43
MRPL28-208ENST00000469744 CALN1Q9BXU9 219 aa17.76■□□□□ 0.43
MRPL28-208ENST00000469744 HECAQ9UBI9 543 aaPredicted RBP17.76■□□□□ 0.43
MRPL28-208ENST00000469744 AP4E1Q9UPM8 1137 aa17.76■□□□□ 0.43
MRPL28-208ENST00000469744 A0A1W2PQU0 124 aa17.75■□□□□ 0.43
MRPL28-208ENST00000469744 SLC31A1O15431 190 aa17.75■□□□□ 0.43
MRPL28-208ENST00000469744 ZFXP17010 805 aaPredicted RBP17.75■□□□□ 0.43
MRPL28-208ENST00000469744 MMP13P45452 471 aa17.75■□□□□ 0.43
MRPL28-208ENST00000469744 ATXN7L2Q5T6C5 722 aaPredicted RBP17.75■□□□□ 0.43
MRPL28-208ENST00000469744 SLC9A4Q6AI14 798 aa17.75■□□□□ 0.43
MRPL28-208ENST00000469744 TAOK1Q7L7X3 1001 aa17.75■□□□□ 0.43
MRPL28-208ENST00000469744 PPIL6Q8IXY8 311 aa17.75■□□□□ 0.43
MRPL28-208ENST00000469744 GLIS1Q8NBF1 620 aa17.75■□□□□ 0.43
MRPL28-208ENST00000469744 RHBDD1Q8TEB9 315 aa17.75■□□□□ 0.43
MRPL28-208ENST00000469744 HAUS1Q96CS2 278 aa17.75■□□□□ 0.43
MRPL28-208ENST00000469744 RBM15Q96T37 977 aaKnown RBP eCLIP17.75■□□□□ 0.432e-6■■□□□ 13.2
MRPL28-208ENST00000469744 DHX35Q9H5Z1 703 aaKnown RBP17.75■□□□□ 0.43
MRPL28-208ENST00000469744 RETREG1Q9H6L5 497 aa17.75■□□□□ 0.43
MRPL28-208ENST00000469744 PCDH18Q9HCL0 1135 aa17.75■□□□□ 0.43
MRPL28-208ENST00000469744 PREBQ9HCU5 417 aa17.75■□□□□ 0.43
MRPL28-208ENST00000469744 FZD3Q9NPG1 666 aa17.75■□□□□ 0.43
MRPL28-208ENST00000469744 LGALS13Q9UHV8 139 aa17.75■□□□□ 0.43
MRPL28-208ENST00000469744 PCDHGB2Q9Y5G2 931 aa17.75■□□□□ 0.43
MRPL28-208ENST00000469744 TRPM6Q9BX84 2022 aa17.75■□□□□ 0.43
MRPL28-208ENST00000469744 KMT2BQ9UMN6 2715 aaPredicted RBP17.75■□□□□ 0.43
MRPL28-208ENST00000469744 TLDC2A0PJX2 215 aa17.75■□□□□ 0.43
MRPL28-208ENST00000469744 RASA4BC9J798 803 aa17.75■□□□□ 0.43
MRPL28-208ENST00000469744 FLRT2O43155 660 aa17.75■□□□□ 0.43
MRPL28-208ENST00000469744 RASA4O43374 803 aa17.75■□□□□ 0.43
MRPL28-208ENST00000469744 KDELR3O43731 214 aa17.75■□□□□ 0.43
MRPL28-208ENST00000469744 TMCC1O94876 653 aa17.75■□□□□ 0.43
MRPL28-208ENST00000469744 PCDH8O95206 1070 aa17.75■□□□□ 0.43
MRPL28-208ENST00000469744 FTH1P19P0C7X4 201 aa17.75■□□□□ 0.43
MRPL28-208ENST00000469744 ZSCAN5DPP0CG00 497 aa17.75■□□□□ 0.43
MRPL28-208ENST00000469744 RBP3P10745 1247 aa17.75■□□□□ 0.43
MRPL28-208ENST00000469744 TSHRP16473 764 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms