RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 RPH3AQ9Y2J0 694 aaPredicted RBP9.99□□□□□ -0.81
NUP50-214ENST00000469163 TRIP12Q14669 1992 aaPredicted RBP9.99□□□□□ -0.81
NUP50-214ENST00000469163 IGKV6D-21A0A0A0MT36 114 aa9.99□□□□□ -0.81
NUP50-214ENST00000469163 PODXLO00592 558 aa9.99□□□□□ -0.81
NUP50-214ENST00000469163 ENDOD1O94919 500 aa9.99□□□□□ -0.81
NUP50-214ENST00000469163 DLGAP3O95886 979 aa9.99□□□□□ -0.81
NUP50-214ENST00000469163 ALDH7A1P49419 539 aaKnown RBP9.99□□□□□ -0.81
NUP50-214ENST00000469163 CRYBB1P53674 252 aaPredicted RBP9.99□□□□□ -0.81
NUP50-214ENST00000469163 NRLP54845 237 aa9.99□□□□□ -0.81
NUP50-214ENST00000469163 PLD1Q13393 1074 aa9.99□□□□□ -0.81
NUP50-214ENST00000469163 RAB6CQ53S08 254 aa9.99□□□□□ -0.81
NUP50-214ENST00000469163 TMEM26Q6ZUK4 368 aa9.99□□□□□ -0.81
NUP50-214ENST00000469163 BTN2A1Q7KYR7 527 aa9.99□□□□□ -0.81
NUP50-214ENST00000469163 SLC22A16Q86VW1 577 aa9.99□□□□□ -0.81
NUP50-214ENST00000469163 METTL23Q86XA0 190 aa9.99□□□□□ -0.81
NUP50-214ENST00000469163 TP53I13Q8NBR0 393 aaPredicted RBP9.99□□□□□ -0.81
NUP50-214ENST00000469163 GRPEL2Q8TAA5 225 aa9.99□□□□□ -0.81
NUP50-214ENST00000469163 VANGL1Q8TAA9 524 aaPredicted RBP9.99□□□□□ -0.81
NUP50-214ENST00000469163 SEC14L1Q92503 715 aa9.99□□□□□ -0.81
NUP50-214ENST00000469163 NELL1Q92832 810 aa9.99□□□□□ -0.81
NUP50-214ENST00000469163 RMND5BQ96G75 393 aaPredicted RBP9.99□□□□□ -0.81
NUP50-214ENST00000469163 MFSD14AQ96MC6 490 aa9.99□□□□□ -0.81
NUP50-214ENST00000469163 C1QTNF7Q9BXJ2 289 aa9.99□□□□□ -0.81
NUP50-214ENST00000469163 SLC4A5Q9BY07 1137 aa9.99□□□□□ -0.81
NUP50-214ENST00000469163 RAB6CQ9H0N0 254 aa9.99□□□□□ -0.81
NUP50-214ENST00000469163 RMND5AQ9H871 391 aa9.99□□□□□ -0.81
NUP50-214ENST00000469163 SIRT5Q9NXA8 310 aa9.99□□□□□ -0.81
NUP50-214ENST00000469163 SFMBT1Q9UHJ3 866 aa9.99□□□□□ -0.81
NUP50-214ENST00000469163 PMF1-BGLAPU3KQ54 211 aa9.99□□□□□ -0.81
NUP50-214ENST00000469163 EVPLLA8MZ36 301 aa9.99□□□□□ -0.81
NUP50-214ENST00000469163 MIF4GDA9UHW6 222 aaKnown RBP9.99□□□□□ -0.81
NUP50-214ENST00000469163 H3BMQ9 156 aa9.99□□□□□ -0.81
NUP50-214ENST00000469163 KIAA0391O15091 583 aaKnown RBP9.99□□□□□ -0.81
NUP50-214ENST00000469163 KCNH1O95259 989 aa9.99□□□□□ -0.81
NUP50-214ENST00000469163 OLFM2O95897 454 aa9.99□□□□□ -0.81
NUP50-214ENST00000469163 USP17L7P0C7H9 530 aa9.99□□□□□ -0.81
NUP50-214ENST00000469163 CKBP12277 381 aa9.99□□□□□ -0.81
NUP50-214ENST00000469163 C1QTNF8P60827 252 aa9.99□□□□□ -0.81
NUP50-214ENST00000469163 MAPRE2Q15555 327 aa9.99□□□□□ -0.81
NUP50-214ENST00000469163 PDK4Q16654 411 aa9.99□□□□□ -0.81
NUP50-214ENST00000469163 SLC39A12Q504Y0 691 aa9.99□□□□□ -0.81
NUP50-214ENST00000469163 ANKRD26P1Q6NSI1 321 aa9.99□□□□□ -0.81
NUP50-214ENST00000469163 HMBOX1Q6NT76 420 aa9.99□□□□□ -0.81
NUP50-214ENST00000469163 BEND5Q7L4P6 421 aa9.99□□□□□ -0.81
NUP50-214ENST00000469163 ZC3H7AQ8IWR0 971 aaKnown RBP9.99□□□□□ -0.81
NUP50-214ENST00000469163 BBS7Q8IWZ6 715 aa9.99□□□□□ -0.81
NUP50-214ENST00000469163 GALNT12Q8IXK2 581 aa9.99□□□□□ -0.81
NUP50-214ENST00000469163 C7orf61Q8IZ16 206 aa9.99□□□□□ -0.81
NUP50-214ENST00000469163 TTC17Q96AE7 1141 aa9.99□□□□□ -0.81
NUP50-214ENST00000469163 SGK3Q96BR1 496 aa9.99□□□□□ -0.81
NUP50-214ENST00000469163 TMEM176AQ96HP8 235 aa9.99□□□□□ -0.81
NUP50-214ENST00000469163 PIWIL1Q96J94 861 aaKnown RBP9.99□□□□□ -0.81
NUP50-214ENST00000469163 COG8Q96MW5 612 aa9.99□□□□□ -0.81
NUP50-214ENST00000469163 MAGEB5Q9BZ81 275 aa9.99□□□□□ -0.81
NUP50-214ENST00000469163 PITHD1Q9GZP4 211 aaPredicted RBP9.99□□□□□ -0.81
NUP50-214ENST00000469163 KATNBL1Q9H079 304 aa9.99□□□□□ -0.81
NUP50-214ENST00000469163 SDCBP2Q9H190 292 aa9.99□□□□□ -0.81
NUP50-214ENST00000469163 RPF2Q9H7B2 306 aaKnown RBP9.99□□□□□ -0.81
NUP50-214ENST00000469163 PDLIM7Q9NR12 457 aa9.99□□□□□ -0.81
NUP50-214ENST00000469163 TMPRSS4Q9NRS4 437 aa9.99□□□□□ -0.81
NUP50-214ENST00000469163 RIC8BQ9NVN3 520 aa9.99□□□□□ -0.81
NUP50-214ENST00000469163 SENP1Q9P0U3 644 aa9.99□□□□□ -0.81
NUP50-214ENST00000469163 SIX4Q9UIU6 781 aa9.99□□□□□ -0.81
NUP50-214ENST00000469163 COG5Q9UP83 839 aa9.99□□□□□ -0.81
NUP50-214ENST00000469163 TRPC5OSA6NMA1 111 aa9.98□□□□□ -0.81
NUP50-214ENST00000469163 DYRK3O43781 588 aa9.98□□□□□ -0.81
NUP50-214ENST00000469163 GAS2O43903 313 aaKnown RBP9.98□□□□□ -0.81
NUP50-214ENST00000469163 FGF18O76093 207 aa9.98□□□□□ -0.81
NUP50-214ENST00000469163 INHBBP09529 407 aa9.98□□□□□ -0.81
NUP50-214ENST00000469163 RPL9P32969 192 aaKnown RBP9.98□□□□□ -0.81
NUP50-214ENST00000469163 SLC25A3Q00325 362 aa9.98□□□□□ -0.81
NUP50-214ENST00000469163 VAC14Q08AM6 782 aa9.98□□□□□ -0.81
NUP50-214ENST00000469163 ADIGQ0VDE8 80 aa9.98□□□□□ -0.81
NUP50-214ENST00000469163 SCRN3Q0VDG4 424 aa9.98□□□□□ -0.81
NUP50-214ENST00000469163 ZNF677Q86XU0 584 aa9.98□□□□□ -0.81
NUP50-214ENST00000469163 HERC6Q8IVU3 1022 aa9.98□□□□□ -0.81
NUP50-214ENST00000469163 ASB12Q8WXK4 309 aa9.98□□□□□ -0.81
NUP50-214ENST00000469163 TMEM209Q96SK2 561 aa9.98□□□□□ -0.81
NUP50-214ENST00000469163 ELOVL4Q9GZR5 314 aa9.98□□□□□ -0.81
NUP50-214ENST00000469163 TMEM134Q9H6X4 195 aa9.98□□□□□ -0.81
NUP50-214ENST00000469163 FNIP2Q9P278 1114 aa9.98□□□□□ -0.81
NUP50-214ENST00000469163 REV1Q9UBZ9 1251 aa9.98□□□□□ -0.81
NUP50-214ENST00000469163 UBQLN1Q9UMX0 589 aaKnown RBP9.98□□□□□ -0.81
NUP50-214ENST00000469163 B3GNT3Q9Y2A9 372 aa9.98□□□□□ -0.81
NUP50-214ENST00000469163 KIAA1217Q5T5P2 1943 aa9.98□□□□□ -0.81
NUP50-214ENST00000469163 SMIM35A0A1B0GVV1 85 aa9.98□□□□□ -0.81
NUP50-214ENST00000469163 MYBPHLA2RUH7 354 aa9.98□□□□□ -0.81
NUP50-214ENST00000469163 SGK1O00141 431 aa9.98□□□□□ -0.81
NUP50-214ENST00000469163 DNALI1O14645 258 aaPredicted RBP9.98□□□□□ -0.81
NUP50-214ENST00000469163 NCAM1P13591 858 aa9.98□□□□□ -0.81
NUP50-214ENST00000469163 EN2P19622 333 aaPredicted RBP9.98□□□□□ -0.81
NUP50-214ENST00000469163 ATP5OP48047 213 aa9.98□□□□□ -0.81
NUP50-214ENST00000469163 HCAR3P49019 387 aa9.98□□□□□ -0.81
NUP50-214ENST00000469163 RAD23AP54725 363 aa9.98□□□□□ -0.81
NUP50-214ENST00000469163 CDK16Q00536 496 aa9.98□□□□□ -0.81
NUP50-214ENST00000469163 RFTN1Q14699 578 aaPredicted RBP9.98□□□□□ -0.81
NUP50-214ENST00000469163 NRF1Q16656 503 aa9.98□□□□□ -0.81
NUP50-214ENST00000469163 C5orf22Q49AR2 442 aa9.98□□□□□ -0.81
NUP50-214ENST00000469163 ALYREFQ86V81 257 aaKnown RBP9.98□□□□□ -0.81
NUP50-214ENST00000469163 CCDC103Q8IW40 242 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms