RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 ECHDC3Q96DC8 303 aa14.57□□□□□ -0.08
COL27A1-203ENST00000468565 IFT43Q96FT9 208 aa14.57□□□□□ -0.08
COL27A1-203ENST00000468565 RUFY1Q96T51 708 aa14.57□□□□□ -0.08
COL27A1-203ENST00000468565 NAP1L3Q99457 506 aaPredicted RBP14.57□□□□□ -0.08
COL27A1-203ENST00000468565 TOR4AQ9NXH8 423 aa14.57□□□□□ -0.08
COL27A1-203ENST00000468565 FTSJ1Q9UET6 329 aa14.57□□□□□ -0.08
COL27A1-203ENST00000468565 FPGTO14772 594 aa14.56□□□□□ -0.08
COL27A1-203ENST00000468565 RAD51BO15315 384 aa14.56□□□□□ -0.08
COL27A1-203ENST00000468565 HYAL3O43820 417 aaPredicted RBP14.56□□□□□ -0.08
COL27A1-203ENST00000468565 TM7SF2O76062 418 aa14.56□□□□□ -0.08
COL27A1-203ENST00000468565 RABIFP47224 123 aa14.56□□□□□ -0.08
COL27A1-203ENST00000468565 LMAN1P49257 510 aa14.56□□□□□ -0.08
COL27A1-203ENST00000468565 BCL2L1Q07817 233 aa14.56□□□□□ -0.08
COL27A1-203ENST00000468565 MMRN1Q13201 1228 aa14.56□□□□□ -0.08
COL27A1-203ENST00000468565 ZNF235Q14590 738 aa14.56□□□□□ -0.08
COL27A1-203ENST00000468565 PAFAH1B3Q15102 231 aaKnown RBP14.56□□□□□ -0.08
COL27A1-203ENST00000468565 ATP13A4Q4VNC1 1196 aa14.56□□□□□ -0.08
COL27A1-203ENST00000468565 LRRC73Q5JTD7 316 aa14.56□□□□□ -0.08
COL27A1-203ENST00000468565 C11orf63Q6NUN7 778 aa14.56□□□□□ -0.08
COL27A1-203ENST00000468565 Q6ZSR6 202 aa14.56□□□□□ -0.08
COL27A1-203ENST00000468565 PTAR1Q7Z6K3 402 aaPredicted RBP14.56□□□□□ -0.08
COL27A1-203ENST00000468565 SLCO6A1Q86UG4 719 aa14.56□□□□□ -0.08
COL27A1-203ENST00000468565 CAMK1DQ8IU85 385 aa14.56□□□□□ -0.08
COL27A1-203ENST00000468565 BBS5Q8N3I7 341 aa14.56□□□□□ -0.08
COL27A1-203ENST00000468565 KCTD6Q8NC69 237 aa14.56□□□□□ -0.08
COL27A1-203ENST00000468565 FAF2Q96CS3 445 aa14.56□□□□□ -0.08
COL27A1-203ENST00000468565 C1QTNF7Q9BXJ2 289 aa14.56□□□□□ -0.08
COL27A1-203ENST00000468565 CALN1Q9BXU9 219 aa14.56□□□□□ -0.08
COL27A1-203ENST00000468565 MAP1BP46821 2468 aaKnown RBP14.56□□□□□ -0.08
COL27A1-203ENST00000468565 FAM221BA6H8Z2 402 aa14.56□□□□□ -0.08
COL27A1-203ENST00000468565 POM121BA6NF01 834 aa14.56□□□□□ -0.08
COL27A1-203ENST00000468565 ERICH4A6NGS2 130 aa14.56□□□□□ -0.08
COL27A1-203ENST00000468565 MIF4GDA9UHW6 222 aaKnown RBP14.56□□□□□ -0.08
COL27A1-203ENST00000468565 MUSKO15146 869 aa14.56□□□□□ -0.08
COL27A1-203ENST00000468565 DDX3YO15523 660 aaKnown RBP14.56□□□□□ -0.08
COL27A1-203ENST00000468565 GJC1P36383 396 aa14.56□□□□□ -0.08
COL27A1-203ENST00000468565 CARSP49589 748 aaKnown RBP14.56□□□□□ -0.08
COL27A1-203ENST00000468565 BNIP3Q12983 259 aa14.56□□□□□ -0.08
COL27A1-203ENST00000468565 CUL1Q13616 776 aa14.56□□□□□ -0.08
COL27A1-203ENST00000468565 PPP2R5EQ16537 467 aa14.56□□□□□ -0.08
COL27A1-203ENST00000468565 ANKRD20A8PQ5CZ79 823 aa14.56□□□□□ -0.08
COL27A1-203ENST00000468565 RALGPS1Q5JS13 557 aa14.56□□□□□ -0.08
COL27A1-203ENST00000468565 ERAP2Q6P179 960 aa14.56□□□□□ -0.08
COL27A1-203ENST00000468565 ZSWIM9Q86XI8 627 aa14.56□□□□□ -0.08
COL27A1-203ENST00000468565 NSMCE1Q8WV22 266 aa14.56□□□□□ -0.08
COL27A1-203ENST00000468565 CENPTQ96BT3 561 aa14.56□□□□□ -0.08
COL27A1-203ENST00000468565 CARD9Q9H257 536 aa14.56□□□□□ -0.08
COL27A1-203ENST00000468565 NFU1Q9UMS0 254 aa14.56□□□□□ -0.08
COL27A1-203ENST00000468565 CEP295Q9C0D2 2601 aa14.55□□□□□ -0.08
COL27A1-203ENST00000468565 SPEGQ15772 3267 aa14.55□□□□□ -0.08
COL27A1-203ENST00000468565 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.55□□□□□ -0.08
COL27A1-203ENST00000468565 GOLGA8KD6RF30 607 aa14.55□□□□□ -0.08
COL27A1-203ENST00000468565 AGPSO00116 658 aa14.55□□□□□ -0.08
COL27A1-203ENST00000468565 TRAFD1O14545 582 aaPredicted RBP14.55□□□□□ -0.08
COL27A1-203ENST00000468565 TOR1BO14657 336 aa14.55□□□□□ -0.08
COL27A1-203ENST00000468565 MMP20O60882 483 aa14.55□□□□□ -0.08
COL27A1-203ENST00000468565 ATXN1LP0C7T5 689 aaKnown RBP14.55□□□□□ -0.08
COL27A1-203ENST00000468565 CR2P20023 1033 aa14.55□□□□□ -0.08
COL27A1-203ENST00000468565 SPINK2P20155 84 aa14.55□□□□□ -0.08
COL27A1-203ENST00000468565 SCNN1BP51168 640 aa14.55□□□□□ -0.08
COL27A1-203ENST00000468565 MESDQ14696 234 aa14.55□□□□□ -0.08
COL27A1-203ENST00000468565 NCBP2-AS2Q69YL0 99 aa14.55□□□□□ -0.08
COL27A1-203ENST00000468565 MAATS1Q7Z4T9 603 aa14.55□□□□□ -0.08
COL27A1-203ENST00000468565 CHCHD4Q8N4Q1 142 aa14.55□□□□□ -0.08
COL27A1-203ENST00000468565 MREGQ8N565 214 aa14.55□□□□□ -0.08
COL27A1-203ENST00000468565 PCDH19Q8TAB3 1148 aa14.55□□□□□ -0.08
COL27A1-203ENST00000468565 ZBTB9Q96C00 473 aa14.55□□□□□ -0.08
COL27A1-203ENST00000468565 NUDCD1Q96RS6 583 aa14.55□□□□□ -0.08
COL27A1-203ENST00000468565 MGME1Q9BQP7 344 aa14.55□□□□□ -0.08
COL27A1-203ENST00000468565 AP1M1Q9BXS5 423 aa14.55□□□□□ -0.08
COL27A1-203ENST00000468565 PCDH12Q9NPG4 1184 aa14.55□□□□□ -0.08
COL27A1-203ENST00000468565 ATP8A1Q9Y2Q0 1164 aa14.55□□□□□ -0.08
COL27A1-203ENST00000468565 MSRB2Q9Y3D2 182 aa14.55□□□□□ -0.08
COL27A1-203ENST00000468565 LRP4O75096 1905 aa14.55□□□□□ -0.08
COL27A1-203ENST00000468565 SPTY2D1-AS1A0A0U1RR47 76 aa14.54□□□□□ -0.08
COL27A1-203ENST00000468565 A0A1W2PQ67 120 aa14.54□□□□□ -0.08
COL27A1-203ENST00000468565 CFAP69A5D8W1 941 aa14.54□□□□□ -0.08
COL27A1-203ENST00000468565 TMEM110-MUSTN1A8MSY1 372 aa14.54□□□□□ -0.08
COL27A1-203ENST00000468565 ZNF487B1APH4 448 aa14.54□□□□□ -0.08
COL27A1-203ENST00000468565 MFSD11O43934 449 aa14.54□□□□□ -0.08
COL27A1-203ENST00000468565 SOCS5O75159 536 aa14.54□□□□□ -0.08
COL27A1-203ENST00000468565 ITIH2P19823 946 aa14.54□□□□□ -0.08
COL27A1-203ENST00000468565 MMP12P39900 470 aa14.54□□□□□ -0.08
COL27A1-203ENST00000468565 PFN3P60673 137 aa14.54□□□□□ -0.08
COL27A1-203ENST00000468565 POLR2LP62875 67 aaKnown RBP14.54□□□□□ -0.08
COL27A1-203ENST00000468565 GALNT2Q10471 571 aa14.54□□□□□ -0.08
COL27A1-203ENST00000468565 VSIG1Q86XK7 387 aa14.54□□□□□ -0.08
COL27A1-203ENST00000468565 EID2Q8N6I1 236 aa14.54□□□□□ -0.08
COL27A1-203ENST00000468565 UBL4BQ8N7F7 174 aa14.54□□□□□ -0.08
COL27A1-203ENST00000468565 PNPLA1Q8N8W4 532 aa14.54□□□□□ -0.08
COL27A1-203ENST00000468565 CNDP2Q96KP4 475 aaKnown RBP14.54□□□□□ -0.08
COL27A1-203ENST00000468565 WRAP53Q9BUR4 548 aaKnown RBP14.54□□□□□ -0.08
COL27A1-203ENST00000468565 KLK13Q9UKR3 277 aa14.54□□□□□ -0.08
COL27A1-203ENST00000468565 GOLGA4Q13439 2230 aaKnown RBP14.54□□□□□ -0.08
COL27A1-203ENST00000468565 GOLGA6L10A0A0M3HER8 536 aa14.54□□□□□ -0.08
COL27A1-203ENST00000468565 ESYT3A0FGR9 886 aa14.54□□□□□ -0.08
COL27A1-203ENST00000468565 LDOC1O95751 146 aaPredicted RBP14.54□□□□□ -0.08
COL27A1-203ENST00000468565 KDELR1P24390 212 aa14.54□□□□□ -0.08
COL27A1-203ENST00000468565 IGFALSP35858 605 aa14.54□□□□□ -0.08
COL27A1-203ENST00000468565 GARSP41250 739 aaKnown RBP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms